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The map label for this gene is ltrBE1 [H]

Identifier: 238917717

GI number: 238917717

Start: 1857516

End: 1859342

Strand: Reverse

Name: ltrBE1 [H]

Synonym: EUBELI_01797

Alternate gene names: 238917717

Gene position: 1859342-1857516 (Counterclockwise)

Preceding gene: 238917718

Following gene: 238917715

Centisome position: 86.72

GC content: 41.11

Gene sequence:

>1827_bases
ATGGCGATTACAAAGATCTTAAATATACAGGAGTCAGATGGCAGAAATCCGGCATCACACCTGAAGAATGCTTTGGAATA
TATACAGAATCCGGATAAGACAGAAGAATGTGTACTGGTGGGCAGTATTAACTGCCTGCCGGATACGGCATTTGAGCAGA
TGGAGGAGACGAAGAATATATTTCATAAGACAGGTAAAAGGCAGGGCTATCATGTGATCATATCATTTTCACCGGAAGAA
AAAGTGACGGCAGAGCATGCAATGTATGTGCTGGAGCACTTTGCAAAGGATGTGCTTGGTAATGATTATGAGGCGGTGTA
TGCAGTTCATACTGACAGGGAACATATGCATGGGCATCTGATCTGGAATAGTGTGAGTATGACAACCGGCAAGAAATATA
ATTCACCTAAAGGCAATTGGAAGAATCATCTGCAGCCGATTACAAATAAATATTGTGATGAACTTGGACTTTCCATAATG
CCGGCAGAGTACAGCAAGAATCCAAAGAATATCAGCAGGGACAAGTGGGAAAAGGAAATGTCCATGAAAGAGATAATTCT
CAGGGATGCCAAGATGTGTGCATATGCAGCCGGGAATGTGGAGCATTTTAAATATCTGATGAAAAGACTTGGATATGTAT
TTAAGAAAGACGCATGGATGGAGGTGCAGGCACCGGGATTTCGGTATTATCATAAACTGGCAAAGCTGGACGAGATGTTT
TCAGAAGATATGTTACGGCATTATGTGGATATGCCCTGGATGTCAAAGCCTTACTTTTATTCGTCGGATATCAGGGGGTT
ACACAGGGCGAAGCTGTCACCATTCCAGAAGAAGTTTTATGCAAAGCTATACAGATTAAGGATTGTAGAGCAAAAGCGTT
TTGTGGTTGGTGGAGCAAAGTATACAGAGGATTTGAAGCGGTTTCATCAGTTACAGGACGAATATCTGCTGATTGTAAAT
AATGACATCAAAAGTGTTGTGGATCTTGTGGATTTCATAGGTGAGCAGGAAGAAAAGATCCAGCAGATTGAGGACAGGCA
GAAGGAGATATACAGAGAAAGCTCTAGCCGGAAACGCAGTATAAAGAATGAAGAGCAGTACCGGGAATATCAGATATGGC
ATATGGAAGTGCAGGAAGAACTGGATGAGCTTAAGCAGGAGAAAAAGGGAATTAAGAGACAGATACAGCTTGCTGATGAC
ATTATAAAAGAAGATTTGTATACGGCTTATTATGCGGTGTCGGGAAATGAGGAGATTGTTGCTGACAGGGATGTTGAGAT
ACCGAGGATGGAAGAGAATACTGAGGTTGAGAAAGTGGCGGCAGCAGTTGTTAAGCCTGATGCAAATGTTGAGGTAATGA
ATCCTAATAATAATCAGAATGAAATAGGCAGACAGAAAGAGCAAACAGATAGTGCGAGAAAACAACAGACTGGTTTAGAG
GGTATAGGAATACCAGAGGTTCATAATTCGTCTGATGTGAATGTGGCAAGAATGGACGAAAGTACAACTGATGTAACAGG
TAAAAGTGAATTTGTGGAAACTAAAGAAACTGAGCCTGTGGACAAAGTTGGTTGGATTGTCAGGAGAATATCAGAGCTTG
GCGGTTATGAAAATATCAGTGATTCAGTTAAGGCAGATGTATTCGGATTCGATATAGCTGATGTGAGTGGAAGTATAAGG
TTGTTCTCGGATGTAATGAAAAGGCTGGGGATAAAAAAGGATGGAGATGAGCTTTATGAGGAGTTTCAGAGGATTTATGA
TGAGAGAGTTAGTAGAGATACTAATACAGAAAAAGCAAAAGACAAGATATGGGATATGCGGAGATAA

