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The map label for this gene is rpiB [H]

Identifier: 238917858

GI number: 238917858

Start: 2006713

End: 2007141

Strand: Reverse

Name: rpiB [H]

Synonym: EUBELI_01939

Alternate gene names: 238917858

Gene position: 2007141-2006713 (Counterclockwise)

Preceding gene: 238917859

Following gene: 238917857

Centisome position: 93.61

GC content: 39.63

Gene sequence:

>429_bases
ATGATAGCAATCGGTTGTGATCACGGAGCATTAGAATTAAAGGAACAGCTTATAGAGCATCTTAAGAAGAGAGGCATTGA
GTGCAAGGATTATGGAACATATACTAAGGATTCATGTGATTATCCTGTATATGCAAAGAAAGTGGCTGAGGCTGTTCTTT
CTGGTGAGTGTGAGGAAGGAATTCTTCTTTGTGGAACAGGAATTGGAATGAGCATGGCAGCTAATAAGATTAAGGGAATC
AGAGCGGCATTATGCAGCGACTGCTTCTCAGCACAGGCTACTAAGGAACATAACAATGCCAATGTATTGTGTATGGGTGC
AAGGGTTATCGGACCAGAGCTTGCTTTCAGAATAGCAGATACATTTTTAGATTCCAAGTTTTCTAATGATGAGAGACATA
TAAGAAGAATCAGTATGTTAGAGGATTAA

Upstream 100 bases:

>100_bases
GTGCATGTTTTGAACTGATATACAGGTTAGTCAGCAATGTTGCAGAGTATCTGGATGGGTTATCAGAAGAAAAAGAAGAT
AAGGATAAAGGAGAAGAATA

Downstream 100 bases:

>100_bases
TAAATGGGCGATAAGAGAAAAGATTATATATCATGGGATGAATATTTCATGGGAATTGCAACACTTTCCGGTATGAGGTC
AAAGGATCCTAATACACAGG

Product: galactose-6-phosphate isomerase

Products: NA

Alternate protein names: Phosphoriboisomerase B [H]

Number of amino acids: Translated: 142; Mature: 142

Protein sequence:

>142_residues
MIAIGCDHGALELKEQLIEHLKKRGIECKDYGTYTKDSCDYPVYAKKVAEAVLSGECEEGILLCGTGIGMSMAANKIKGI
RAALCSDCFSAQATKEHNNANVLCMGARVIGPELAFRIADTFLDSKFSNDERHIRRISMLED

Sequences:

>Translated_142_residues
MIAIGCDHGALELKEQLIEHLKKRGIECKDYGTYTKDSCDYPVYAKKVAEAVLSGECEEGILLCGTGIGMSMAANKIKGI
RAALCSDCFSAQATKEHNNANVLCMGARVIGPELAFRIADTFLDSKFSNDERHIRRISMLED
>Mature_142_residues
MIAIGCDHGALELKEQLIEHLKKRGIECKDYGTYTKDSCDYPVYAKKVAEAVLSGECEEGILLCGTGIGMSMAANKIKGI
RAALCSDCFSAQATKEHNNANVLCMGARVIGPELAFRIADTFLDSKFSNDERHIRRISMLED

Specific function: In addition to its activity on D-ribose 5-phosphate it probably also has activity on D-allose 6-phosphate [H]

COG id: COG0698

COG function: function code G; Ribose 5-phosphate isomerase RpiB

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the lacAB/rpiB family [H]

Homologues:

Organism=Escherichia coli, GI1790528, Length=139, Percent_Identity=48.2014388489209, Blast_Score=146, Evalue=6e-37,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR003500
- InterPro:   IPR004785 [H]

Pfam domain/function: PF02502 LacAB_rpiB [H]

EC number: =5.3.1.6 [H]

Molecular weight: Translated: 15563; Mature: 15563

Theoretical pI: Translated: 6.10; Mature: 6.10

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

5.6 %Cys     (Translated Protein)
3.5 %Met     (Translated Protein)
9.2 %Cys+Met (Translated Protein)
5.6 %Cys     (Mature Protein)
3.5 %Met     (Mature Protein)
9.2 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MIAIGCDHGALELKEQLIEHLKKRGIECKDYGTYTKDSCDYPVYAKKVAEAVLSGECEEG
CEEEECCCCHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHCCCCCCC
ILLCGTGIGMSMAANKIKGIRAALCSDCFSAQATKEHNNANVLCMGARVIGPELAFRIAD
EEEEECCCCHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCEEEECCCHHCHHHHHHHHH
TFLDSKFSNDERHIRRISMLED
HHHHCCCCCCHHHHHHHHHCCC
>Mature Secondary Structure
MIAIGCDHGALELKEQLIEHLKKRGIECKDYGTYTKDSCDYPVYAKKVAEAVLSGECEEG
CEEEECCCCHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHCCCCCCC
ILLCGTGIGMSMAANKIKGIRAALCSDCFSAQATKEHNNANVLCMGARVIGPELAFRIAD
EEEEECCCCHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCEEEECCCHHCHHHHHHHHH
TFLDSKFSNDERHIRRISMLED
HHHHCCCCCCHHHHHHHHHCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 8576032; 7610040; 9278503; 1840580; 7984428; 9401019 [H]