| Definition | Eubacterium eligens ATCC 27750 chromosome, complete genome. |
|---|---|
| Accession | NC_012778 |
| Length | 2,144,190 |
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The map label for this gene is yeeO [H]
Identifier: 238917654
GI number: 238917654
Start: 1800244
End: 1801593
Strand: Direct
Name: yeeO [H]
Synonym: EUBELI_01734
Alternate gene names: 238917654
Gene position: 1800244-1801593 (Clockwise)
Preceding gene: 238917651
Following gene: 238917657
Centisome position: 83.96
GC content: 41.33
Gene sequence:
>1350_bases ATGACTAACAATTCAGACCACATTTTTTCTAATATAGATATAAGGAAACTTCTTATTCCTATCATGCTGGAAAATCTCTT AGCTTCACTTATGGGAACTGTTGATACTATGATGGTAAGTAATGTAGGTGCATCTGCTGTTTCAGCAGTATCGCTTGTTG ATTCCATCAATATTCTTGTAATACAGGCCTTGTCAGCACTTGCTGCCGGAGGTGCAATCCTGTGTTCCCAGTACATAGGA AGCAGCAACCCTAAAGGTGCCAACCGCGCTGCAAGACAGGTATTTCTTGTCATGACAGTGCTGTCGGTTTTCATATCAGC AATATGTCTCGTTCTTCGTGTACCAATGCTTAAGTTCATCTTTGGTTCTGTCGAAGCTGAGGTTATGGCTGATTCACAGG CATACTTTCTTTTTACACTGTTGTCATTTCCATTCATTGGCCTGTATGACGCTGGTGCGTCCATTATGAGAGCCCAGAAG GACAGCAAAAGCCCTATGACAATATCAATAATATCCAACTTCCTTAATATAGGTGGTAATGCAATTCTTATATTCGGACT TGGAATGGGCGTTGCAGGGGCTGCAATATCAACACTTGTATCAAGAGTTTTCTGTGCAGTTGTTGTAATTATTAAATTAA GAAATCCATCTCAGACCATATGCGTAAACAGATATTACGCAATCCGTCCCGACTGGGATTTAATTAAGAGAGTCTTATAT ATTGGTGTTCCTTCAGGCATTGAAAACAGCATGTTCCAGTTTGGAAAGCTGGCAATCCAGTCAACAGTTTCAACGCTTGG AACTGCTGCCATCGCTGCAAATGCTGTGACCAATATTCTTGAAAACCTTAACGGAGTTGCTGCACAGGGTGTAGGAATCG GACTTATGACTATAGTTGGCCAGTGCATTGGAGCCGGAAGAAAAGATGAAGCCATATATTATATAAAGAAGCTCAGTAAA ATGGCTGAAGCTGCCATTATTATAAGCTGTCTTGTTGTATTTGCATTGTGCAGGCCGATTACCATACTCGGTGGAATGGA AGCAGAAAGTGCAAGAATGTGTTTTGAGATGACTCTTTTCATAACAATAACCAAGCCAATATCATGGGTATTGTCATTCA TTCCGGCGTACGGAATGCGTGCTGCCGGAGACGTGAAATTTTCAATGATAACATCATGTGCAAGCATGTGGTTATGTCGT GTAAGCTTTACTATATTCTTATGCCGTGTATATGGCTTTGGTCCTATTGCTGTATGGATTGGAATGTTTGCCGACTGGTC TGTGCGTGGTATCGTGTTCACTATACGTTTCCACTCCCGCAGATGGCTTAATCATCATATAATTGACTGA
Upstream 100 bases:
>100_bases GCAACATGTTTTATCAACATATATACTTGACTTTATCTGTTCTTAGGAATAAATTATGTTAGTTGCATTTTAGTTTGTAA AATATTATGGAGTAATTTCA
Downstream 100 bases:
>100_bases TCTTAACGAATTGGATTAACAATAAAAAACGCATGTCAGATTGAAAAAAATCGGACATGCGTTTTATTATTTTGTTATAA ATTATAATATTGTATCGTAA
Product: MATE family multidrug resistance protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 449; Mature: 448
Protein sequence:
>449_residues MTNNSDHIFSNIDIRKLLIPIMLENLLASLMGTVDTMMVSNVGASAVSAVSLVDSINILVIQALSALAAGGAILCSQYIG SSNPKGANRAARQVFLVMTVLSVFISAICLVLRVPMLKFIFGSVEAEVMADSQAYFLFTLLSFPFIGLYDAGASIMRAQK DSKSPMTISIISNFLNIGGNAILIFGLGMGVAGAAISTLVSRVFCAVVVIIKLRNPSQTICVNRYYAIRPDWDLIKRVLY IGVPSGIENSMFQFGKLAIQSTVSTLGTAAIAANAVTNILENLNGVAAQGVGIGLMTIVGQCIGAGRKDEAIYYIKKLSK MAEAAIIISCLVVFALCRPITILGGMEAESARMCFEMTLFITITKPISWVLSFIPAYGMRAAGDVKFSMITSCASMWLCR VSFTIFLCRVYGFGPIAVWIGMFADWSVRGIVFTIRFHSRRWLNHHIID
Sequences:
>Translated_449_residues MTNNSDHIFSNIDIRKLLIPIMLENLLASLMGTVDTMMVSNVGASAVSAVSLVDSINILVIQALSALAAGGAILCSQYIG SSNPKGANRAARQVFLVMTVLSVFISAICLVLRVPMLKFIFGSVEAEVMADSQAYFLFTLLSFPFIGLYDAGASIMRAQK DSKSPMTISIISNFLNIGGNAILIFGLGMGVAGAAISTLVSRVFCAVVVIIKLRNPSQTICVNRYYAIRPDWDLIKRVLY IGVPSGIENSMFQFGKLAIQSTVSTLGTAAIAANAVTNILENLNGVAAQGVGIGLMTIVGQCIGAGRKDEAIYYIKKLSK MAEAAIIISCLVVFALCRPITILGGMEAESARMCFEMTLFITITKPISWVLSFIPAYGMRAAGDVKFSMITSCASMWLCR VSFTIFLCRVYGFGPIAVWIGMFADWSVRGIVFTIRFHSRRWLNHHIID >Mature_448_residues TNNSDHIFSNIDIRKLLIPIMLENLLASLMGTVDTMMVSNVGASAVSAVSLVDSINILVIQALSALAAGGAILCSQYIGS SNPKGANRAARQVFLVMTVLSVFISAICLVLRVPMLKFIFGSVEAEVMADSQAYFLFTLLSFPFIGLYDAGASIMRAQKD SKSPMTISIISNFLNIGGNAILIFGLGMGVAGAAISTLVSRVFCAVVVIIKLRNPSQTICVNRYYAIRPDWDLIKRVLYI GVPSGIENSMFQFGKLAIQSTVSTLGTAAIAANAVTNILENLNGVAAQGVGIGLMTIVGQCIGAGRKDEAIYYIKKLSKM AEAAIIISCLVVFALCRPITILGGMEAESARMCFEMTLFITITKPISWVLSFIPAYGMRAAGDVKFSMITSCASMWLCRV SFTIFLCRVYGFGPIAVWIGMFADWSVRGIVFTIRFHSRRWLNHHIID
