| Definition | Edwardsiella ictaluri 93-146 chromosome, complete genome. |
|---|---|
| Accession | NC_012779 |
| Length | 3,812,315 |
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The map label for this gene is motA [H]
Identifier: 238919360
GI number: 238919360
Start: 1430599
End: 1431504
Strand: Direct
Name: motA [H]
Synonym: NT01EI_1454
Alternate gene names: 238919360
Gene position: 1430599-1431504 (Clockwise)
Preceding gene: 238919359
Following gene: 238919361
Centisome position: 37.53
GC content: 55.63
Gene sequence:
>906_bases GTGCTGATTCTACTGGGATATGCCGTTGTGCTAATCGCGGTTTTTGGCGGTTACACGCTTGTTGGGGGCCATCTGGGAGC GTTGTATCAGCCATCTGAGTTATTGATTATTGGGGGAGCGGGCATCGGCGCTTTCATCGTAGGCAATAATGGCAAGGCGA TTAAGTCGACGCTGCGAACCCTGCCCAGGCTTGCCCGCGGCTCTAAGTACAACAAGGCGTTGTATATGGATGTGATGGGG CTGATGTATCAGCTTCTGGCCAAATCGCGTCAGCAGGGCATGCTGACCCTGGAGCGTGATATCGAAGATCCTAAAGAGAG CGAAATTTTTTCTAATTATCCCCGTCTGATTGCCGATAACACACTCATTGAGTTTATTACCGACTATATGCGACTGATCA TCAGCGGCAACATGAATGCCTTTGAGATCGAATCCCTGATGGACGAAGAGATCGAGACCTTCGAACAGGAGGCCGAGGTG CCGGCCGGCAGCCTGGCGGCGGTCGGTGACTCTCTGCCGGCGTTCGGTATCGTAGCGGCGGTGATGGGGGTTGTACATGC CCTGGCTTCGGCCGATCGCCCCGCGGCAGAGCTGGGGGCGCTGATCGCCCATGCCATGGTCGGGACGTTTCTGGGTATCC TGCTGGCCTATGGATTTATCTCCCCTCTGGCTTCGCTGATGCGTCAGAAGAGCGCCGAAACCGCCAAAATGATGCACTGC ATTAAGACGACGCTGCTCTCCAGTCTGAACGGCTATGCCCCGCAGATTGCGGTGGAGTTTGGCCGTAAGACACTGTACTC CACCGAGCGACCGTCATTTCTTGAGCTGGAAGAGCATGTGCGTCAGGTGAAATACCCGGCGAAACAGGCGGCAACGGAAC AGGCGGCAACGGAAGACGAAGTATGA
Upstream 100 bases:
>100_bases GCGCTGTCTTCGGGCACATTCTGTCATCGACCTTCTTCTTTCCGGCCCTGGGCCGGCAGATTACATCCGACTGTTCACTC CGATCATGTAAGGAATTCAC
Downstream 100 bases:
>100_bases AGGGCGGTAAACAACCGGTCATTCTGGTCAAAAAGAAACGCAGCAGTCACGCTCAGGCCAGCCATGGTGGTTCCTGGAAG ATAGCCTATGCCGATTTTAT
Product: flagellar motor protein MotA
Products: NA
Alternate protein names: Chemotaxis protein MotA [H]
Number of amino acids: Translated: 301; Mature: 301
Protein sequence:
>301_residues MLILLGYAVVLIAVFGGYTLVGGHLGALYQPSELLIIGGAGIGAFIVGNNGKAIKSTLRTLPRLARGSKYNKALYMDVMG LMYQLLAKSRQQGMLTLERDIEDPKESEIFSNYPRLIADNTLIEFITDYMRLIISGNMNAFEIESLMDEEIETFEQEAEV PAGSLAAVGDSLPAFGIVAAVMGVVHALASADRPAAELGALIAHAMVGTFLGILLAYGFISPLASLMRQKSAETAKMMHC IKTTLLSSLNGYAPQIAVEFGRKTLYSTERPSFLELEEHVRQVKYPAKQAATEQAATEDEV
Sequences:
>Translated_301_residues MLILLGYAVVLIAVFGGYTLVGGHLGALYQPSELLIIGGAGIGAFIVGNNGKAIKSTLRTLPRLARGSKYNKALYMDVMG LMYQLLAKSRQQGMLTLERDIEDPKESEIFSNYPRLIADNTLIEFITDYMRLIISGNMNAFEIESLMDEEIETFEQEAEV PAGSLAAVGDSLPAFGIVAAVMGVVHALASADRPAAELGALIAHAMVGTFLGILLAYGFISPLASLMRQKSAETAKMMHC IKTTLLSSLNGYAPQIAVEFGRKTLYSTERPSFLELEEHVRQVKYPAKQAATEQAATEDEV >Mature_301_residues MLILLGYAVVLIAVFGGYTLVGGHLGALYQPSELLIIGGAGIGAFIVGNNGKAIKSTLRTLPRLARGSKYNKALYMDVMG LMYQLLAKSRQQGMLTLERDIEDPKESEIFSNYPRLIADNTLIEFITDYMRLIISGNMNAFEIESLMDEEIETFEQEAEV PAGSLAAVGDSLPAFGIVAAVMGVVHALASADRPAAELGALIAHAMVGTFLGILLAYGFISPLASLMRQKSAETAKMMHC IKTTLLSSLNGYAPQIAVEFGRKTLYSTERPSFLELEEHVRQVKYPAKQAATEQAATEDEV
