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The map label for this gene is flgF [H]

Identifier: 238919260

GI number: 238919260

Start: 1336204

End: 1336959

Strand: Direct

Name: flgF [H]

Synonym: NT01EI_1350

Alternate gene names: 238919260

Gene position: 1336204-1336959 (Clockwise)

Preceding gene: 238919259

Following gene: 238919261

Centisome position: 35.05

GC content: 61.64

Gene sequence:

>756_bases
ATGGATCATGCGATTTATACCGCGATGGATGCAGCCAGCCAGACGCTGAACCTGCAGGCCGTCGCGGCCAACAATATGGC
CAACTCCACCACCCCGGGTTTCCGGGCCCAGCTGGCAGCGATGCGTGCTGTGCCGGTGGACGGTGAATCGTTGGACACCC
GGACCCTGGTCACCGCATCGACGCCGATGAATGATCTGAGCATGGGGCGTTTTGACTATACCGGCCGTCCGCTGGATGTG
GCCCTGCAGCAGGATGGCTGGCTGGAACTGCAGATGTCCAATGGCACCGAGGCCTACACCCGGGACGGTAACCTGCAGAT
CAGTCCGGATGGGATGCTGACCGTTGAAGGTCACCCGGTGATGGGGGACAACGGGCCAATCTCCGTACCGGATCGGGCCC
AGCTGACCATTGCCGCCGACGGGACCATCACGGCTCTGGGGGCCGGGGATAACCCCAATGCCACCACCCAGATAGGGCGC
CTGAAGCTGGTGAAGGCCACGGCGAGCGAGGTGGTACACGGTGATGACGGACTGTTTCACCTGAGTGCGGAGGCCGAGCA
GAAGCGGGGTGCCAGCCTGCCGCTGGACCCGACGGTGAAGGTGATGCCGGGGGTGTTGGAGGGCAGTAACGTACAGCCGG
TTGAGGCGATGATCAGCATGATCAGCAACGCCCGCCGCTTTGAAATGCAGATGAAGGTCATCCGCAGTGTGGATGACAAC
GAACAGAAAGCCAATCAGCTGTTATCACTGAGCTAA

Upstream 100 bases:

>100_bases
CCATCAAGACGCAGGATCAGATCCTGCAGACGCTGGTCAACCTGCGTTAATTGTGGATGACAACCGCCCGCAGGCCGGGC
GGTATTGCGAGACGAGTTAA

Downstream 100 bases:

>100_bases
CAGTGCAGGAGTAATCATGATCCGATCACTATACATCGCCAAGACCGGGCTGGAAGCCCAGCAGACCAACATGGATGTGA
TCGCCAACAACCTGGCCAAC

Product: flagellar basal-body rod protein FlgF

Products: NA

Alternate protein names: Putative proximal rod protein [H]

Number of amino acids: Translated: 251; Mature: 251

Protein sequence:

>251_residues
MDHAIYTAMDAASQTLNLQAVAANNMANSTTPGFRAQLAAMRAVPVDGESLDTRTLVTASTPMNDLSMGRFDYTGRPLDV
ALQQDGWLELQMSNGTEAYTRDGNLQISPDGMLTVEGHPVMGDNGPISVPDRAQLTIAADGTITALGAGDNPNATTQIGR
LKLVKATASEVVHGDDGLFHLSAEAEQKRGASLPLDPTVKVMPGVLEGSNVQPVEAMISMISNARRFEMQMKVIRSVDDN
EQKANQLLSLS

Sequences:

>Translated_251_residues
MDHAIYTAMDAASQTLNLQAVAANNMANSTTPGFRAQLAAMRAVPVDGESLDTRTLVTASTPMNDLSMGRFDYTGRPLDV
ALQQDGWLELQMSNGTEAYTRDGNLQISPDGMLTVEGHPVMGDNGPISVPDRAQLTIAADGTITALGAGDNPNATTQIGR
LKLVKATASEVVHGDDGLFHLSAEAEQKRGASLPLDPTVKVMPGVLEGSNVQPVEAMISMISNARRFEMQMKVIRSVDDN
EQKANQLLSLS
>Mature_251_residues
MDHAIYTAMDAASQTLNLQAVAANNMANSTTPGFRAQLAAMRAVPVDGESLDTRTLVTASTPMNDLSMGRFDYTGRPLDV
ALQQDGWLELQMSNGTEAYTRDGNLQISPDGMLTVEGHPVMGDNGPISVPDRAQLTIAADGTITALGAGDNPNATTQIGR
LKLVKATASEVVHGDDGLFHLSAEAEQKRGASLPLDPTVKVMPGVLEGSNVQPVEAMISMISNARRFEMQMKVIRSVDDN
EQKANQLLSLS

