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The map label for this gene is mcpC [H]

Identifier: 238917961

GI number: 238917961

Start: 2121539

End: 2123689

Strand: Reverse

Name: mcpC [H]

Synonym: EUBELI_02051

Alternate gene names: 238917961

Gene position: 2123689-2121539 (Counterclockwise)

Preceding gene: 238917962

Following gene: 238917960

Centisome position: 99.04

GC content: 36.4

Gene sequence:

>2151_bases
ATGTGGTATTATAATACAAGGCATGTAAGAAATCGGAAATGTCAACTAAATATTATTAATTATAAACGAGGAGGGAAAGC
TATGAAGTTTTTCAGAAAATTAGGCTTTCAGCTTGTTTTATTTTTCGTTGTTGCCATTACAATTCCTATTGTAATGCTTA
TGGTAAGTTCAATTACAACAACTTCGTCTTCAATGGAAAATAACATGAAGGTAACAAGTGAGCAGACTTTGAATGAAGCA
CAGAATCAGTTTACTACATATCTTAAGACTCTGTCGCAGCCGGTAGACCTGCTTACAAGAAAGAATGAAGTAAAGCATCT
TGAGGATCAGGGAACTTTAGATGATAATGTTAAGGCAGTAAGAGATTCTCTTATTGCATCAGTAAAGGTTACTAATGGTG
CAGAAAGAGCTTTCTTTGCTACTAATACTAATCTTGAGATTACAGGTTGGGGAGAATATAACCCTGAGACCGGAAAAACA
CTTAGTAAGGGTGGCCTTGAGAAAGGTGTAGACAGAACTAAGGAAGTATGGTACACAGATTGTAAAGGTCTTAAGGCAAG
AAACAGCATTTATGCTTATTTTTCAAAGCCATATTACAGCAAGGATTTTGATAAGACAATAATTACTGTTTCACAGGAAA
TTAAGCATTCAGACGGAACGAATTATGGTATTGTGGGTATGCATATTGATTTTTCTGAGATTACAGATTTTGTACAGGGT
ATCGGACTTCTTAATACAGGATTTGTTGTCCTTGCAGATGAAGATGGTAATATACTTGTTAATAATGATAATAACAAGTA
TGTAACAGATTCAGTATCAGGACTGAATTGCTGGAGTACAGTTAAAGGTCTTACAGAGAATGATTATGATAAAGCATTTT
CATTTGATGAAAACATTAATGGTGAAAAGGTACATGTAGTAACATCTAAGGATGCTGTTACAGGATGGACACTTGTTGGT
TTTATCAGTTCTAAAGAAACATCTGCTACAACTAATAAGATGATTAGCAATACTGTTATATTCAGTATTATCGCATTTGT
TATTGGAATTGGTATTGCACTTGCAGTTACAGCTTCTATGACTAAGGAGATTAAGAAGGTTTCTGGACATATGAAGGATG
TTGCGGGTGGTGATTTAACAGATAGAATTGATGTAAAGAAGAAGAATGAGTTTGGAGACCTTGAGAATAACTTTAACAAC
ATGGTTGAGAACATGGCAGTTCTTATTAAGGGTGTTGAGGAAAAGAGTGGAGTTATAGTAGATGCATCTGCTAAGATTGC
AGGAGTATCTAAGTCTACTACAGAGACAGTAGGTCAGGTTTCAGAGGCTATACAGAGTGTTGCAGTTGGTGCATCAGGTC
AGGCAGACAGTACACAGACAGCAACACAGGAAGTAGAAAATCTTGCAGACAGATTAAAGGAAACTAAGGCTTATGTAACT
GATATCAGTGATATGTCTGTTGAAACACAGAAGTTAAGTAATAAGGGACTTACAATTGTTGATGAACTTATTACTAAGGG
ACAGCGTTCAATTGATAACTCTAAGATTTCTAAAGCAGTTGTATCTGAGATGGTAAGCAGTATAGAGAAGATTAATTTCA
TATCAGATGCCATTACAGAAATTACAGAGCAGACTAACCTGTTATCACTTAATGCTTCTATCGAGGCAGCAAGAGCAGGA
GAGAGCGGTAAAGGATTCGCAGTCGTTGCTGATGAGATAAGAAAGCTTGCTGAACAGTCACAGCAGTCAACAGATGAGAT
TAAGGAGATTGTTAATGAGATTACTATTAAGTCACAGCAGGTTGAGCAGACAATGGATGAGTCAGTTGGTATTATAGAGG
AACAGAATGTTTCTATTAAGGATGCTAAGGAACTGTTTAATACAATTTCTGATTCAGTTAACGGACTTAAGGAAGGTCTT
GATAACATTACACAGCTCAATGAAGCTATGGATACTAATAGAAGTAATGTTGTAAGCAAGATGGAAGATGTTGCAGCAGT
AGCAACTGAGACCGCAGCAGCTTCTGAAGAGGTTACAGCATCAGCCGTTGATGTTGAGCAGACAATGCACGACCTTAATG
AATTTACAGTTGAACTTGATAATATCGCAGAGGCTCTTAAGGAAGCTATTGATAAGTTCAAGTTGCAATAA

Upstream 100 bases:

>100_bases
TGGCTTCAGGGAAATGTAAGATTTACTGACTGATATTGTTGTTAAATATATGCTTTCATAATAAATTGTATTTAATATAG
AAATTTACATTTTTTTACAA

Downstream 100 bases:

>100_bases
TTAAACTAATCCGATAAATGTGTTTATGGAAGCTGCCACTCGGCGATTGTAATCGCCAGGTGGCAGCTTCTTTTTAATCT
CAGGGTATCATTGACCTTGC

Product: methyl-accepting chemotaxis protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 716; Mature: 716

Protein sequence:

>716_residues
MWYYNTRHVRNRKCQLNIINYKRGGKAMKFFRKLGFQLVLFFVVAITIPIVMLMVSSITTTSSSMENNMKVTSEQTLNEA
QNQFTTYLKTLSQPVDLLTRKNEVKHLEDQGTLDDNVKAVRDSLIASVKVTNGAERAFFATNTNLEITGWGEYNPETGKT
LSKGGLEKGVDRTKEVWYTDCKGLKARNSIYAYFSKPYYSKDFDKTIITVSQEIKHSDGTNYGIVGMHIDFSEITDFVQG
IGLLNTGFVVLADEDGNILVNNDNNKYVTDSVSGLNCWSTVKGLTENDYDKAFSFDENINGEKVHVVTSKDAVTGWTLVG
FISSKETSATTNKMISNTVIFSIIAFVIGIGIALAVTASMTKEIKKVSGHMKDVAGGDLTDRIDVKKKNEFGDLENNFNN
MVENMAVLIKGVEEKSGVIVDASAKIAGVSKSTTETVGQVSEAIQSVAVGASGQADSTQTATQEVENLADRLKETKAYVT
DISDMSVETQKLSNKGLTIVDELITKGQRSIDNSKISKAVVSEMVSSIEKINFISDAITEITEQTNLLSLNASIEAARAG
ESGKGFAVVADEIRKLAEQSQQSTDEIKEIVNEITIKSQQVEQTMDESVGIIEEQNVSIKDAKELFNTISDSVNGLKEGL
DNITQLNEAMDTNRSNVVSKMEDVAAVATETAAASEEVTASAVDVEQTMHDLNEFTVELDNIAEALKEAIDKFKLQ

Sequences:

>Translated_716_residues
MWYYNTRHVRNRKCQLNIINYKRGGKAMKFFRKLGFQLVLFFVVAITIPIVMLMVSSITTTSSSMENNMKVTSEQTLNEA
QNQFTTYLKTLSQPVDLLTRKNEVKHLEDQGTLDDNVKAVRDSLIASVKVTNGAERAFFATNTNLEITGWGEYNPETGKT
LSKGGLEKGVDRTKEVWYTDCKGLKARNSIYAYFSKPYYSKDFDKTIITVSQEIKHSDGTNYGIVGMHIDFSEITDFVQG
IGLLNTGFVVLADEDGNILVNNDNNKYVTDSVSGLNCWSTVKGLTENDYDKAFSFDENINGEKVHVVTSKDAVTGWTLVG
FISSKETSATTNKMISNTVIFSIIAFVIGIGIALAVTASMTKEIKKVSGHMKDVAGGDLTDRIDVKKKNEFGDLENNFNN
MVENMAVLIKGVEEKSGVIVDASAKIAGVSKSTTETVGQVSEAIQSVAVGASGQADSTQTATQEVENLADRLKETKAYVT
DISDMSVETQKLSNKGLTIVDELITKGQRSIDNSKISKAVVSEMVSSIEKINFISDAITEITEQTNLLSLNASIEAARAG
ESGKGFAVVADEIRKLAEQSQQSTDEIKEIVNEITIKSQQVEQTMDESVGIIEEQNVSIKDAKELFNTISDSVNGLKEGL
DNITQLNEAMDTNRSNVVSKMEDVAAVATETAAASEEVTASAVDVEQTMHDLNEFTVELDNIAEALKEAIDKFKLQ
>Mature_716_residues
MWYYNTRHVRNRKCQLNIINYKRGGKAMKFFRKLGFQLVLFFVVAITIPIVMLMVSSITTTSSSMENNMKVTSEQTLNEA
QNQFTTYLKTLSQPVDLLTRKNEVKHLEDQGTLDDNVKAVRDSLIASVKVTNGAERAFFATNTNLEITGWGEYNPETGKT
LSKGGLEKGVDRTKEVWYTDCKGLKARNSIYAYFSKPYYSKDFDKTIITVSQEIKHSDGTNYGIVGMHIDFSEITDFVQG
IGLLNTGFVVLADEDGNILVNNDNNKYVTDSVSGLNCWSTVKGLTENDYDKAFSFDENINGEKVHVVTSKDAVTGWTLVG
FISSKETSATTNKMISNTVIFSIIAFVIGIGIALAVTASMTKEIKKVSGHMKDVAGGDLTDRIDVKKKNEFGDLENNFNN
MVENMAVLIKGVEEKSGVIVDASAKIAGVSKSTTETVGQVSEAIQSVAVGASGQADSTQTATQEVENLADRLKETKAYVT
DISDMSVETQKLSNKGLTIVDELITKGQRSIDNSKISKAVVSEMVSSIEKINFISDAITEITEQTNLLSLNASIEAARAG
ESGKGFAVVADEIRKLAEQSQQSTDEIKEIVNEITIKSQQVEQTMDESVGIIEEQNVSIKDAKELFNTISDSVNGLKEGL
DNITQLNEAMDTNRSNVVSKMEDVAAVATETAAASEEVTASAVDVEQTMHDLNEFTVELDNIAEALKEAIDKFKLQ

Specific function: Chemotactic-signal transducers respond to changes in the concentration of attractants and repellents in the environment, transduce a signal from the outside to the inside of the cell, and facilitate sensory adaptation through the variation of the level of

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cell membrane; Multi-pass membrane protein [H]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Contains 1 methyl-accepting transducer domain [H]

Homologues:

Organism=Escherichia coli, GI2367378, Length=295, Percent_Identity=27.1186440677966, Blast_Score=100, Evalue=6e-22,
Organism=Escherichia coli, GI1788195, Length=271, Percent_Identity=27.6752767527675, Blast_Score=99, Evalue=8e-22,
Organism=Escherichia coli, GI1787690, Length=386, Percent_Identity=26.1658031088083, Blast_Score=95, Evalue=2e-20,
Organism=Escherichia coli, GI1788194, Length=382, Percent_Identity=26.4397905759162, Blast_Score=84, Evalue=3e-17,
Organism=Escherichia coli, GI1789453, Length=213, Percent_Identity=29.5774647887324, Blast_Score=82, Evalue=8e-17,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR004010
- InterPro:   IPR004089
- InterPro:   IPR003660 [H]

Pfam domain/function: PF02743 Cache_1; PF00672 HAMP; PF00015 MCPsignal [H]

EC number: NA

Molecular weight: Translated: 78457; Mature: 78457

Theoretical pI: Translated: 4.59; Mature: 4.59

Prosite motif: PS50885 HAMP ; PS50111 CHEMOTAXIS_TRANSDUC_2

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.4 %Cys     (Translated Protein)
2.5 %Met     (Translated Protein)
2.9 %Cys+Met (Translated Protein)
0.4 %Cys     (Mature Protein)
2.5 %Met     (Mature Protein)
2.9 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MWYYNTRHVRNRKCQLNIINYKRGGKAMKFFRKLGFQLVLFFVVAITIPIVMLMVSSITT
CCCCCCCHHCCCCEEEEEEEECCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHC
TSSSMENNMKVTSEQTLNEAQNQFTTYLKTLSQPVDLLTRKNEVKHLEDQGTLDDNVKAV
CHHHHHCCCEECHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHH
RDSLIASVKVTNGAERAFFATNTNLEITGWGEYNPETGKTLSKGGLEKGVDRTKEVWYTD
HHHHHHEEEECCCCCCEEEEECCCEEEEECCCCCCCCCCHHHHCCHHHHHHHHHHHHHHH
CKGLKARNSIYAYFSKPYYSKDFDKTIITVSQEIKHSDGTNYGIVGMHIDFSEITDFVQG
CCCCCCCCCEEEEECCCCCCCCCCHHHHHHHHHHHCCCCCCEEEEEEECCHHHHHHHHHH
IGLLNTGFVVLADEDGNILVNNDNNKYVTDSVSGLNCWSTVKGLTENDYDKAFSFDENIN
CCHHCCCEEEEECCCCCEEEECCCCEEEECCCCCCCHHHHHCCCCCCCCHHHCCCCCCCC
GEKVHVVTSKDAVTGWTLVGFISSKETSATTNKMISNTVIFSIIAFVIGIGIALAVTASM
CCEEEEEECCCCCCCEEEEEEECCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
TKEIKKVSGHMKDVAGGDLTDRIDVKKKNEFGDLENNFNNMVENMAVLIKGVEEKSGVIV
HHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHCCCCCCCEEE
DASAKIAGVSKSTTETVGQVSEAIQSVAVGASGQADSTQTATQEVENLADRLKETKAYVT
ECCCCEECCCCHHHHHHHHHHHHHHHHHCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHH
DISDMSVETQKLSNKGLTIVDELITKGQRSIDNSKISKAVVSEMVSSIEKINFISDAITE
CHHHCCHHHHHHCCCCCHHHHHHHHCCHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHH
ITEQTNLLSLNASIEAARAGESGKGFAVVADEIRKLAEQSQQSTDEIKEIVNEITIKSQQ
HHHCCCEEEECCCHHHHHCCCCCCCEEHHHHHHHHHHHHHHCCHHHHHHHHHHHHCCHHH
VEQTMDESVGIIEEQNVSIKDAKELFNTISDSVNGLKEGLDNITQLNEAMDTNRSNVVSK
HHHHHHHHCCCEECCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHH
MEDVAAVATETAAASEEVTASAVDVEQTMHDLNEFTVELDNIAEALKEAIDKFKLQ
HHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCC
>Mature Secondary Structure
MWYYNTRHVRNRKCQLNIINYKRGGKAMKFFRKLGFQLVLFFVVAITIPIVMLMVSSITT
CCCCCCCHHCCCCEEEEEEEECCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHC
TSSSMENNMKVTSEQTLNEAQNQFTTYLKTLSQPVDLLTRKNEVKHLEDQGTLDDNVKAV
CHHHHHCCCEECHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHH
RDSLIASVKVTNGAERAFFATNTNLEITGWGEYNPETGKTLSKGGLEKGVDRTKEVWYTD
HHHHHHEEEECCCCCCEEEEECCCEEEEECCCCCCCCCCHHHHCCHHHHHHHHHHHHHHH
CKGLKARNSIYAYFSKPYYSKDFDKTIITVSQEIKHSDGTNYGIVGMHIDFSEITDFVQG
CCCCCCCCCEEEEECCCCCCCCCCHHHHHHHHHHHCCCCCCEEEEEEECCHHHHHHHHHH
IGLLNTGFVVLADEDGNILVNNDNNKYVTDSVSGLNCWSTVKGLTENDYDKAFSFDENIN
CCHHCCCEEEEECCCCCEEEECCCCEEEECCCCCCCHHHHHCCCCCCCCHHHCCCCCCCC
GEKVHVVTSKDAVTGWTLVGFISSKETSATTNKMISNTVIFSIIAFVIGIGIALAVTASM
CCEEEEEECCCCCCCEEEEEEECCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
TKEIKKVSGHMKDVAGGDLTDRIDVKKKNEFGDLENNFNNMVENMAVLIKGVEEKSGVIV
HHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHCCCCCCCEEE
DASAKIAGVSKSTTETVGQVSEAIQSVAVGASGQADSTQTATQEVENLADRLKETKAYVT
ECCCCEECCCCHHHHHHHHHHHHHHHHHCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHH
DISDMSVETQKLSNKGLTIVDELITKGQRSIDNSKISKAVVSEMVSSIEKINFISDAITE
CHHHCCHHHHHHCCCCCHHHHHHHHCCHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHH
ITEQTNLLSLNASIEAARAGESGKGFAVVADEIRKLAEQSQQSTDEIKEIVNEITIKSQQ
HHHCCCEEEECCCHHHHHCCCCCCCEEHHHHHHHHHHHHHHCCHHHHHHHHHHHHCCHHH
VEQTMDESVGIIEEQNVSIKDAKELFNTISDSVNGLKEGLDNITQLNEAMDTNRSNVVSK
HHHHHHHHCCCEECCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHH
MEDVAAVATETAAASEEVTASAVDVEQTMHDLNEFTVELDNIAEALKEAIDKFKLQ
HHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 6.0

TargetDB status: NA

Availability: NA

References: 9353924; 9384377 [H]