Specific function: MotA and MotB comprise the stator element of the flagellar motor complex. Required for rotation of the flagellar motor. Probable transmembrane proton channel. Overexpression of MotA, with or without MotB, restores motility in a yhjH disruption, (a c-di-GM
COG id: COG1291
COG function: function code N; Flagellar motor component
Gene ontology:
Cell location: Cell inner membrane; Multi-pass membrane protein [H]
Metaboloic importance: Non_Essential [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the MotA family [H]
Homologues:
Organism=Escherichia coli, GI1788199, Length=295, Percent_Identity=77.2881355932203, Blast_Score=476, Evalue=1e-135,
Paralogues:
None
Copy number: 10-20 (rich media) [C]
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR000540 - InterPro: IPR022522 - InterPro: IPR002898 [H]
Pfam domain/function: PF01618 MotA_ExbB [H]
EC number: NA
Molecular weight: Translated: 32571; Mature: 32571
Theoretical pI: Translated: 4.90; Mature: 4.90
Prosite motif: PS01307 MOTA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.3 %Cys (Translated Protein) 4.3 %Met (Translated Protein) 4.7 %Cys+Met (Translated Protein) 0.3 %Cys (Mature Protein) 4.3 %Met (Mature Protein) 4.7 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MLILLGYAVVLIAVFGGYTLVGGHLGALYQPSELLIIGGAGIGAFIVGNNGKAIKSTLRT CEEHHHHHHHHHHHHHCHHHHCCCHHCCCCCCCEEEEECCCCEEEEECCCCHHHHHHHHH LPRLARGSKYNKALYMDVMGLMYQLLAKSRQQGMLTLERDIEDPKESEIFSNYPRLIADN HHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHCCCEEHHHCCCCCHHHHHHHHCCHHHHHH TLIEFITDYMRLIISGNMNAFEIESLMDEEIETFEQEAEVPAGSLAAVGDSLPAFGIVAA HHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHCCCCCHHHHHCCCCCHHHHHHH VMGVVHALASADRPAAELGALIAHAMVGTFLGILLAYGFISPLASLMRQKSAETAKMMHC HHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH IKTTLLSSLNGYAPQIAVEFGRKTLYSTERPSFLELEEHVRQVKYPAKQAATEQAATEDE HHHHHHHHHCCCCHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHCCHHHHHHHHHCCCCC V C >Mature Secondary Structure MLILLGYAVVLIAVFGGYTLVGGHLGALYQPSELLIIGGAGIGAFIVGNNGKAIKSTLRT CEEHHHHHHHHHHHHHCHHHHCCCHHCCCCCCCEEEEECCCCEEEEECCCCHHHHHHHHH LPRLARGSKYNKALYMDVMGLMYQLLAKSRQQGMLTLERDIEDPKESEIFSNYPRLIADN HHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHCCCEEHHHCCCCCHHHHHHHHCCHHHHHH TLIEFITDYMRLIISGNMNAFEIESLMDEEIETFEQEAEVPAGSLAAVGDSLPAFGIVAA HHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHCCCCCHHHHHCCCCCHHHHHHH VMGVVHALASADRPAAELGALIAHAMVGTFLGILLAYGFISPLASLMRQKSAETAKMMHC HHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH IKTTLLSSLNGYAPQIAVEFGRKTLYSTERPSFLELEEHVRQVKYPAKQAATEQAATEDE HHHHHHHHHCCCCHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHCCHHHHHHHHHCCCCC V C
PDB accession: NA
Resolution: NA
Structure class: Alpha
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 7.0
TargetDB status: NA
Availability: NA
References: 6090403; 9097040; 9278503; 3007435; 1719217; 7643400 [H]