Specific function: Unknown

COG id: COG4787

COG function: function code N; Flagellar basal body rod protein

Gene ontology:

Cell location: Bacterial flagellum basal body [H]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the flagella basal body rod proteins family [H]

Homologues:

Organism=Escherichia coli, GI1787317, Length=251, Percent_Identity=67.3306772908366, Blast_Score=345, Evalue=2e-96,
Organism=Escherichia coli, GI1787318, Length=268, Percent_Identity=28.3582089552239, Blast_Score=70, Evalue=2e-13,

Paralogues:

None

Copy number: 10-20 (rich media) [C]

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR010930
- InterPro:   IPR001444
- InterPro:   IPR019776
- InterPro:   IPR020013
- InterPro:   IPR012836 [H]

Pfam domain/function: PF06429 DUF1078; PF00460 Flg_bb_rod [H]

EC number: NA

Molecular weight: Translated: 26694; Mature: 26694

Theoretical pI: Translated: 4.42; Mature: 4.42

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
5.6 %Met     (Translated Protein)
5.6 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
5.6 %Met     (Mature Protein)
5.6 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MDHAIYTAMDAASQTLNLQAVAANNMANSTTPGFRAQLAAMRAVPVDGESLDTRTLVTAS
CCCHHEEHHHHHCCEEEEEEEEECCCCCCCCCCHHHHHHHHEECCCCCCCCCCEEEEEEC
TPMNDLSMGRFDYTGRPLDVALQQDGWLELQMSNGTEAYTRDGNLQISPDGMLTVEGHPV
CCCCCCCCCCCCCCCCCEEEEEECCCEEEEEECCCCEEEEECCCEEECCCCEEEECCCEE
MGDNGPISVPDRAQLTIAADGTITALGAGDNPNATTQIGRLKLVKATASEVVHGDDGLFH
ECCCCCCCCCCCCEEEEEECCEEEEEECCCCCCCCEEECEEEEEEEHHHHHEECCCCEEE
LSAEAEQKRGASLPLDPTVKVMPGVLEGSNVQPVEAMISMISNARRFEMQMKVIRSVDDN
EECCHHHHCCCCCCCCCCHHCCCCEECCCCCCHHHHHHHHHHCCHHHHHHHHHHHHCCCC
EQKANQLLSLS
HHHHHHHCCCC
>Mature Secondary Structure
MDHAIYTAMDAASQTLNLQAVAANNMANSTTPGFRAQLAAMRAVPVDGESLDTRTLVTAS
CCCHHEEHHHHHCCEEEEEEEEECCCCCCCCCCHHHHHHHHEECCCCCCCCCCEEEEEEC
TPMNDLSMGRFDYTGRPLDVALQQDGWLELQMSNGTEAYTRDGNLQISPDGMLTVEGHPV
CCCCCCCCCCCCCCCCCEEEEEECCCEEEEEECCCCEEEEECCCEEECCCCEEEECCCEE
MGDNGPISVPDRAQLTIAADGTITALGAGDNPNATTQIGRLKLVKATASEVVHGDDGLFH
ECCCCCCCCCCCCEEEEEECCEEEEEECCCCCCCCEEECEEEEEEEHHHHHEECCCCEEE
LSAEAEQKRGASLPLDPTVKVMPGVLEGSNVQPVEAMISMISNARRFEMQMKVIRSVDDN
EECCHHHHCCCCCCCCCCHHCCCCEECCCCCCHHHHHHHHHHCCHHHHHHHHHHHHCCCC
EQKANQLLSLS
HHHHHHHCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 2129540; 11677609; 2193164; 2181149 [H]