| Definition | Eubacterium eligens ATCC 27750 chromosome, complete genome. |
|---|---|
| Accession | NC_012778 |
| Length | 2,144,190 |
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The map label for this gene is cshA [H]
Identifier: 238917309
GI number: 238917309
Start: 1425072
End: 1426787
Strand: Reverse
Name: cshA [H]
Synonym: EUBELI_01384
Alternate gene names: 238917309
Gene position: 1426787-1425072 (Counterclockwise)
Preceding gene: 238917314
Following gene: 238917308
Centisome position: 66.54
GC content: 39.45
Gene sequence:
>1716_bases ATGAAATTTGATGAATTAAATATTGATGAAAGAATTTTAAGAGCGGTAGAGGATATGGGCTTTGAGGAGACATCTCCTAT ACAGACACAGGCCATTCCTGCAGTATTGGAAGGAATTGATGTTATCGGACAGGCACAGACCGGAACAGGTAAGACTGCTG CGTACTCTATCCCAATGTTACAGAAGATTAATCCAGATGTTAAGAAACCACAGGCAATTGTACTCTGCCCTACAAGAGAG CTTGCAGTACAGGTTGCAGAAGAGATAAGAAAGCTTGCCAAGTACATGAGCGACATTAAGGTGTTACCGGTATATGGTGG ACAGGAGATTGTAAGACAGATTAAGTCTTTAAAAGCCGGCGTACAGATTATTGTTGGAACTCCGGGACGAGTTATGGACC ATATGAGAAGAAAGACAGTTAAGTTTGATTCTGTTTCTATGGTTATATTAGATGAAGCTGATGAGATGCTTGATATGGGA TTCCGTGAGGACATGGAAACAATTCTTACGGAGACACCAGAGGAAAGACAGACAGTTCTTTTCTCAGCTACAATGCCTAA GCCTATCATGGAGATTGCAAGAAAATTCCAGAAGGACGCCAGGATTATCAAGGTTGTAAGAAAAGAACTTACAGTCTCTA ACATTGATCAGTTCTATTATGAAGTAAGGCCTAAGAATAAAACAGAAATCTTAAGCCGTCTTATTGATATATACAATCCT AAGCTGTCAGTTGTGTTCTGTAACACCAAGAGACAGGTAGACGAGCTTATATCAGAGCTTAAGGGCAGAGGATATTTTGC TGACGGTATACACGGAGATATGAAACAGCAACAGAGAGACCGTGTAATGGACGATTTCAGAAGTGGAAAAACAGAAATTC TTATTGCAACTGATGTTGCGGCAAGAGGAATTGATGTTGACGGAGTTGATATAGTATTTAACTATGACCTTCCACAGGAC GAAGAATATTATGTACACAGAATAGGAAGAACAGGAAGGGCTGGAAAATCAGGACTTGCACTTTCATTTATATCTGGAAG AGAAGTATATAAGTTAAAGGATATCGAAAGATATTGCAAGACTAAGATTCTAGCAAAGCCAATTCCATCACTTGATGATG TCAAGAACACCAAGATGGATGGTATATTTGACAAGATTAAAGAGATGATTGAAGCTGATGAGCACAGAGCCATGCTTGAT ATGGTTGAGGAGCATGTTAATCAGGAAGACTACACATCAATGGATATGGCAGCAGCACTTCTTAAGATGATAGTAGGAGA TACATTGGACAGAATCGATGAGGTTGAAAATTTCCATTTTGATGAAAATGCGGATACTTCAAGAATGGTAAGACTCTTTA TTAATGTTGGTAAGAAGGACAAGATTACACCAGCCAATATTCTTGGAGCGATTGCAGGAGAATCTGGAATGCCGGGAAGA CTTGTCGGTGCAATTGATATGATGGATAATTATACATTTGTTGATGTTCCTGCAAAGCATGCGGAAGCAGTACTTGCAGC AATGAATGACAATGTGCTTATCAAGGGCAGAAAGGTTAATGTAGAGAAGGCAAATGTATCTGCAAAGCCTGCAAGAAAAT CCAAGTCAAAGCCAGATACAAGAAGAAAAAAAGACGAGTCCCGTGGAAAACATGACAAACTTAAAGAACGCAGAAGTAAA GGCGGCAAGGTAAGAAGAAATGGAGAAAAGTATTAA
Upstream 100 bases:
>100_bases CATCGATTATATATGTACAAGAAATAAAATGCAATTATTACTTTGACTTATGGCTTTCTGTAATGTAAAATTAACAAGTT ATAGAAATGGAGATTAAAGA
Downstream 100 bases:
>100_bases GCTTACCAGTCTTAACAGAAAAGAAGCGTTAAGATATCTGGGATATAAGAAAAATGCACCTGATGAGCGGGTGGAAGAGC TTATGGATGAATGTGAGGAG
Product: ATP-dependent RNA helicase DeaD
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 571; Mature: 571
Protein sequence:
>571_residues MKFDELNIDERILRAVEDMGFEETSPIQTQAIPAVLEGIDVIGQAQTGTGKTAAYSIPMLQKINPDVKKPQAIVLCPTRE LAVQVAEEIRKLAKYMSDIKVLPVYGGQEIVRQIKSLKAGVQIIVGTPGRVMDHMRRKTVKFDSVSMVILDEADEMLDMG FREDMETILTETPEERQTVLFSATMPKPIMEIARKFQKDARIIKVVRKELTVSNIDQFYYEVRPKNKTEILSRLIDIYNP KLSVVFCNTKRQVDELISELKGRGYFADGIHGDMKQQQRDRVMDDFRSGKTEILIATDVAARGIDVDGVDIVFNYDLPQD EEYYVHRIGRTGRAGKSGLALSFISGREVYKLKDIERYCKTKILAKPIPSLDDVKNTKMDGIFDKIKEMIEADEHRAMLD MVEEHVNQEDYTSMDMAAALLKMIVGDTLDRIDEVENFHFDENADTSRMVRLFINVGKKDKITPANILGAIAGESGMPGR LVGAIDMMDNYTFVDVPAKHAEAVLAAMNDNVLIKGRKVNVEKANVSAKPARKSKSKPDTRRKKDESRGKHDKLKERRSK GGKVRRNGEKY
Sequences:
>Translated_571_residues MKFDELNIDERILRAVEDMGFEETSPIQTQAIPAVLEGIDVIGQAQTGTGKTAAYSIPMLQKINPDVKKPQAIVLCPTRE LAVQVAEEIRKLAKYMSDIKVLPVYGGQEIVRQIKSLKAGVQIIVGTPGRVMDHMRRKTVKFDSVSMVILDEADEMLDMG FREDMETILTETPEERQTVLFSATMPKPIMEIARKFQKDARIIKVVRKELTVSNIDQFYYEVRPKNKTEILSRLIDIYNP KLSVVFCNTKRQVDELISELKGRGYFADGIHGDMKQQQRDRVMDDFRSGKTEILIATDVAARGIDVDGVDIVFNYDLPQD EEYYVHRIGRTGRAGKSGLALSFISGREVYKLKDIERYCKTKILAKPIPSLDDVKNTKMDGIFDKIKEMIEADEHRAMLD MVEEHVNQEDYTSMDMAAALLKMIVGDTLDRIDEVENFHFDENADTSRMVRLFINVGKKDKITPANILGAIAGESGMPGR LVGAIDMMDNYTFVDVPAKHAEAVLAAMNDNVLIKGRKVNVEKANVSAKPARKSKSKPDTRRKKDESRGKHDKLKERRSK GGKVRRNGEKY >Mature_571_residues MKFDELNIDERILRAVEDMGFEETSPIQTQAIPAVLEGIDVIGQAQTGTGKTAAYSIPMLQKINPDVKKPQAIVLCPTRE LAVQVAEEIRKLAKYMSDIKVLPVYGGQEIVRQIKSLKAGVQIIVGTPGRVMDHMRRKTVKFDSVSMVILDEADEMLDMG FREDMETILTETPEERQTVLFSATMPKPIMEIARKFQKDARIIKVVRKELTVSNIDQFYYEVRPKNKTEILSRLIDIYNP KLSVVFCNTKRQVDELISELKGRGYFADGIHGDMKQQQRDRVMDDFRSGKTEILIATDVAARGIDVDGVDIVFNYDLPQD EEYYVHRIGRTGRAGKSGLALSFISGREVYKLKDIERYCKTKILAKPIPSLDDVKNTKMDGIFDKIKEMIEADEHRAMLD MVEEHVNQEDYTSMDMAAALLKMIVGDTLDRIDEVENFHFDENADTSRMVRLFINVGKKDKITPANILGAIAGESGMPGR LVGAIDMMDNYTFVDVPAKHAEAVLAAMNDNVLIKGRKVNVEKANVSAKPARKSKSKPDTRRKKDESRGKHDKLKERRSK GGKVRRNGEKY
Specific function: May work in conjunction with the cold shock proteins to ensure proper initiation of transcription at low and optimal temperatures. Unwinds dsRNA in both 5'- and 3'-directions and shows RNA-dependent ATPase activity [H]
COG id: COG0513
COG function: function code LKJ; Superfamily II DNA and RNA helicases
Gene ontology:
Cell location: Cytoplasm, nucleoid [H]
Metaboloic importance: Non_Essential [C]
Operon status: Not Known
Operon components: None
Similarity: Contains 1 helicase C-terminal domain [H]
Homologues:
Organism=Homo sapiens, GI7661920, Length=371, Percent_Identity=42.3180592991914, Blast_Score=316, Evalue=3e-86, Organism=Homo sapiens, GI4503529, Length=373, Percent_Identity=42.0911528150134, Blast_Score=279, Evalue=4e-75, Organism=Homo sapiens, GI83700235, Length=372, Percent_Identity=41.9354838709677, Blast_Score=278, Evalue=1e-74, Organism=Homo sapiens, GI164664518, Length=369, Percent_Identity=37.1273712737127, Blast_Score=275, Evalue=1e-73, Organism=Homo sapiens, GI301171475, Length=377, Percent_Identity=40.5835543766578, Blast_Score=259, Evalue=3e-69, Organism=Homo sapiens, GI87196351, Length=376, Percent_Identity=40.6914893617021, Blast_Score=259, Evalue=4e-69, Organism=Homo sapiens, GI301171467, Length=376, Percent_Identity=40.6914893617021, Blast_Score=259, Evalue=4e-69, Organism=Homo sapiens, GI4758138, Length=364, Percent_Identity=39.2857142857143, Blast_Score=254, Evalue=2e-67, Organism=Homo sapiens, GI169881239, Length=376, Percent_Identity=40.4255319148936, Blast_Score=252, Evalue=7e-67, Organism=Homo sapiens, GI13514809, Length=376, Percent_Identity=40.4255319148936, Blast_Score=252, Evalue=7e-67, Organism=Homo sapiens, GI45446747, Length=364, Percent_Identity=36.2637362637363, Blast_Score=249, Evalue=5e-66, Organism=Homo sapiens, GI45446743, Length=364, Percent_Identity=36.2637362637363, Blast_Score=249, Evalue=5e-66, Organism=Homo sapiens, GI148613856, Length=352, Percent_Identity=39.7727272727273, Blast_Score=246, Evalue=4e-65, Organism=Homo sapiens, GI38201710, Length=352, Percent_Identity=39.7727272727273, Blast_Score=246, Evalue=4e-65, Organism=Homo sapiens, GI13129006, Length=401, Percent_Identity=35.1620947630923, Blast_Score=244, Evalue=1e-64, Organism=Homo sapiens, GI41327773, Length=352, Percent_Identity=38.3522727272727, Blast_Score=243, Evalue=5e-64, Organism=Homo sapiens, GI4758112, Length=346, Percent_Identity=36.1271676300578, Blast_Score=242, Evalue=9e-64, Organism=Homo sapiens, GI18375623, Length=346, Percent_Identity=36.1271676300578, Blast_Score=242, Evalue=9e-64, Organism=Homo sapiens, GI222352149, Length=350, Percent_Identity=38.2857142857143, Blast_Score=240, Evalue=3e-63, Organism=Homo sapiens, GI21040371, Length=346, Percent_Identity=35.5491329479769, Blast_Score=239, Evalue=5e-63, Organism=Homo sapiens, GI50659095, Length=397, Percent_Identity=33.7531486146096, Blast_Score=239, Evalue=5e-63, Organism=Homo sapiens, GI216548263, Length=358, Percent_Identity=34.6368715083799, Blast_Score=236, Evalue=5e-62, Organism=Homo sapiens, GI262118318, Length=358, Percent_Identity=34.6368715083799, Blast_Score=236, Evalue=5e-62, Organism=Homo sapiens, GI41327771, Length=408, Percent_Identity=35.0490196078431, Blast_Score=236, Evalue=6e-62, Organism=Homo sapiens, GI262231852, Length=358, Percent_Identity=34.6368715083799, Blast_Score=235, Evalue=7e-62, Organism=Homo sapiens, GI13518015, Length=358, Percent_Identity=34.6368715083799, