| Definition | Eubacterium eligens ATCC 27750 chromosome, complete genome. |
|---|---|
| Accession | NC_012778 |
| Length | 2,144,190 |
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The map label for this gene is yegE [C]
Identifier: 238917386
GI number: 238917386
Start: 1516056
End: 1517516
Strand: Reverse
Name: yegE [C]
Synonym: EUBELI_01463
Alternate gene names: 238917386
Gene position: 1517516-1516056 (Counterclockwise)
Preceding gene: 238917387
Following gene: 238917385
Centisome position: 70.77
GC content: 33.88
Gene sequence:
>1461_bases ATGAACATGGTATATCTGTTATTGTATGTAATTGCAGCAATGATTGTAGGATTTGTGATGGTTAAGACATATCAGGAGAA GGACAGAATGAGAAGGTATGTAATAGTCTTGCTGGCCCTTGCAATGATATGTATTGTGAGTTATTCTGTGAATTTCATGA CAGATAATTATAATGTAATGTCTGCGGCTACAAGTATTATGATGGCTGCACAGGATTTTCTGCTTGTTTCACTTTTTATA TATACAACAGAATTTGCAAGAATAAGCAATAAGGTAACTAAAGTAATGACAATTGCGGCTTTTGTAATTGCAATAATTGA TTCTGTTGTATTTATTGCGAATATATTTAATGAAATTGCTGTTAAGTACAGTCTGGTAAAATGTGACGGAATATATGTAC TTGGATATGAAGGGGAATTGTGGTTTGGCATACATGCTGTTATGAGCATGATTATAACAGCATGTATAATTGCTGTATTA GTTATAAAATGTATACATATACCAGGGGCTTACTGGGGAAGATATATTGTTATGGCAGCAGGTTTGGCAATTATTATACT TATTAAATGTGTATTCATATATAAGATAATAGATTTAAGATTTGATATATCAATTTTTTTGTATGCATTTATAGGAGTAA TGGTTTACTGGAATACATTCTGGTATTCAAAAAAGAATATGCTCACAATAACTCATGCTATGATTATAGATCATATGCAT GTTCCTGTTATTTTGTTTGATTATGAAGGGGTGCTTGCGGATTTTAATACATCTATGAAGGAATTGTTTGGGAATCTGGA ATATGATGACAGGGAGCAGACAATTGACTGGTTTTTTAAGAGCAAATGTGTTCCGGTTATGGCAGGACAAAATACATTCC AGTGGAAACTGGATAATAAAGCTTATGACTGCAGAATAGAGAAATTATTGGATGATAAGAAAAGGCTGCTTGGAACAATC ATTGTAATGCAGGATGTTACAGAACTAAAAAGGGCATATACAGAACTTGAAAATATGGTTATATATGACCGGCTTACTGG CGTTTACAGTATGTACAGCTTTATGGAGCATTGTAAGTCTTATGATGGGTATAAGGGAAATATTGCGGTAGCAGTGTGCG ATATTGACGGACTTTCAGAAATTAATTTTAAATACGGACAGAAGGCAGGCAATTCTGTACTTGTAAATGTGGCAGGAGTA TTAAAGAAAAAGCTTAAGGATTCCGCATATATTGCAAGACTTAATGAAGGAGATTTTGTGGCGGTAATTAAGAATATTTC ATTGAAAAAAGCTGACATCATATTTGCAGAAATAGAAAAAGCAGTAAGCACGGAATGTTCTGATGATAAGATGAAAGTTT CCATGAAATACGGTATTGCAATGAGAAACTCGACTAATGGATGGATGATGGATGTTGTTCATGAAGCGGTTGGCAGAATG AAGGGAAAGAAGGACAGGTAA
Upstream 100 bases:
>100_bases GTCGGATGATTTGTCTGACGGAGATTTTTTAGTTGAGTAACACATAATTAAATGTTAAAATCTCTTTATATGCTAAAAGC GTATTTTGGGGGATAAAATA
Downstream 100 bases:
>100_bases ATGAAATTCGATGGAATAAAAAAGGTTTCAGAGGGAAGATTCATAAACAGATACGATCTGTATTATACAACTGAGGATGA TAAGAAAAAGGTTTACGAAA