Specific function: Unknown
COG id: COG0534
COG function: function code V; Na+-driven multidrug efflux pump
Gene ontology:
Cell location: Cell inner membrane; Multi-pass membrane protein (Potential) [H]
Metaboloic importance: Unknown [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the multi antimicrobial extrusion (MATE) (TC 2.A.66.1) family [H]
Homologues:
Organism=Escherichia coli, GI226510954, Length=449, Percent_Identity=28.9532293986637, Blast_Score=182, Evalue=5e-47,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR002528 [H]
Pfam domain/function: PF01554 MatE [H]
EC number: NA
Molecular weight: Translated: 48508; Mature: 48377
Theoretical pI: Translated: 9.14; Mature: 9.14
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
2.4 %Cys (Translated Protein) 4.7 %Met (Translated Protein) 7.1 %Cys+Met (Translated Protein) 2.5 %Cys (Mature Protein) 4.5 %Met (Mature Protein) 6.9 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MTNNSDHIFSNIDIRKLLIPIMLENLLASLMGTVDTMMVSNVGASAVSAVSLVDSINILV CCCCCCCEEECCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHH IQALSALAAGGAILCSQYIGSSNPKGANRAARQVFLVMTVLSVFISAICLVLRVPMLKFI HHHHHHHHCCHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH FGSVEAEVMADSQAYFLFTLLSFPFIGLYDAGASIMRAQKDSKSPMTISIISNFLNIGGN HHCCHHHHHCCCHHHHHHHHHHCCCHHHHHCCHHHHHHHCCCCCCEEHHHHHHHHHCCCC AILIFGLGMGVAGAAISTLVSRVFCAVVVIIKLRNPSQTICVNRYYAIRPDWDLIKRVLY EEEEEECCCCHHHHHHHHHHHHHHHHHHHHHHCCCCCCEEEEEEEEEECCCHHHHHHHHH IGVPSGIENSMFQFGKLAIQSTVSTLGTAAIAANAVTNILENLNGVAAQGVGIGLMTIVG HCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHCCCCHHHHHHHH QCIGAGRKDEAIYYIKKLSKMAEAAIIISCLVVFALCRPITILGGMEAESARMCFEMTLF HHHCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHEEEEEE ITITKPISWVLSFIPAYGMRAAGDVKFSMITSCASMWLCRVSFTIFLCRVYGFGPIAVWI EEEHHHHHHHHHHHHHCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHH GMFADWSVRGIVFTIRFHSRRWLNHHIID HHHCCCCCCEEEEEEEECCHHHHHCCCCC >Mature Secondary Structure TNNSDHIFSNIDIRKLLIPIMLENLLASLMGTVDTMMVSNVGASAVSAVSLVDSINILV CCCCCCEEECCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHH IQALSALAAGGAILCSQYIGSSNPKGANRAARQVFLVMTVLSVFISAICLVLRVPMLKFI HHHHHHHHCCHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH FGSVEAEVMADSQAYFLFTLLSFPFIGLYDAGASIMRAQKDSKSPMTISIISNFLNIGGN HHCCHHHHHCCCHHHHHHHHHHCCCHHHHHCCHHHHHHHCCCCCCEEHHHHHHHHHCCCC AILIFGLGMGVAGAAISTLVSRVFCAVVVIIKLRNPSQTICVNRYYAIRPDWDLIKRVLY EEEEEECCCCHHHHHHHHHHHHHHHHHHHHHHCCCCCCEEEEEEEEEECCCHHHHHHHHH IGVPSGIENSMFQFGKLAIQSTVSTLGTAAIAANAVTNILENLNGVAAQGVGIGLMTIVG HCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHCCCCHHHHHHHH QCIGAGRKDEAIYYIKKLSKMAEAAIIISCLVVFALCRPITILGGMEAESARMCFEMTLF HHHCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHEEEEEE ITITKPISWVLSFIPAYGMRAAGDVKFSMITSCASMWLCRVSFTIFLCRVYGFGPIAVWI EEEHHHHHHHHHHHHHCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHH GMFADWSVRGIVFTIRFHSRRWLNHHIID HHHCCCCCCEEEEEEEECCHHHHHCCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 6.0
TargetDB status: NA
Availability: NA
References: 9097040; 9278503 [H]