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The map label for this gene is sxy [H]

Identifier: 238919304

GI number: 238919304

Start: 1383063

End: 1383686

Strand: Direct

Name: sxy [H]

Synonym: NT01EI_1394

Alternate gene names: 238919304

Gene position: 1383063-1383686 (Clockwise)

Preceding gene: 238919300

Following gene: 238919307

Centisome position: 36.28

GC content: 61.54

Gene sequence:

>624_bases
ATGAAAGGACTACAGGGTGAAAAGCATCGGGTGGCGGAGTCCCTGTTTGCCGCGCTGGGGCGGGTTTTGTTGCGATCTCA
GTTTGGTGGCCAGGGCGTATGGTGTGACGGGGTGATGTTTGCCCTGATTGCGGAGGGGGAGCTCTATCTACGGGCCCGCG
ATGCGCAGGGGCGCCACTGTGAGGATTGCGGAATGCAGCCGTTTATCTATACGAAGCGCGGTTTTCCTGTGCGCTTGGGC
TATTACCGGGTAGAGGAGGCCATATGGCAGCAGCCTCAGCGACTGGCCATCCTGTTGCAACGTTCGCTACAGCAGGCGCG
CAGCGACAACGACATCCGTCTGGCGGCGATGCGGCGGCTGCATACCCGTCCCAATATCTCGATCAATATGGAGCGACGTC
TGTATCGGATCGGTATCCGCTCGCTGGCCGATTTGAAGCGCGTCGGGGCAACCCAGGCCTTCAGCCAGTTAAAAGAGGCG
AATCACCAGGTGGGCGACCGGGTGCTGTTCGATCTGGAGGCGGCGGTGCAGGGATGTCATAGCGCGGTGCTGCCGCGTCC
GGTGAGCGAGGCGCTGCGCCAGTGGCTGCAGGGGAACGCACACCGCTGGCGCTACAAAAAGTAG

Upstream 100 bases:

>100_bases
GTGTATTGGGTGTTCCGGTTGAATTGGTTATGTTGCTAATGGTTATCCGTAGCGATCTGGTAACAGGTCATTGATTACAA
TGATTGTTAAGGAGATATGC

Downstream 100 bases:

>100_bases
TCGTCGGTGCGGTGCGCGCTCAGTGTTTAGGCCAACGAGGCCTTCAGGCGGGTCAGCTCGGGCAACAGATCCAGCATCAG
GCTGATCTGCTGCAGCACCA

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 207; Mature: 207

Protein sequence:

>207_residues
MKGLQGEKHRVAESLFAALGRVLLRSQFGGQGVWCDGVMFALIAEGELYLRARDAQGRHCEDCGMQPFIYTKRGFPVRLG
YYRVEEAIWQQPQRLAILLQRSLQQARSDNDIRLAAMRRLHTRPNISINMERRLYRIGIRSLADLKRVGATQAFSQLKEA
NHQVGDRVLFDLEAAVQGCHSAVLPRPVSEALRQWLQGNAHRWRYKK

Sequences:

>Translated_207_residues
MKGLQGEKHRVAESLFAALGRVLLRSQFGGQGVWCDGVMFALIAEGELYLRARDAQGRHCEDCGMQPFIYTKRGFPVRLG
YYRVEEAIWQQPQRLAILLQRSLQQARSDNDIRLAAMRRLHTRPNISINMERRLYRIGIRSLADLKRVGATQAFSQLKEA
NHQVGDRVLFDLEAAVQGCHSAVLPRPVSEALRQWLQGNAHRWRYKK
>Mature_207_residues
MKGLQGEKHRVAESLFAALGRVLLRSQFGGQGVWCDGVMFALIAEGELYLRARDAQGRHCEDCGMQPFIYTKRGFPVRLG
YYRVEEAIWQQPQRLAILLQRSLQQARSDNDIRLAAMRRLHTRPNISINMERRLYRIGIRSLADLKRVGATQAFSQLKEA
NHQVGDRVLFDLEAAVQGCHSAVLPRPVSEALRQWLQGNAHRWRYKK

Specific function: Unknown

COG id: COG3070

COG function: function code K; Regulator of competence-specific genes

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: To H.influenzae DNA transformation protein tfoX [H]

Homologues:

Organism=Escherichia coli, GI1787193, Length=195, Percent_Identity=33.3333333333333, Blast_Score=112, Evalue=2e-26,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR007077
- InterPro:   IPR007076 [H]

Pfam domain/function: PF04994 TfoX_C; PF04993 TfoX_N [H]

EC number: NA

Molecular weight: Translated: 23768; Mature: 23768

Theoretical pI: Translated: 10.80; Mature: 10.80

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.9 %Cys     (Translated Protein)
2.4 %Met     (Translated Protein)
4.3 %Cys+Met (Translated Protein)
1.9 %Cys     (Mature Protein)
2.4 %Met     (Mature Protein)
4.3 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MKGLQGEKHRVAESLFAALGRVLLRSQFGGQGVWCDGVMFALIAEGELYLRARDAQGRHC
CCCCCCHHHHHHHHHHHHHHHHHHHHHCCCCCEEHHHHHHHHHHCCEEEEEECCCCCCCH
EDCGMQPFIYTKRGFPVRLGYYRVEEAIWQQPQRLAILLQRSLQQARSDNDIRLAAMRRL
HHCCCCCEEEECCCCEEEEHHHHHHHHHHHCHHHHHHHHHHHHHHHCCCCCCHHHHHHHH
HTRPNISINMERRLYRIGIRSLADLKRVGATQAFSQLKEANHQVGDRVLFDLEAAVQGCH
HCCCCCEEEHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
SAVLPRPVSEALRQWLQGNAHRWRYKK
HHCCCCHHHHHHHHHHCCCCCCCCCCC
>Mature Secondary Structure
MKGLQGEKHRVAESLFAALGRVLLRSQFGGQGVWCDGVMFALIAEGELYLRARDAQGRHC
CCCCCCHHHHHHHHHHHHHHHHHHHHHCCCCCEEHHHHHHHHHHCCEEEEEECCCCCCCH
EDCGMQPFIYTKRGFPVRLGYYRVEEAIWQQPQRLAILLQRSLQQARSDNDIRLAAMRRL
HHCCCCCEEEECCCCEEEEHHHHHHHHHHHCHHHHHHHHHHHHHHHCCCCCCHHHHHHHH
HTRPNISINMERRLYRIGIRSLADLKRVGATQAFSQLKEANHQVGDRVLFDLEAAVQGCH
HCCCCCEEEHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
SAVLPRPVSEALRQWLQGNAHRWRYKK
HHCCCCHHHHHHHHHHCCCCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 8905232; 9278503 [H]