Click here to switch to the map view.

The map label for this gene is atpH [H]

Identifier: 238917850

GI number: 238917850

Start: 2002660

End: 2003205

Strand: Reverse

Name: atpH [H]

Synonym: EUBELI_01931

Alternate gene names: 238917850

Gene position: 2003205-2002660 (Counterclockwise)

Preceding gene: 238917851

Following gene: 238917849

Centisome position: 93.42

GC content: 39.56

Gene sequence:

>546_bases
ATGGCTAAGCTAATTGAAGCAACATACGGTGATGCTTTATTTGAGCTTGCCGTAGAAGAGTCCAGGGTGGATTCTCTGTA
TGATGAGGCCGGGGCTGTCATTGAAGCATTTAATGATAATCCGGAGTTTGGCAGACTGCTCAATCATCCAGAAGTTGAAA
AGGGAGAAAAGGAAGGACTTATTAATAACATTTTCTCTCAGTTTGTTTCAGGAGATATGACAGGTTTGTTGATAACCATG
GTCTCAAAGGACAGACAGAAAAAGATTGTTGATACACTTGAGTATTTTCGAAAGAGAGTTCTCGAATACAAGAAAATAGG
AATTGCTTATGTAAGCACAGCAAAGCCACTCACTGATGAACAGAAGAAGGCTGTTGCTGGGAAGCTGTTAGAAACTACAG
GATATGTTGATTTCCAGATGCATTATTCGGTTGATGAAAGTCTTATTGGCGGAATGGTAATAAGAATCGGTGACCGTGTA
GTAGACAGCAGTATTAAGCATAAAATAGACGAACTTTCCAGAAGTCTGATGAAGATTCAGTTATAG

Upstream 100 bases:

>100_bases
TAGCAGCTGTTATGGCATCTAAGTTAGTTGCCAGATCTATTGATGAGAAGGACAGCAATGCTCTTATTGAAGAGACTTTG
AATGAAATGGGTGAGAAAAC

Downstream 100 bases:

>100_bases
GAATATCAGACAGGTTAGTTTAATTAATCAGAAAGCGGGTGCATAGAGCTAATGAATTTAAGACCGGAAGAAATCAGTTC
AGTTATAAAAGAACAGATAA

Product: F-type H+-transporting ATPase delta chain

Products: ADP; phosphate; H+

Alternate protein names: ATP synthase F(1) sector subunit delta; F-type ATPase subunit delta; F-ATPase subunit delta [H]

Number of amino acids: Translated: 181; Mature: 180

Protein sequence:

>181_residues
MAKLIEATYGDALFELAVEESRVDSLYDEAGAVIEAFNDNPEFGRLLNHPEVEKGEKEGLINNIFSQFVSGDMTGLLITM
VSKDRQKKIVDTLEYFRKRVLEYKKIGIAYVSTAKPLTDEQKKAVAGKLLETTGYVDFQMHYSVDESLIGGMVIRIGDRV
VDSSIKHKIDELSRSLMKIQL

Sequences:

>Translated_181_residues
MAKLIEATYGDALFELAVEESRVDSLYDEAGAVIEAFNDNPEFGRLLNHPEVEKGEKEGLINNIFSQFVSGDMTGLLITM
VSKDRQKKIVDTLEYFRKRVLEYKKIGIAYVSTAKPLTDEQKKAVAGKLLETTGYVDFQMHYSVDESLIGGMVIRIGDRV
VDSSIKHKIDELSRSLMKIQL
>Mature_180_residues
AKLIEATYGDALFELAVEESRVDSLYDEAGAVIEAFNDNPEFGRLLNHPEVEKGEKEGLINNIFSQFVSGDMTGLLITMV
SKDRQKKIVDTLEYFRKRVLEYKKIGIAYVSTAKPLTDEQKKAVAGKLLETTGYVDFQMHYSVDESLIGGMVIRIGDRVV
DSSIKHKIDELSRSLMKIQL

Specific function: This protein is part of the stalk that links CF(0) to CF(1). It either transmits conformational changes from CF(0) to CF(1) or is implicated in proton conduction [H]

COG id: COG0712

COG function: function code C; F0F1-type ATP synthase, delta subunit (mitochondrial oligomycin sensitivity protein)

Gene ontology:

Cell location: Cell membrane; Peripheral membrane protein [H]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the ATPase delta chain family [H]

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR000711 [H]

Pfam domain/function: PF00213 OSCP [H]

EC number: 3.6.3.14

Molecular weight: Translated: 20369; Mature: 20237

Theoretical pI: Translated: 4.97; Mature: 4.97

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
3.3 %Met     (Translated Protein)
3.3 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
2.8 %Met     (Mature Protein)
2.8 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MAKLIEATYGDALFELAVEESRVDSLYDEAGAVIEAFNDNPEFGRLLNHPEVEKGEKEGL
CCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHEEHHCCCCCHHHHHCCCCCCCCCCHHHH
INNIFSQFVSGDMTGLLITMVSKDRQKKIVDTLEYFRKRVLEYKKIGIAYVSTAKPLTDE
HHHHHHHHHCCCHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHCCCEECCCCCCCHH
QKKAVAGKLLETTGYVDFQMHYSVDESLIGGMVIRIGDRVVDSSIKHKIDELSRSLMKIQ
HHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHC
L
C
>Mature Secondary Structure 
AKLIEATYGDALFELAVEESRVDSLYDEAGAVIEAFNDNPEFGRLLNHPEVEKGEKEGL
CCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHEEHHCCCCCHHHHHCCCCCCCCCCHHHH
INNIFSQFVSGDMTGLLITMVSKDRQKKIVDTLEYFRKRVLEYKKIGIAYVSTAKPLTDE
HHHHHHHHHCCCHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHCCCEECCCCCCCHH
QKKAVAGKLLETTGYVDFQMHYSVDESLIGGMVIRIGDRVVDSSIKHKIDELSRSLMKIQ
HHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHC
L
C

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: Borate; diphosphate; HCO3- [C]

Metal ions: Co2+; Fe2+; Mn2+; Zn2+ [C]

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: ATP; H2O; H+

Specific reaction: ATP + H2O + H+(in) = ADP + phosphate + H+(out)

General reaction: Phosphorous acid anhydride hydrolysis [C]

Inhibitor: Ca2+; CN-; Efrapeptin; Ethidiumbromide; Guanidines analogs; Oligomycin; Quercetin; Trialkyl tin derivatives; Venturicidin [C]

Structure determination priority: 7.0

TargetDB status: NA

Availability: NA

References: NA