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The map label for this gene is pelL [H]

Identifier: 238917655

GI number: 238917655

Start: 1801721

End: 1802620

Strand: Reverse

Name: pelL [H]

Synonym: EUBELI_01735

Alternate gene names: 238917655

Gene position: 1802620-1801721 (Counterclockwise)

Preceding gene: 238917656

Following gene: 238917653

Centisome position: 84.07

GC content: 37.33

Gene sequence:

>900_bases
GTGGTTAAGGCAGGTGGTATGTCTTTAGCAGATGCACTTAAGAAGGCTAAGTCAGGACAAACAGTAGTTATTGATGGAAC
AGTTAAGTCCGGAGCTGTTTCACTTCCAGCAGGTGTTAATCTTGCAGGAAAGAATAATGCGACAATAGATTTCTCACAGA
CAAGCGGAAGTTCAGGAAGAGGAATTACATTATCAGGTAATGGAAGCACACTTTCTAACATTACAGTTAAGAATGCTTCT
GATAATGGAATCTTTATTTCAGGTTCTAATAATACATTAAAGTATGTAACATGCTGTTATAATGAAGATGCAGGTTTTCA
GGTAAGCAACGGAGGAGCTAATAACAAGTTTTATAATTGCAAGTCCCATCATAATGCAGATGCTAAGGGTGAGAATGCTG
ATGGTTTTGCAGTAAAACTTCATTCAGGTGAAGGCAATTATTTTGAAAACTGTGTAGCTGAATACAATAGTGATGATGGC
TGGGATTGTTATGCAGCTCATGGAGCAGTAACACTTGTAAACTGTCAGGCTAACTACAATGGATACTGTGATGGAATATA
TGGTGATGGTAACGGATTTAAGATGGGTGGAGTAGATAATAAAACACCAGGAAAGGCAGCTCACCTTGATCCTCTTAACC
ATAAGCTTATTGGATGTACAGCTAAGGGAAACTATGCTAATGGTTTCGATAGAAACAACCAGAGTGGTGTTGTAACAATG
AAGAATTGTATTTCAGATTCTAATAAGGGTAATAATTATCACTGGCCACTTACAGGAAAACCATCTGCACTTGGTTATAA
AGTAACATTTGGCAAGGCTATTATTGAGGATTGTACTAATATTAATGGAAAAGTTAATATTACAGGAGCAACTCTTAAGG
GTAACTGTAAGGGATTCTAG

Upstream 100 bases:

>100_bases
TGGTTCTTCATCAGGAAGTTCATCAGGTTCAGGCAGCTCTTCATCAGGAAGCAGCTCATCTTCAGGTTCATCAACAGGTT
CATCTGTATCAGGTGATTAT

Downstream 100 bases:

>100_bases
GATAATGGCTGATTGTAATAATATGGTTTACGATACAATATTATAATTTATAACAAAATAATAAAACGCATGTCCGATTT
TTTTCAATCTGACATGCGTT

Product: polysaccharide lyase family 9-like pectate lyase

Products: NA

Alternate protein names: Pectate transeliminase [H]

Number of amino acids: Translated: 299; Mature: 299

Protein sequence:

>299_residues
MVKAGGMSLADALKKAKSGQTVVIDGTVKSGAVSLPAGVNLAGKNNATIDFSQTSGSSGRGITLSGNGSTLSNITVKNAS
DNGIFISGSNNTLKYVTCCYNEDAGFQVSNGGANNKFYNCKSHHNADAKGENADGFAVKLHSGEGNYFENCVAEYNSDDG
WDCYAAHGAVTLVNCQANYNGYCDGIYGDGNGFKMGGVDNKTPGKAAHLDPLNHKLIGCTAKGNYANGFDRNNQSGVVTM
KNCISDSNKGNNYHWPLTGKPSALGYKVTFGKAIIEDCTNINGKVNITGATLKGNCKGF

Sequences:

>Translated_299_residues
MVKAGGMSLADALKKAKSGQTVVIDGTVKSGAVSLPAGVNLAGKNNATIDFSQTSGSSGRGITLSGNGSTLSNITVKNAS
DNGIFISGSNNTLKYVTCCYNEDAGFQVSNGGANNKFYNCKSHHNADAKGENADGFAVKLHSGEGNYFENCVAEYNSDDG
WDCYAAHGAVTLVNCQANYNGYCDGIYGDGNGFKMGGVDNKTPGKAAHLDPLNHKLIGCTAKGNYANGFDRNNQSGVVTM
KNCISDSNKGNNYHWPLTGKPSALGYKVTFGKAIIEDCTNINGKVNITGATLKGNCKGF
>Mature_299_residues
MVKAGGMSLADALKKAKSGQTVVIDGTVKSGAVSLPAGVNLAGKNNATIDFSQTSGSSGRGITLSGNGSTLSNITVKNAS
DNGIFISGSNNTLKYVTCCYNEDAGFQVSNGGANNKFYNCKSHHNADAKGENADGFAVKLHSGEGNYFENCVAEYNSDDG
WDCYAAHGAVTLVNCQANYNGYCDGIYGDGNGFKMGGVDNKTPGKAAHLDPLNHKLIGCTAKGNYANGFDRNNQSGVVTM
KNCISDSNKGNNYHWPLTGKPSALGYKVTFGKAIIEDCTNINGKVNITGATLKGNCKGF

Specific function: Presents an endo-cleaving activity on polygalacturonate or partially methylated pectin [H]

COG id: NA

COG function: NA

Gene ontology:

Cell location: Secreted [H]

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: Belongs to the polysaccharide lyase 9 family [H]

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR006626
- InterPro:   IPR012334
- InterPro:   IPR011050 [H]

Pfam domain/function: NA

EC number: =4.2.2.2 [H]

Molecular weight: Translated: 31097; Mature: 31097

Theoretical pI: Translated: 8.20; Mature: 8.20

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

3.7 %Cys     (Translated Protein)
1.3 %Met     (Translated Protein)
5.0 %Cys+Met (Translated Protein)
3.7 %Cys     (Mature Protein)
1.3 %Met     (Mature Protein)
5.0 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MVKAGGMSLADALKKAKSGQTVVIDGTVKSGAVSLPAGVNLAGKNNATIDFSQTSGSSGR
CCCCCCCHHHHHHHHHCCCCEEEEECCCCCCEEECCCCEEEECCCCCEEEEECCCCCCCC
GITLSGNGSTLSNITVKNASDNGIFISGSNNTLKYVTCCYNEDAGFQVSNGGANNKFYNC
EEEEECCCCEEEEEEEECCCCCCEEEECCCCEEEEEEEEECCCCCEEEECCCCCCCEEEC
KSHHNADAKGENADGFAVKLHSGEGNYFENCVAEYNSDDGWDCYAAHGAVTLVNCQANYN
CCCCCCCCCCCCCCCEEEEEECCCCCHHHHHHHHCCCCCCEEEEECCCEEEEEEEECCCC
GYCDGIYGDGNGFKMGGVDNKTPGKAAHLDPLNHKLIGCTAKGNYANGFDRNNQSGVVTM
EEECCEEECCCCEEECCCCCCCCCCEEECCCCCCEEEEEEECCCCCCCCCCCCCCCEEEE
KNCISDSNKGNNYHWPLTGKPSALGYKVTFGKAIIEDCTNINGKVNITGATLKGNCKGF
HHHCCCCCCCCCEEECCCCCCCCEEEEEEECHHHHHHHHCCCCEEEEEEEEEECCCCCC
>Mature Secondary Structure
MVKAGGMSLADALKKAKSGQTVVIDGTVKSGAVSLPAGVNLAGKNNATIDFSQTSGSSGR
CCCCCCCHHHHHHHHHCCCCEEEEECCCCCCEEECCCCEEEECCCCCEEEEECCCCCCCC
GITLSGNGSTLSNITVKNASDNGIFISGSNNTLKYVTCCYNEDAGFQVSNGGANNKFYNC
EEEEECCCCEEEEEEEECCCCCCEEEECCCCEEEEEEEEECCCCCEEEECCCCCCCEEEC
KSHHNADAKGENADGFAVKLHSGEGNYFENCVAEYNSDDGWDCYAAHGAVTLVNCQANYN
CCCCCCCCCCCCCCCEEEEEECCCCCHHHHHHHHCCCCCCEEEEECCCEEEEEEEECCCC
GYCDGIYGDGNGFKMGGVDNKTPGKAAHLDPLNHKLIGCTAKGNYANGFDRNNQSGVVTM
EEECCEEECCCCEEECCCCCCCCCCEEECCCCCCEEEEEEECCCCCCCCCCCCCCCEEEE
KNCISDSNKGNNYHWPLTGKPSALGYKVTFGKAIIEDCTNINGKVNITGATLKGNCKGF
HHHCCCCCCCCCEEECCCCCCCCEEEEEEECHHHHHHHHCCCCEEEEEEEEEECCCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 8577252 [H]