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The map label for this gene is int [H]

Identifier: 238917697

GI number: 238917697

Start: 1839064

End: 1840158

Strand: Reverse

Name: int [H]

Synonym: EUBELI_01777

Alternate gene names: 238917697

Gene position: 1840158-1839064 (Counterclockwise)

Preceding gene: 238917698

Following gene: 238917696

Centisome position: 85.82

GC content: 39.45

Gene sequence:

>1095_bases
ATGGCGGTTATCAAGAATTATAAGACTGGAATGTGTGAGGTGAGAACCTATTATAAGGATTTGACCGGAGCAAGGAAACA
GAAAACCAAGAGGGGCTTTGCAAAGAAGAGCGAAGCCCTTGAATGGGAGCGTAATTTCAAGCTGAAAGAGGATCAGAGTA
TCAGTATGAGCTTCAAAAGTTTTGTGGATATTTATCTGACGGATTTAGAGCCAAAAATAAAACGCAATACTTTCCTGACA
AAGAAGCACATTATTGAGACAAAGATTCTGCCTTATTTCGGGAAACGAAAACTGGATGATATTCGAACCTCGAATGTCAT
CCAGTGGCAGAATGAGATTATGAAGCTGAAAAAAGATAACGGGGAGTTATTCTCCCCTACCTATCTGAAAACCATTCATA
ATCAGCTTAGTGCCATATTAAATCATGCGGTAAATATGTATGGCCTGAAAGATAATGTGGCACGAAAAGCCGGAACTATG
GGTAAGGAAGAAAATAAGGAAATGGAGTTCTGGACACAGGAGGAATTTCAGGCATTTTTGGAGTGTGTGGTAGATAAGCC
TATTTCGTATTATGCATTTGAAATACTTTATTGGACTGGTATTCGTGAAGGTGAGCTGCTTGCCTTGACACTGGGTGATT
TCAATTTTGAAAAGAAAACGCTTCGGATAAACAAGTCATATCAGAGGTTGGAAGGTAAAGATGTAATTACAGACCAGAAA
ACACCAAAGAGTAACAGAACCATTGCCATGCCGGATTTCCTTACTATAGAGATGGAGGATTTTATAAAAAACATATATGG
AATCAAGATGGATGACAGAATTTTTACCATTTCAAAAAGCTATCTGCATCACGAAATGGATAGGGGAGCGAAGCTTGCAG
GAGTGAAAAGAATCCGAATCCATGGATTACGACATTCGCATATTTCCCTGTTAATCAATTTAGGATTTTCAGCATTGACA
ATAGGGGAAAGAGTCGGACATGAGTCGGTAGATATCACTTATCATTATGCACATTTATTTCCAACGGTGCAGACGGATAT
GGCAGCACAACTGGAAACAGAAAGGGAGGCGTTGGTCGATGTCAGAAAAGAATAG

Upstream 100 bases:

>100_bases
ACTTGAGGCGGATGGATTCGTGACAATAAAAGGGCGTGTCAGTACACAGTATTTTATGAAACGAATCTACGGGCTGTCTA
CGGATAAGGAGGTGGGATAG

Downstream 100 bases:

>100_bases
AGATGATAAAAACAGATGGCGTAATGTGACAATCGCATTTCGCATGTCACCGGAGGAGAATGAAGAACTAAATAACCGGG
TGAAACTCAGCGGATTTCGC

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 364; Mature: 363

Protein sequence:

>364_residues
MAVIKNYKTGMCEVRTYYKDLTGARKQKTKRGFAKKSEALEWERNFKLKEDQSISMSFKSFVDIYLTDLEPKIKRNTFLT
KKHIIETKILPYFGKRKLDDIRTSNVIQWQNEIMKLKKDNGELFSPTYLKTIHNQLSAILNHAVNMYGLKDNVARKAGTM
GKEENKEMEFWTQEEFQAFLECVVDKPISYYAFEILYWTGIREGELLALTLGDFNFEKKTLRINKSYQRLEGKDVITDQK
TPKSNRTIAMPDFLTIEMEDFIKNIYGIKMDDRIFTISKSYLHHEMDRGAKLAGVKRIRIHGLRHSHISLLINLGFSALT
IGERVGHESVDITYHYAHLFPTVQTDMAAQLETEREALVDVRKE

Sequences:

>Translated_364_residues
MAVIKNYKTGMCEVRTYYKDLTGARKQKTKRGFAKKSEALEWERNFKLKEDQSISMSFKSFVDIYLTDLEPKIKRNTFLT
KKHIIETKILPYFGKRKLDDIRTSNVIQWQNEIMKLKKDNGELFSPTYLKTIHNQLSAILNHAVNMYGLKDNVARKAGTM
GKEENKEMEFWTQEEFQAFLECVVDKPISYYAFEILYWTGIREGELLALTLGDFNFEKKTLRINKSYQRLEGKDVITDQK
TPKSNRTIAMPDFLTIEMEDFIKNIYGIKMDDRIFTISKSYLHHEMDRGAKLAGVKRIRIHGLRHSHISLLINLGFSALT
IGERVGHESVDITYHYAHLFPTVQTDMAAQLETEREALVDVRKE
>Mature_363_residues
AVIKNYKTGMCEVRTYYKDLTGARKQKTKRGFAKKSEALEWERNFKLKEDQSISMSFKSFVDIYLTDLEPKIKRNTFLTK
KHIIETKILPYFGKRKLDDIRTSNVIQWQNEIMKLKKDNGELFSPTYLKTIHNQLSAILNHAVNMYGLKDNVARKAGTMG
KEENKEMEFWTQEEFQAFLECVVDKPISYYAFEILYWTGIREGELLALTLGDFNFEKKTLRINKSYQRLEGKDVITDQKT
PKSNRTIAMPDFLTIEMEDFIKNIYGIKMDDRIFTISKSYLHHEMDRGAKLAGVKRIRIHGLRHSHISLLINLGFSALTI
GERVGHESVDITYHYAHLFPTVQTDMAAQLETEREALVDVRKE

Specific function: Putative integrase that is involved in the insertion of the integrative and conjugative element ICEBs1. Required for the excision of ICEBs1 from the donor cell genome and subsequent integration in the recipient cell genome. Appears not to be transferred t

COG id: COG0582

COG function: function code L; Integrase

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: Belongs to the 'phage' integrase family [H]

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR011010
- InterPro:   IPR013762
- InterPro:   IPR002104
- InterPro:   IPR023109 [H]

Pfam domain/function: PF00589 Phage_integrase [H]

EC number: NA

Molecular weight: Translated: 42522; Mature: 42390

Theoretical pI: Translated: 9.63; Mature: 9.63

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.5 %Cys     (Translated Protein)
3.3 %Met     (Translated Protein)
3.8 %Cys+Met (Translated Protein)
0.6 %Cys     (Mature Protein)
3.0 %Met     (Mature Protein)
3.6 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MAVIKNYKTGMCEVRTYYKDLTGARKQKTKRGFAKKSEALEWERNFKLKEDQSISMSFKS
CCEECCCCCCHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCHHHHHHH
FVDIYLTDLEPKIKRNTFLTKKHIIETKILPYFGKRKLDDIRTSNVIQWQNEIMKLKKDN
HHHEEEECCCCCHHHCHHHHHHHHHHHHHCCCCCCCHHHHHHCCCHHHHHHHHHHHHCCC
GELFSPTYLKTIHNQLSAILNHAVNMYGLKDNVARKAGTMGKEENKEMEFWTQEEFQAFL
CCEECHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHCCCCCCCCCCCHHCCHHHHHHHH
ECVVDKPISYYAFEILYWTGIREGELLALTLGDFNFEKKTLRINKSYQRLEGKDVITDQK
HHHHCCCHHHHEEEEEEEECCCCCCEEEEEECCCCCCCCEEEECCHHHHCCCCCCCCCCC
TPKSNRTIAMPDFLTIEMEDFIKNIYGIKMDDRIFTISKSYLHHEMDRGAKLAGVKRIRI
CCCCCCEEECCCEEEEEHHHHHHHHHCCCCCCEEEEEEHHHHHHHHHCCCHHHCEEEEEE
HGLRHSHISLLINLGFSALTIGERVGHESVDITYHYAHLFPTVQTDMAAQLETEREALVD
ECCCHHHHEEHEECCCHHEEHHHHCCCCCEEEEEEEEECCCHHHHHHHHHHHHHHHHHHH
VRKE
HCCC
>Mature Secondary Structure 
AVIKNYKTGMCEVRTYYKDLTGARKQKTKRGFAKKSEALEWERNFKLKEDQSISMSFKS
CEECCCCCCHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCHHHHHHH
FVDIYLTDLEPKIKRNTFLTKKHIIETKILPYFGKRKLDDIRTSNVIQWQNEIMKLKKDN
HHHEEEECCCCCHHHCHHHHHHHHHHHHHCCCCCCCHHHHHHCCCHHHHHHHHHHHHCCC
GELFSPTYLKTIHNQLSAILNHAVNMYGLKDNVARKAGTMGKEENKEMEFWTQEEFQAFL
CCEECHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHCCCCCCCCCCCHHCCHHHHHHHH
ECVVDKPISYYAFEILYWTGIREGELLALTLGDFNFEKKTLRINKSYQRLEGKDVITDQK
HHHHCCCHHHHEEEEEEEECCCCCCEEEEEECCCCCCCCEEEECCHHHHCCCCCCCCCCC
TPKSNRTIAMPDFLTIEMEDFIKNIYGIKMDDRIFTISKSYLHHEMDRGAKLAGVKRIRI
CCCCCCEEECCCEEEEEHHHHHHHHHCCCCCCEEEEEEHHHHHHHHHCCCHHHCEEEEEE
HGLRHSHISLLINLGFSALTIGERVGHESVDITYHYAHLFPTVQTDMAAQLETEREALVD
ECCCHHHHEEHEECCCHHEEHHHHCCCCCEEEEEEEEECCCHHHHHHHHHHHHHHHHHHH
VRKE
HCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: 9384377 [H]