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The map label for this gene is yidD [C]

Identifier: 238917978

GI number: 238917978

Start: 2142791

End: 2143072

Strand: Reverse

Name: yidD [C]

Synonym: EUBELI_02068

Alternate gene names: 238917978

Gene position: 2143072-2142791 (Counterclockwise)

Preceding gene: 238917979

Following gene: 238917977

Centisome position: 99.95

GC content: 35.82

Gene sequence:

>282_bases
ATGAAGGATATAAAGATTAAGTTAAAGAATGCGGGCAAGTTCATAGTTCTTAAGATGATAAGATTATATCAGCTCGCAAT
ATCTCCTTATAAGGGAGGAAAATACTGCAGCTTTATTCCAACATGTTCGCAATACGCGATTGAAGCTATTGAAATGTATG
GAGTTTTCTTAGGTGGGTGGTTGGCACTTAAAAGAATATTAAGGTGCAATCCATTTAATAAGAACGCTTATGGCTTTGAT
CCTGTGCCAGTAGGCAGATATGGGAAAAGAAAAAAGCAATAA

Upstream 100 bases:

>100_bases
GCCAGTTTGAAAGATAAGGGTTTTTTCGAAACTAAGGAATCAATGATTCATTTATTGAAACTTCATAAGCTTTATAAGCA
GGATTAAACAGGCGGTTAAT

Downstream 100 bases:

>100_bases
ACAACTGAATATATGGATAGTGCTATATTATGCGGAGGTGACAATTTGAGTATTATTAAGCCAATTGCACAGTTACTCGG
TTACATTTTAGACATCCTTT

Product: ribonuclease P

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 93; Mature: 93

Protein sequence:

>93_residues
MKDIKIKLKNAGKFIVLKMIRLYQLAISPYKGGKYCSFIPTCSQYAIEAIEMYGVFLGGWLALKRILRCNPFNKNAYGFD
PVPVGRYGKRKKQ

Sequences:

>Translated_93_residues
MKDIKIKLKNAGKFIVLKMIRLYQLAISPYKGGKYCSFIPTCSQYAIEAIEMYGVFLGGWLALKRILRCNPFNKNAYGFD
PVPVGRYGKRKKQ
>Mature_93_residues
MKDIKIKLKNAGKFIVLKMIRLYQLAISPYKGGKYCSFIPTCSQYAIEAIEMYGVFLGGWLALKRILRCNPFNKNAYGFD
PVPVGRYGKRKKQ

Specific function: Unknown

COG id: COG0759

COG function: function code S; Uncharacterized conserved protein

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the UPF0161 family [H]

Homologues:

Organism=Escherichia coli, GI87082322, Length=83, Percent_Identity=43.3734939759036, Blast_Score=79, Evalue=7e-17,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR002696
- ProDom:   PD004225 [H]

Pfam domain/function: PF01809 DUF37 [H]

EC number: NA

Molecular weight: Translated: 10670; Mature: 10670

Theoretical pI: Translated: 10.56; Mature: 10.56

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

3.2 %Cys     (Translated Protein)
3.2 %Met     (Translated Protein)
6.5 %Cys+Met (Translated Protein)
3.2 %Cys     (Mature Protein)
3.2 %Met     (Mature Protein)
6.5 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MKDIKIKLKNAGKFIVLKMIRLYQLAISPYKGGKYCSFIPTCSQYAIEAIEMYGVFLGGW
CCCEEEEECCCCCHHHHHHHHHHHHHHCCCCCCCEEEECCCHHHHHHHHHHHHHHHHHHH
LALKRILRCNPFNKNAYGFDPVPVGRYGKRKKQ
HHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCC
>Mature Secondary Structure
MKDIKIKLKNAGKFIVLKMIRLYQLAISPYKGGKYCSFIPTCSQYAIEAIEMYGVFLGGW
CCCEEEEECCCCCHHHHHHHHHHHHHHCCCCCCCEEEECCCHHHHHHHHHHHHHHHHHHH
LALKRILRCNPFNKNAYGFDPVPVGRYGKRKKQ
HHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 7542800 [H]