Upstream 100 bases:

>100_bases
AGCTTGGCAATTCACAGGGAAAGTTATATTACAGCGATATTGATAAACTGCAGAGCAGTCTGGATGATGTAAAGAAAACG
TTTGGGGAGGTGCTGGAAGT

Downstream 100 bases:

>100_bases
AACATTGCGAGATGTATGTAGGTACATCTCGCAATTGGAAAATTACTGATTTTCTTTTTCAATAAATTTTTTGTAGTGTA
TCTGCATGTATGCCTTCATT

Product: hypothetical protein

Products: NA

Alternate protein names: Conjugative nickase [H]

Number of amino acids: Translated: 608; Mature: 607

Protein sequence:

>608_residues
MAITKILNIQESDGRNPASHLKNALEYIQNPDKTEECVLVGSINCLPDTAFEQMEETKNIFHKTGKRQGYHVIISFSPEE
KVTAEHAMYVLEHFAKDVLGNDYEAVYAVHTDREHMHGHLIWNSVSMTTGKKYNSPKGNWKNHLQPITNKYCDELGLSIM
PAEYSKNPKNISRDKWEKEMSMKEIILRDAKMCAYAAGNVEHFKYLMKRLGYVFKKDAWMEVQAPGFRYYHKLAKLDEMF
SEDMLRHYVDMPWMSKPYFYSSDIRGLHRAKLSPFQKKFYAKLYRLRIVEQKRFVVGGAKYTEDLKRFHQLQDEYLLIVN
NDIKSVVDLVDFIGEQEEKIQQIEDRQKEIYRESSSRKRSIKNEEQYREYQIWHMEVQEELDELKQEKKGIKRQIQLADD
IIKEDLYTAYYAVSGNEEIVADRDVEIPRMEENTEVEKVAAAVVKPDANVEVMNPNNNQNEIGRQKEQTDSARKQQTGLE
GIGIPEVHNSSDVNVARMDESTTDVTGKSEFVETKETEPVDKVGWIVRRISELGGYENISDSVKADVFGFDIADVSGSIR
LFSDVMKRLGIKKDGDELYEEFQRIYDERVSRDTNTEKAKDKIWDMRR

Sequences:

>Translated_608_residues
MAITKILNIQESDGRNPASHLKNALEYIQNPDKTEECVLVGSINCLPDTAFEQMEETKNIFHKTGKRQGYHVIISFSPEE
KVTAEHAMYVLEHFAKDVLGNDYEAVYAVHTDREHMHGHLIWNSVSMTTGKKYNSPKGNWKNHLQPITNKYCDELGLSIM
PAEYSKNPKNISRDKWEKEMSMKEIILRDAKMCAYAAGNVEHFKYLMKRLGYVFKKDAWMEVQAPGFRYYHKLAKLDEMF
SEDMLRHYVDMPWMSKPYFYSSDIRGLHRAKLSPFQKKFYAKLYRLRIVEQKRFVVGGAKYTEDLKRFHQLQDEYLLIVN
NDIKSVVDLVDFIGEQEEKIQQIEDRQKEIYRESSSRKRSIKNEEQYREYQIWHMEVQEELDELKQEKKGIKRQIQLADD
IIKEDLYTAYYAVSGNEEIVADRDVEIPRMEENTEVEKVAAAVVKPDANVEVMNPNNNQNEIGRQKEQTDSARKQQTGLE
GIGIPEVHNSSDVNVARMDESTTDVTGKSEFVETKETEPVDKVGWIVRRISELGGYENISDSVKADVFGFDIADVSGSIR
LFSDVMKRLGIKKDGDELYEEFQRIYDERVSRDTNTEKAKDKIWDMRR
>Mature_607_residues
AITKILNIQESDGRNPASHLKNALEYIQNPDKTEECVLVGSINCLPDTAFEQMEETKNIFHKTGKRQGYHVIISFSPEEK
VTAEHAMYVLEHFAKDVLGNDYEAVYAVHTDREHMHGHLIWNSVSMTTGKKYNSPKGNWKNHLQPITNKYCDELGLSIMP
AEYSKNPKNISRDKWEKEMSMKEIILRDAKMCAYAAGNVEHFKYLMKRLGYVFKKDAWMEVQAPGFRYYHKLAKLDEMFS
EDMLRHYVDMPWMSKPYFYSSDIRGLHRAKLSPFQKKFYAKLYRLRIVEQKRFVVGGAKYTEDLKRFHQLQDEYLLIVNN
DIKSVVDLVDFIGEQEEKIQQIEDRQKEIYRESSSRKRSIKNEEQYREYQIWHMEVQEELDELKQEKKGIKRQIQLADDI
IKEDLYTAYYAVSGNEEIVADRDVEIPRMEENTEVEKVAAAVVKPDANVEVMNPNNNQNEIGRQKEQTDSARKQQTGLEG
IGIPEVHNSSDVNVARMDESTTDVTGKSEFVETKETEPVDKVGWIVRRISELGGYENISDSVKADVFGFDIADVSGSIRL
FSDVMKRLGIKKDGDELYEEFQRIYDERVSRDTNTEKAKDKIWDMRR

Specific function: Mediates initition of conjugal transfer of plasmid pRS01 possibly by introducing a single-stranded nick at the potential origin of transfer, to initiate single strand transfer from donor to recipient [H]

COG id: COG3843

COG function: function code U; Type IV secretory pathway, VirD2 components (relaxase)

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: Belongs to the mobilization (MOB) protein type 1 family [H]

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR005094 [H]

Pfam domain/function: PF03432 Relaxase [H]

EC number: NA

Molecular weight: Translated: 70962; Mature: 70831

Theoretical pI: Translated: 5.79; Mature: 5.79

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.7 %Cys     (Translated Protein)
3.5 %Met     (Translated Protein)
4.1 %Cys+Met (Translated Protein)
0.7 %Cys     (Mature Protein)
3.3 %Met     (Mature Protein)
4.0 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MAITKILNIQESDGRNPASHLKNALEYIQNPDKTEECVLVGSINCLPDTAFEQMEETKNI
CCCHHEECCCCCCCCCHHHHHHHHHHHHCCCCCCCCEEEEECCCCCCCHHHHHHHHHHHH
FHKTGKRQGYHVIISFSPEEKVTAEHAMYVLEHFAKDVLGNDYEAVYAVHTDREHMHGHL
HHHCCCCCCCEEEEEECCCHHHHHHHHHHHHHHHHHHHHCCCCEEEEEEECCHHHHCCEE
IWNSVSMTTGKKYNSPKGNWKNHLQPITNKYCDELGLSIMPAEYSKNPKNISRDKWEKEM
EEECEEECCCCCCCCCCCCHHHHHHHHHHHHHHHHCCEEECHHHCCCCCCCCHHHHHHHH
SMKEIILRDAKMCAYAAGNVEHFKYLMKRLGYVFKKDAWMEVQAPGFRYYHKLAKLDEMF
HHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHCCCCCEEECCCCHHHHHHHHHHHHHH
SEDMLRHYVDMPWMSKPYFYSSDIRGLHRAKLSPFQKKFYAKLYRLRIVEQKRFVVGGAK
HHHHHHHHHCCCCCCCCCEECHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHEECCHH
YTEDLKRFHQLQDEYLLIVNNDIKSVVDLVDFIGEQEEKIQQIEDRQKEIYRESSSRKRS
HHHHHHHHHHCCCCEEEEECCCHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHH
IKNEEQYREYQIWHMEVQEELDELKQEKKGIKRQIQLADDIIKEDLYTAYYAVSGNEEIV
CCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHEEEEECCCCCEE
ADRDVEIPRMEENTEVEKVAAAVVKPDANVEVMNPNNNQNEIGRQKEQTDSARKQQTGLE
ECCCCCCCCCCCCCHHHHHHHHHCCCCCCEEEECCCCCHHHHCCHHHHHHHHHHHHCCCC
GIGIPEVHNSSDVNVARMDESTTDVTGKSEFVETKETEPVDKVGWIVRRISELGGYENIS
CCCCCCCCCCCCCEEEECCCCCCCCCCCHHHHCCCCCCCHHHHHHHHHHHHHHCCCCCCC
DSVKADVFGFDIADVSGSIRLFSDVMKRLGIKKDGDELYEEFQRIYDERVSRDTNTEKAK
HHHHHHHCCCCHHCCCCHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHCCCCCHHHHH
DKIWDMRR
HHHHCCCC
>Mature Secondary Structure 
AITKILNIQESDGRNPASHLKNALEYIQNPDKTEECVLVGSINCLPDTAFEQMEETKNI
CCHHEECCCCCCCCCHHHHHHHHHHHHCCCCCCCCEEEEECCCCCCCHHHHHHHHHHHH
FHKTGKRQGYHVIISFSPEEKVTAEHAMYVLEHFAKDVLGNDYEAVYAVHTDREHMHGHL
HHHCCCCCCCEEEEEECCCHHHHHHHHHHHHHHHHHHHHCCCCEEEEEEECCHHHHCCEE
IWNSVSMTTGKKYNSPKGNWKNHLQPITNKYCDELGLSIMPAEYSKNPKNISRDKWEKEM
EEECEEECCCCCCCCCCCCHHHHHHHHHHHHHHHHCCEEECHHHCCCCCCCCHHHHHHHH
SMKEIILRDAKMCAYAAGNVEHFKYLMKRLGYVFKKDAWMEVQAPGFRYYHKLAKLDEMF
HHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHCCCCCEEECCCCHHHHHHHHHHHHHH
SEDMLRHYVDMPWMSKPYFYSSDIRGLHRAKLSPFQKKFYAKLYRLRIVEQKRFVVGGAK
HHHHHHHHHCCCCCCCCCEECHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHEECCHH
YTEDLKRFHQLQDEYLLIVNNDIKSVVDLVDFIGEQEEKIQQIEDRQKEIYRESSSRKRS
HHHHHHHHHHCCCCEEEEECCCHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHH
IKNEEQYREYQIWHMEVQEELDELKQEKKGIKRQIQLADDIIKEDLYTAYYAVSGNEEIV
CCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHEEEEECCCCCEE
ADRDVEIPRMEENTEVEKVAAAVVKPDANVEVMNPNNNQNEIGRQKEQTDSARKQQTGLE
ECCCCCCCCCCCCCHHHHHHHHHCCCCCCEEEECCCCCHHHHCCHHHHHHHHHHHHCCCC
GIGIPEVHNSSDVNVARMDESTTDVTGKSEFVETKETEPVDKVGWIVRRISELGGYENIS
CCCCCCCCCCCCCEEEECCCCCCCCCCCHHHHCCCCCCCHHHHHHHHHHHHHHCCCCCCC
DSVKADVFGFDIADVSGSIRLFSDVMKRLGIKKDGDELYEEFQRIYDERVSRDTNTEKAK
HHHHHHHCCCCHHCCCCHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHCCCCCHHHHH
DKIWDMRR
HHHHCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: 8655550; 10532373 [H]