| Definition | Eubacterium eligens ATCC 27750 chromosome, complete genome. |
|---|---|
| Accession | NC_012778 |
| Length | 2,144,190 |
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The map label for this gene is ydjG [H]
Identifier: 238917750
GI number: 238917750
Start: 1889985
End: 1891010
Strand: Reverse
Name: ydjG [H]
Synonym: EUBELI_01831
Alternate gene names: 238917750
Gene position: 1891010-1889985 (Counterclockwise)
Preceding gene: 238917751
Following gene: 238917749
Centisome position: 88.19
GC content: 38.79
Gene sequence:
>1026_bases ATGCCAACAATTTACAAATGTCCTGGGTGCGGTGCTGCTATGGAGTTTGACAGTACAACACAGAAATTAGGCTGTCCGTC ATGTGGAATGCAGATTGATGTGCGGGAATATGAACAGAAATATTCACAGAACAGCACACAGGGGGAATATGACAAAGAGA TGAAGATGTACCATTGTAATACATGTGGTGCAGAGCTTGTAGCAGATGAGTATACATCGGCAACATTTTGTTCATTCTGT GGTAATCCGACACTTGTGGAGGACAGACTTAAAGGTGAATTCAAGCCATCAACAATTATACCATTTAAGATTAACAAGGA TAAAGCAGTAGAGATTTACAAAAACTGGTGTAAGAAAGGACCGCTCACACCATCTGCTTTATCAAGAAATTCAACAATTG AGAAAATAAGCGGACTGTATGTACCTTACTGGCTGTATGATTATTCGGCACAGACTGATATGCATGCTAATGCAGAAAGG GTAAGGACAACAAGAAAAGGTGATACAGAGTATATATACACAGATCATTTTCAGGTGTTCAGAAATATATCTGCAAAGTT TGAGAAGATTCCGGCTGATGCATCTGAGAAAATGCCTGATGATGCGATGGATAAGCTGGAACCATTTAACTATAACGAAT TAACTGCATTTTCAATGCCATATCTGTCAGGATATCTTTCAGAAAGATATAATTATACGGCAGACCAGATACAGGAGAGA GCTACAAGAAGAGCTGACAAATATATAACAGATATTGCAATGTCAACAATTACCGGTTATTCATCTGTCAATATAATCCA CAATGACATAACAATGCGTCCAACAGGAAGCCAGTATGCATTATTTCCGGTATGGGTACTTAATTACAGGTTTAACAAGA AGAATTTCCAGTTCATGCTTAACGGACAGACAGGAAAGATAGTTGCTGACAGACCGATAAGCGGAAAGAAAGCATTTGGC TATGGAGCGGGAATATTCCTTGTTACACTTATTATTACGATGTTTGGAGGGCTGTTGTTCATATGA
Upstream 100 bases:
>100_bases ATTATATTGAACAAAAGTGAAGAAACAATGTGCATAGTGTTAAATCTTATTGAATTAGATATGAACAATTTATGAACATG CGTGGATTAAGGAGGGGAAT
Downstream 100 bases:
>100_bases TGAAGATTAGTAGAAAAATGAAAGCTCTCATGAGCGTAATTATGGCGTGCATTATGTGCGTTGGTGTGTTATTCAGCATG AAAAGTGATGTCTATGCGGA
Product: hypothetical protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 341; Mature: 340
Protein sequence:
>341_residues MPTIYKCPGCGAAMEFDSTTQKLGCPSCGMQIDVREYEQKYSQNSTQGEYDKEMKMYHCNTCGAELVADEYTSATFCSFC GNPTLVEDRLKGEFKPSTIIPFKINKDKAVEIYKNWCKKGPLTPSALSRNSTIEKISGLYVPYWLYDYSAQTDMHANAER VRTTRKGDTEYIYTDHFQVFRNISAKFEKIPADASEKMPDDAMDKLEPFNYNELTAFSMPYLSGYLSERYNYTADQIQER ATRRADKYITDIAMSTITGYSSVNIIHNDITMRPTGSQYALFPVWVLNYRFNKKNFQFMLNGQTGKIVADRPISGKKAFG YGAGIFLVTLIITMFGGLLFI
Sequences:
>Translated_341_residues MPTIYKCPGCGAAMEFDSTTQKLGCPSCGMQIDVREYEQKYSQNSTQGEYDKEMKMYHCNTCGAELVADEYTSATFCSFC GNPTLVEDRLKGEFKPSTIIPFKINKDKAVEIYKNWCKKGPLTPSALSRNSTIEKISGLYVPYWLYDYSAQTDMHANAER VRTTRKGDTEYIYTDHFQVFRNISAKFEKIPADASEKMPDDAMDKLEPFNYNELTAFSMPYLSGYLSERYNYTADQIQER ATRRADKYITDIAMSTITGYSSVNIIHNDITMRPTGSQYALFPVWVLNYRFNKKNFQFMLNGQTGKIVADRPISGKKAFG YGAGIFLVTLIITMFGGLLFI >Mature_340_residues PTIYKCPGCGAAMEFDSTTQKLGCPSCGMQIDVREYEQKYSQNSTQGEYDKEMKMYHCNTCGAELVADEYTSATFCSFCG NPTLVEDRLKGEFKPSTIIPFKINKDKAVEIYKNWCKKGPLTPSALSRNSTIEKISGLYVPYWLYDYSAQTDMHANAERV RTTRKGDTEYIYTDHFQVFRNISAKFEKIPADASEKMPDDAMDKLEPFNYNELTAFSMPYLSGYLSERYNYTADQIQERA TRRADKYITDIAMSTITGYSSVNIIHNDITMRPTGSQYALFPVWVLNYRFNKKNFQFMLNGQTGKIVADRPISGKKAFGY GAGIFLVTLIITMFGGLLFI
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cell membrane; Single-pass membrane protein (Potential) [H]
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR004039 - InterPro: IPR013137 [H]
Pfam domain/function: PF08271 TFIIB_Zn_Ribbon [H]
EC number: NA
Molecular weight: Translated: 38815; Mature: 38683
Theoretical pI: Translated: 7.64; Mature: 7.64
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
2.6 %Cys (Translated Protein) 3.8 %Met (Translated Protein) 6.5 %Cys+Met (Translated Protein) 2.6 %Cys (Mature Protein) 3.5 %Met (Mature Protein) 6.2 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MPTIYKCPGCGAAMEFDSTTQKLGCPSCGMQIDVREYEQKYSQNSTQGEYDKEMKMYHCN CCCCEECCCCCCEEECCCCHHHCCCCCCCCEEEHHHHHHHHCCCCCCCCCHHHHEEEECC TCGAELVADEYTSATFCSFCGNPTLVEDRLKGEFKPSTIIPFKINKDKAVEIYKNWCKKG CCCHHHHHHHCCCHHHHHHCCCCCEEHHHHCCCCCCCEEEEEEECCCHHHHHHHHHHHCC PLTPSALSRNSTIEKISGLYVPYWLYDYSAQTDMHANAERVRTTRKGDTEYIYTDHFQVF CCCHHHHCCCCHHHHHCCCEEEEEEEECCCCCCCCCCHHHHHHCCCCCCCEEECHHHHHH RNISAKFEKIPADASEKMPDDAMDKLEPFNYNELTAFSMPYLSGYLSERYNYTADQIQER HHHHHHHHHCCCCCHHCCCCHHHHHCCCCCCCCEEEEHHHHHHHHHHHHCCCCHHHHHHH ATRRADKYITDIAMSTITGYSSVNIIHNDITMRPTGSQYALFPVWVLNYRFNKKNFQFML HHHHHHHHHHHHHHHHHCCCCEEEEEECCEEECCCCCCEEEEEEEEEEEEECCCCEEEEE NGQTGKIVADRPISGKKAFGYGAGIFLVTLIITMFGGLLFI ECCCCCEEECCCCCCCCCCCCCHHHHHHHHHHHHHHHHHCC >Mature Secondary Structure PTIYKCPGCGAAMEFDSTTQKLGCPSCGMQIDVREYEQKYSQNSTQGEYDKEMKMYHCN CCCEECCCCCCEEECCCCHHHCCCCCCCCEEEHHHHHHHHCCCCCCCCCHHHHEEEECC TCGAELVADEYTSATFCSFCGNPTLVEDRLKGEFKPSTIIPFKINKDKAVEIYKNWCKKG CCCHHHHHHHCCCHHHHHHCCCCCEEHHHHCCCCCCCEEEEEEECCCHHHHHHHHHHHCC PLTPSALSRNSTIEKISGLYVPYWLYDYSAQTDMHANAERVRTTRKGDTEYIYTDHFQVF CCCHHHHCCCCHHHHHCCCEEEEEEEECCCCCCCCCCHHHHHHCCCCCCCEEECHHHHHH RNISAKFEKIPADASEKMPDDAMDKLEPFNYNELTAFSMPYLSGYLSERYNYTADQIQER HHHHHHHHHCCCCCHHCCCCHHHHHCCCCCCCCEEEEHHHHHHHHHHHHCCCCHHHHHHH ATRRADKYITDIAMSTITGYSSVNIIHNDITMRPTGSQYALFPVWVLNYRFNKKNFQFML HHHHHHHHHHHHHHHHHCCCCEEEEEECCEEECCCCCCEEEEEEEEEEEEECCCCEEEEE NGQTGKIVADRPISGKKAFGYGAGIFLVTLIITMFGGLLFI ECCCCCEEECCCCCCCCCCCCCHHHHHHHHHHHHHHHHHCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 7.0
TargetDB status: NA
Availability: NA
References: 9455482; 9384377 [H]