Product: hypothetical protein
Products: NA
Alternate protein names: Diguanylate Cyclase And Metal Dependent Phosphohydrolase; Diguanylate Cyclase; HD-GYP Domain-Containing Protein; GGDEF Domain Protein; Sensory Box Protein; PAS/PAC Sensor Protein
Number of amino acids: Translated: 486; Mature: 486
Protein sequence:
>486_residues MNMVYLLLYVIAAMIVGFVMVKTYQEKDRMRRYVIVLLALAMICIVSYSVNFMTDNYNVMSAATSIMMAAQDFLLVSLFI YTTEFARISNKVTKVMTIAAFVIAIIDSVVFIANIFNEIAVKYSLVKCDGIYVLGYEGELWFGIHAVMSMIITACIIAVL VIKCIHIPGAYWGRYIVMAAGLAIIILIKCVFIYKIIDLRFDISIFLYAFIGVMVYWNTFWYSKKNMLTITHAMIIDHMH VPVILFDYEGVLADFNTSMKELFGNLEYDDREQTIDWFFKSKCVPVMAGQNTFQWKLDNKAYDCRIEKLLDDKKRLLGTI IVMQDVTELKRAYTELENMVIYDRLTGVYSMYSFMEHCKSYDGYKGNIAVAVCDIDGLSEINFKYGQKAGNSVLVNVAGV LKKKLKDSAYIARLNEGDFVAVIKNISLKKADIIFAEIEKAVSTECSDDKMKVSMKYGIAMRNSTNGWMMDVVHEAVGRM KGKKDR
Sequences:
>Translated_486_residues MNMVYLLLYVIAAMIVGFVMVKTYQEKDRMRRYVIVLLALAMICIVSYSVNFMTDNYNVMSAATSIMMAAQDFLLVSLFI YTTEFARISNKVTKVMTIAAFVIAIIDSVVFIANIFNEIAVKYSLVKCDGIYVLGYEGELWFGIHAVMSMIITACIIAVL VIKCIHIPGAYWGRYIVMAAGLAIIILIKCVFIYKIIDLRFDISIFLYAFIGVMVYWNTFWYSKKNMLTITHAMIIDHMH VPVILFDYEGVLADFNTSMKELFGNLEYDDREQTIDWFFKSKCVPVMAGQNTFQWKLDNKAYDCRIEKLLDDKKRLLGTI IVMQDVTELKRAYTELENMVIYDRLTGVYSMYSFMEHCKSYDGYKGNIAVAVCDIDGLSEINFKYGQKAGNSVLVNVAGV LKKKLKDSAYIARLNEGDFVAVIKNISLKKADIIFAEIEKAVSTECSDDKMKVSMKYGIAMRNSTNGWMMDVVHEAVGRM KGKKDR >Mature_486_residues MNMVYLLLYVIAAMIVGFVMVKTYQEKDRMRRYVIVLLALAMICIVSYSVNFMTDNYNVMSAATSIMMAAQDFLLVSLFI YTTEFARISNKVTKVMTIAAFVIAIIDSVVFIANIFNEIAVKYSLVKCDGIYVLGYEGELWFGIHAVMSMIITACIIAVL VIKCIHIPGAYWGRYIVMAAGLAIIILIKCVFIYKIIDLRFDISIFLYAFIGVMVYWNTFWYSKKNMLTITHAMIIDHMH VPVILFDYEGVLADFNTSMKELFGNLEYDDREQTIDWFFKSKCVPVMAGQNTFQWKLDNKAYDCRIEKLLDDKKRLLGTI IVMQDVTELKRAYTELENMVIYDRLTGVYSMYSFMEHCKSYDGYKGNIAVAVCDIDGLSEINFKYGQKAGNSVLVNVAGV LKKKLKDSAYIARLNEGDFVAVIKNISLKKADIIFAEIEKAVSTECSDDKMKVSMKYGIAMRNSTNGWMMDVVHEAVGRM KGKKDR
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasm [C]
Metaboloic importance: Non_Essential [C]
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 55436; Mature: 55436
Theoretical pI: Translated: 8.21; Mature: 8.21
Prosite motif: PS00095 C5_MTASE_2 ; PS50887 GGDEF
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
