Definition Edwardsiella ictaluri 93-146 chromosome, complete genome.
Accession NC_012779
Length 3,812,315

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The map label for this gene is 238919046

Identifier: 238919046

GI number: 238919046

Start: 1109449

End: 1110087

Strand: Direct

Name: 238919046

Synonym: NT01EI_1114

Alternate gene names: NA

Gene position: 1109449-1110087 (Clockwise)

Preceding gene: 238919043

Following gene: 238919047

Centisome position: 29.1

GC content: 54.15

Gene sequence:

>639_bases
TTGGGGCGGCAGAAGTGGCTGTCAGGATTTCCAGAGCTGCTTACTGATGATTTTTCGTGTCATGCCTACTACATGGGGAT
TGATGTTATTCGAATCAACTCGGTTTTGTTAGCGGCTCTTAACCTGTCGCTACGCGCATTACAGGGCTTCGTTGACCCGA
TGTTTAAGCTGATGGGGCTGTCGTTGTATTGCCCGGATGACTCTCCCGTCAGCAGATGGGCAAAACGCGTGAACATCAGC
ATAAAGACGCCAGCCCGTGGCGTGATCTCGCACCACGTCATTGACAGTAGCGGTCTGAAAGTCTCCGGCGAAGGTGAATG
GAAAGTCCGGCAGCACGGAGCTGACAGGCACAGAGTGTGGCGCAGGCTTCATCTGGCCGCAGACAGTGAGACGCATGAAA
TTATCTGTGCCGGTTTATCACTCAGCGGGACGACAGATACTCAGGCACTGCCGGGACTCATAAGCCAGACCCACCGGAAA
ATCAGGGAAGCCTCAGCAGACGGAGCTTACGATACCCGTTACTGCCATGATGGGTTGCCGGGGAAAAAATCAGGCCACTT
ATACCGCCACGACACGGAGCGCAATATTGGCCTGACAGATACCCTGAGCGTAGCCATGCCATGGCAAATCAGCCTCTGA

Upstream 100 bases:

>100_bases
GCAAGCCCTCCCACGGTATCCCAGTCGTAAGGACAAACAGAATACCGTTGAGAACGGCATCGTCATCAAGGCGTGGGCGG
CCACACCGTGACGAAGGCTG

Downstream 100 bases:

>100_bases
GGGGCAGCAATGGTGTCTGGCAAAAGAAAGTGGGCTATCACCGGCGTTCGATAGCCGAAACGGCAATGTTCCGCATTGCA
AAACATGGCCGGGCGGCTAT

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 212; Mature: 211

Protein sequence:

>212_residues
MGRQKWLSGFPELLTDDFSCHAYYMGIDVIRINSVLLAALNLSLRALQGFVDPMFKLMGLSLYCPDDSPVSRWAKRVNIS
IKTPARGVISHHVIDSSGLKVSGEGEWKVRQHGADRHRVWRRLHLAADSETHEIICAGLSLSGTTDTQALPGLISQTHRK
IREASADGAYDTRYCHDGLPGKKSGHLYRHDTERNIGLTDTLSVAMPWQISL

Sequences:

>Translated_212_residues
MGRQKWLSGFPELLTDDFSCHAYYMGIDVIRINSVLLAALNLSLRALQGFVDPMFKLMGLSLYCPDDSPVSRWAKRVNIS
IKTPARGVISHHVIDSSGLKVSGEGEWKVRQHGADRHRVWRRLHLAADSETHEIICAGLSLSGTTDTQALPGLISQTHRK
IREASADGAYDTRYCHDGLPGKKSGHLYRHDTERNIGLTDTLSVAMPWQISL
>Mature_211_residues
GRQKWLSGFPELLTDDFSCHAYYMGIDVIRINSVLLAALNLSLRALQGFVDPMFKLMGLSLYCPDDSPVSRWAKRVNISI
KTPARGVISHHVIDSSGLKVSGEGEWKVRQHGADRHRVWRRLHLAADSETHEIICAGLSLSGTTDTQALPGLISQTHRKI
REASADGAYDTRYCHDGLPGKKSGHLYRHDTERNIGLTDTLSVAMPWQISL

Specific function: Required for transposition of transposon Tn903 [H]

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR002559 [H]

Pfam domain/function: PF01609 Transposase_11 [H]

EC number: NA

Molecular weight: Translated: 23603; Mature: 23472

Theoretical pI: Translated: 8.63; Mature: 8.63

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.9 %Cys     (Translated Protein)
2.4 %Met     (Translated Protein)
4.2 %Cys+Met (Translated Protein)
1.9 %Cys     (Mature Protein)
1.9 %Met     (Mature Protein)
3.8 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MGRQKWLSGFPELLTDDFSCHAYYMGIDVIRINSVLLAALNLSLRALQGFVDPMFKLMGL
CCHHHHHHCCHHHHCCCCCCEEEEEEEEEEHHHHHHHHHHHHHHHHHHHHHHHHHHHHCC
SLYCPDDSPVSRWAKRVNISIKTPARGVISHHVIDSSGLKVSGEGEWKVRQHGADRHRVW
EEECCCCCHHHHHHHHEEEEEECCCCHHHHHHEECCCCCEECCCCCEEHHHCCCHHHHHH
RRLHLAADSETHEIICAGLSLSGTTDTQALPGLISQTHRKIREASADGAYDTRYCHDGLP
HHHHHHCCCCCCEEEEECCCCCCCCCHHHHHHHHHHHHHHHHHHCCCCCCCCCHHCCCCC
GKKSGHLYRHDTERNIGLTDTLSVAMPWQISL
CCCCCCEEECCCCCCCCCCCEEEEECCEEECC
>Mature Secondary Structure 
GRQKWLSGFPELLTDDFSCHAYYMGIDVIRINSVLLAALNLSLRALQGFVDPMFKLMGL
CHHHHHHCCHHHHCCCCCCEEEEEEEEEEHHHHHHHHHHHHHHHHHHHHHHHHHHHHCC
SLYCPDDSPVSRWAKRVNISIKTPARGVISHHVIDSSGLKVSGEGEWKVRQHGADRHRVW
EEECCCCCHHHHHHHHEEEEEECCCCHHHHHHEECCCCCEECCCCCEEHHHCCCHHHHHH
RRLHLAADSETHEIICAGLSLSGTTDTQALPGLISQTHRKIREASADGAYDTRYCHDGLP
HHHHHHCCCCCCEEEEECCCCCCCCCHHHHHHHHHHHHHHHHHHCCCCCCCCCHHCCCCC
GKKSGHLYRHDTERNIGLTDTLSVAMPWQISL
CCCCCCEEECCCCCCCCCCCEEEEECCEEECC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 6270337; 6261245; 6271455 [H]