| Definition | Edwardsiella ictaluri 93-146 chromosome, complete genome. |
|---|---|
| Accession | NC_012779 |
| Length | 3,812,315 |
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The map label for this gene is thiL [H]
Identifier: 238918992
GI number: 238918992
Start: 1055858
End: 1056829
Strand: Direct
Name: thiL [H]
Synonym: NT01EI_1059
Alternate gene names: 238918992
Gene position: 1055858-1056829 (Clockwise)
Preceding gene: 238918991
Following gene: 238918993
Centisome position: 27.7
GC content: 63.48
Gene sequence:
>972_bases ATGGCACACGGTGAATTTGATCTGATAGCCCGTTACTTTAACCGTCGGTCTACCCCGCGACACGATGTCCAGCGTGGTAT CGGCGATGACTGTGCGCTGCTGTCTGTGTCGGAAAAACAGTGGGTGGCCGTCAGCAGCGATACGCTGGTCAGCGGCATTC ATTTTTTACCGGAGATTGATCCGGTCGATCTCGGCTATAAATCCCTGGCGGTAAACATCAGCGATTTGGCGGCGATGGGG GCTGATCCGGCCTGGGTATCACTGGCGCTGACCCTGCCCGCGGTGGACGAACCCTGGCTACAGGCCTTCAGCGATGCCCT GTTTGAGCAGTTAGACTACTACGGTATGCAGCTGATCGGGGGGGATACGACCCGCGGCCCGCTGAGCCTGACCTATACCG TTCAGGGATTGGTGCCGGCCGGCCGGGCGCTGCTGCGCAGCGGCGCCCGCGTGGGTGACTGGATCTATGTCACCGGGACG CTGGGTGACAGCGCAGCGGGGCTGGCGCTGCTGCAGGCGCGCCTGACGGTGGCCGATGAGGCCGATCGGCGCTATCTGCT CGGGCGCCATCTGCGCCCGCAGCCGCGGGTGCTACAGGGGCAGGCGCTGCGCGATCTGGCCAGCGCTGCCATCGATATTT CCGACGGGCTACTCGCCGATTTGGGGCATATCCTCAAGGCCAGCGACTGCGGGGCCAACCTGTATCTGGATAAGCTGCCG CTCTCGGCGGAGCTGATGTGCCACGTCGACGCCGAAACCTGCCAGCGCTGGGCACTGGGCGGTGGTGAAGACTATGAACT GTGCTTTACCGTGCCGGAGATGTACCGCGGCGCGCTGGATATGGCGCTCGCCCAGCTGGGGTGCCGCTATACCTGCATCG GGCAGATGGCTCCGGCGTCGGAGGGGGTATGCCTGTGGCGTGGGGAGCGTCAGGTGACGCTGGATATACAGGGGTTTGAT CACTTTGGCTAA
Upstream 100 bases:
>100_bases GTCGTCCGCCCGGCCTTATGGGGCCTGACAGCTATGCCACAGGCCGGTTCTCCGGCCTTTTTTTCGGCTGTGCGAACGAC CAGATCGCAGGAAACAAGCT
Downstream 100 bases:
>100_bases GATGACGAAGCAACAGCAGCGGGCGGCCAGGGCGCGCCTGCGTATGGGGAATCCCTGGCACCTGCTGGCGACCGGCTTTG GCAGCGGTTTGAGCCCACTG
Product: thiamine monophosphate kinase
Products: NA
Alternate protein names: Thiamine-phosphate kinase [H]
Number of amino acids: Translated: 323; Mature: 322
Protein sequence:
>323_residues MAHGEFDLIARYFNRRSTPRHDVQRGIGDDCALLSVSEKQWVAVSSDTLVSGIHFLPEIDPVDLGYKSLAVNISDLAAMG ADPAWVSLALTLPAVDEPWLQAFSDALFEQLDYYGMQLIGGDTTRGPLSLTYTVQGLVPAGRALLRSGARVGDWIYVTGT LGDSAAGLALLQARLTVADEADRRYLLGRHLRPQPRVLQGQALRDLASAAIDISDGLLADLGHILKASDCGANLYLDKLP LSAELMCHVDAETCQRWALGGGEDYELCFTVPEMYRGALDMALAQLGCRYTCIGQMAPASEGVCLWRGERQVTLDIQGFD HFG
Sequences:
>Translated_323_residues MAHGEFDLIARYFNRRSTPRHDVQRGIGDDCALLSVSEKQWVAVSSDTLVSGIHFLPEIDPVDLGYKSLAVNISDLAAMG ADPAWVSLALTLPAVDEPWLQAFSDALFEQLDYYGMQLIGGDTTRGPLSLTYTVQGLVPAGRALLRSGARVGDWIYVTGT LGDSAAGLALLQARLTVADEADRRYLLGRHLRPQPRVLQGQALRDLASAAIDISDGLLADLGHILKASDCGANLYLDKLP LSAELMCHVDAETCQRWALGGGEDYELCFTVPEMYRGALDMALAQLGCRYTCIGQMAPASEGVCLWRGERQVTLDIQGFD HFG >Mature_322_residues AHGEFDLIARYFNRRSTPRHDVQRGIGDDCALLSVSEKQWVAVSSDTLVSGIHFLPEIDPVDLGYKSLAVNISDLAAMGA DPAWVSLALTLPAVDEPWLQAFSDALFEQLDYYGMQLIGGDTTRGPLSLTYTVQGLVPAGRALLRSGARVGDWIYVTGTL GDSAAGLALLQARLTVADEADRRYLLGRHLRPQPRVLQGQALRDLASAAIDISDGLLADLGHILKASDCGANLYLDKLPL SAELMCHVDAETCQRWALGGGEDYELCFTVPEMYRGALDMALAQLGCRYTCIGQMAPASEGVCLWRGERQVTLDIQGFDH FG
Specific function: Thiamine biosynthesis. [C]
COG id: COG0611
COG function: function code H; Thiamine monophosphate kinase
Gene ontology:
Cell location: Cytoplasm [C]
Metaboloic importance: Unknown [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the thiamine-monophosphate kinase family [H]
Homologues:
Organism=Escherichia coli, GI1786619, Length=322, Percent_Identity=68.6335403726708, Blast_Score=448, Evalue=1e-127,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR000728 - InterPro: IPR010918 - InterPro: IPR016188 - InterPro: IPR006283 [H]
Pfam domain/function: PF00586 AIRS; PF02769 AIRS_C [H]
EC number: =2.7.4.16 [H]
Molecular weight: Translated: 35030; Mature: 34899
Theoretical pI: Translated: 4.52; Mature: 4.52
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
2.5 %Cys (Translated Protein) 2.2 %Met (Translated Protein) 4.6 %Cys+Met (Translated Protein) 2.5 %Cys (Mature Protein) 1.9 %Met (Mature Protein) 4.3 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MAHGEFDLIARYFNRRSTPRHDVQRGIGDDCALLSVSEKQWVAVSSDTLVSGIHFLPEID CCCCHHHHHHHHHHCCCCCHHHHHHCCCCCEEEEEECCCCEEEECCCHHHHHHHHCCCCC PVDLGYKSLAVNISDLAAMGADPAWVSLALTLPAVDEPWLQAFSDALFEQLDYYGMQLIG CCCCCHHHEEEEHHHHHHCCCCCCEEEEEEECCCCCCHHHHHHHHHHHHHHHHCCEEEEC GDTTRGPLSLTYTVQGLVPAGRALLRSGARVGDWIYVTGTLGDSAAGLALLQARLTVADE CCCCCCCEEEEEEEECCCHHHHHHHHCCCCCCCEEEEEECCCCCHHHHHHHHHHHHHCCC ADRRYLLGRHLRPQPRVLQGQALRDLASAAIDISDGLLADLGHILKASDCGANLYLDKLP CCHHHHHCCCCCCCCCCCCCHHHHHHHHHHCCCCCCHHHHHHHHHHCCCCCCEEEEECCC LSAELMCHVDAETCQRWALGGGEDYELCFTVPEMYRGALDMALAQLGCRYTCIGQMAPAS CCEEEEEEECHHHHHHHCCCCCCCEEEEEECHHHHHHHHHHHHHHHCCCEEEECCCCCCC EGVCLWRGERQVTLDIQGFDHFG CCEEEEECCEEEEEEECCCCCCC >Mature Secondary Structure AHGEFDLIARYFNRRSTPRHDVQRGIGDDCALLSVSEKQWVAVSSDTLVSGIHFLPEID CCCHHHHHHHHHHCCCCCHHHHHHCCCCCEEEEEECCCCEEEECCCHHHHHHHHCCCCC PVDLGYKSLAVNISDLAAMGADPAWVSLALTLPAVDEPWLQAFSDALFEQLDYYGMQLIG CCCCCHHHEEEEHHHHHHCCCCCCEEEEEEECCCCCCHHHHHHHHHHHHHHHHCCEEEEC GDTTRGPLSLTYTVQGLVPAGRALLRSGARVGDWIYVTGTLGDSAAGLALLQARLTVADE CCCCCCCEEEEEEEECCCHHHHHHHHCCCCCCCEEEEEECCCCCHHHHHHHHHHHHHCCC ADRRYLLGRHLRPQPRVLQGQALRDLASAAIDISDGLLADLGHILKASDCGANLYLDKLP CCHHHHHCCCCCCCCCCCCCHHHHHHHHHHCCCCCCHHHHHHHHHHCCCCCCEEEEECCC LSAELMCHVDAETCQRWALGGGEDYELCFTVPEMYRGALDMALAQLGCRYTCIGQMAPAS CCEEEEEEECHHHHHHHCCCCCCCEEEEEECHHHHHHHHHHHHHHHCCCEEEECCCCCCC EGVCLWRGERQVTLDIQGFDHFG CCEEEEECCEEEEEEECCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: 11677609 [H]