2.1 %Cys (Translated Protein) 6.2 %Met (Translated Protein) 8.2 %Cys+Met (Translated Protein) 2.1 %Cys (Mature Protein) 6.2 %Met (Mature Protein) 8.2 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MNMVYLLLYVIAAMIVGFVMVKTYQEKDRMRRYVIVLLALAMICIVSYSVNFMTDNYNVM CCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHEEEECCCHHH SAATSIMMAAQDFLLVSLFIYTTEFARISNKVTKVMTIAAFVIAIIDSVVFIANIFNEIA HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH VKYSLVKCDGIYVLGYEGELWFGIHAVMSMIITACIIAVLVIKCIHIPGAYWGRYIVMAA HEEEEEEECCEEEEEECCCHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHH GLAIIILIKCVFIYKIIDLRFDISIFLYAFIGVMVYWNTFWYSKKNMLTITHAMIIDHMH HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHEECCCCEEEEHHHHHHHCCC VPVILFDYEGVLADFNTSMKELFGNLEYDDREQTIDWFFKSKCVPVMAGQNTFQWKLDNK CCEEEEECCCHHHHCCHHHHHHHCCCCCCCHHHHHHHHHHCCCEEEEECCCEEEEEECCC AYDCRIEKLLDDKKRLLGTIIVMQDVTELKRAYTELENMVIYDRLTGVYSMYSFMEHCKS HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHEEHHHHHHHHHHHHHHHHHHHC YDGYKGNIAVAVCDIDGLSEINFKYGQKAGNSVLVNVAGVLKKKLKDSAYIARLNEGDFV CCCCCCCEEEEEECCCCCCCCCCHHCCCCCCEEEEEHHHHHHHHHCCCCEEEEECCCCEE AVIKNISLKKADIIFAEIEKAVSTECSDDKMKVSMKYGIAMRNSTNGWMMDVVHEAVGRM EEEECCCCCHHHHHHHHHHHHHCCCCCCCCEEEEEEECEEEECCCCCHHHHHHHHHHHHC KGKKDR CCCCCC >Mature Secondary Structure MNMVYLLLYVIAAMIVGFVMVKTYQEKDRMRRYVIVLLALAMICIVSYSVNFMTDNYNVM CCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHEEEECCCHHH SAATSIMMAAQDFLLVSLFIYTTEFARISNKVTKVMTIAAFVIAIIDSVVFIANIFNEIA HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH VKYSLVKCDGIYVLGYEGELWFGIHAVMSMIITACIIAVLVIKCIHIPGAYWGRYIVMAA HEEEEEEECCEEEEEECCCHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHH GLAIIILIKCVFIYKIIDLRFDISIFLYAFIGVMVYWNTFWYSKKNMLTITHAMIIDHMH HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHEECCCCEEEEHHHHHHHCCC VPVILFDYEGVLADFNTSMKELFGNLEYDDREQTIDWFFKSKCVPVMAGQNTFQWKLDNK CCEEEEECCCHHHHCCHHHHHHHCCCCCCCHHHHHHHHHHCCCEEEEECCCEEEEEECCC AYDCRIEKLLDDKKRLLGTIIVMQDVTELKRAYTELENMVIYDRLTGVYSMYSFMEHCKS HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHEEHHHHHHHHHHHHHHHHHHHC YDGYKGNIAVAVCDIDGLSEINFKYGQKAGNSVLVNVAGVLKKKLKDSAYIARLNEGDFV CCCCCCCEEEEEECCCCCCCCCCHHCCCCCCEEEEEHHHHHHHHHCCCCEEEEECCCCEE AVIKNISLKKADIIFAEIEKAVSTECSDDKMKVSMKYGIAMRNSTNGWMMDVVHEAVGRM EEEECCCCCHHHHHHHHHHHHHCCCCCCCCEEEEEEECEEEECCCCCHHHHHHHHHHHHC KGKKDR CCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: NA