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The map label for this gene is rpmH

Identifier: 238917980

GI number: 238917980

Start: 2143543

End: 2143677

Strand: Reverse

Name: rpmH

Synonym: EUBELI_02070

Alternate gene names: 238917980

Gene position: 2143677-2143543 (Counterclockwise)

Preceding gene: NA

Following gene: 238917979

Centisome position: 99.98

GC content: 37.78

Gene sequence:

>135_bases
ATGAAGATGACATTTCAGCCAAAGAACAGACAGAGATCTAAGGTTCATGGATTCAGATCAAGAATGAGTACTGCAGGTGG
AAGAAAAGTTTTATCAGCAAGAAGAGCTAAGGGTAGAAAGAAACTTTCAGCTTAA

Upstream 100 bases:

>100_bases
ATGTTTACACAATATAATCAGTTCTGTGTTTTGAAATTTTTTATATGAAAATATTCTTACCATAATAAACTATAATGGTA
ATGAAGGAGGTGCATAGACT

Downstream 100 bases:

>100_bases
TTAATATTTTCTTGATTTTGTTGGCAGATGGGAGTTTCTCATCTGCTTTTTTCAGATTATAATAATATTTAATTAAAGTT
ACATTTTAATAATGAGAATG

Product: 50S ribosomal protein L34

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 44; Mature: 44

Protein sequence:

>44_residues
MKMTFQPKNRQRSKVHGFRSRMSTAGGRKVLSARRAKGRKKLSA

Sequences:

>Translated_44_residues
MKMTFQPKNRQRSKVHGFRSRMSTAGGRKVLSARRAKGRKKLSA
>Mature_44_residues
MKMTFQPKNRQRSKVHGFRSRMSTAGGRKVLSARRAKGRKKLSA

Specific function: Unknown

COG id: COG0230

COG function: function code J; Ribosomal protein L34

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: Belongs to the ribosomal protein L34P family

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): RL34_EUBE2 (C4Z5E3)

Other databases:

- EMBL:   CP001104
- RefSeq:   YP_002931497.1
- GeneID:   7956845
- GenomeReviews:   CP001104_GR
- KEGG:   eel:EUBELI_02070
- ProtClustDB:   PRK00399
- GO:   GO:0005840
- GO:   GO:0006412
- HAMAP:   MF_00391
- InterPro:   IPR000271
- InterPro:   IPR020939
- ProDom:   PD003101
- TIGRFAMs:   TIGR01030

Pfam domain/function: PF00468 Ribosomal_L34

EC number: NA

Molecular weight: Translated: 5032; Mature: 5032

Theoretical pI: Translated: 13.36; Mature: 13.36

Prosite motif: PS00784 RIBOSOMAL_L34

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
6.8 %Met     (Translated Protein)
6.8 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
6.8 %Met     (Mature Protein)
6.8 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MKMTFQPKNRQRSKVHGFRSRMSTAGGRKVLSARRAKGRKKLSA
CCCCCCCCCCCHHHHHHHHHHHHCCCCHHHHHHHHHHHHCCCCC
>Mature Secondary Structure
MKMTFQPKNRQRSKVHGFRSRMSTAGGRKVLSARRAKGRKKLSA
CCCCCCCCCCCHHHHHHHHHHHHCCCCHHHHHHHHHHHHCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA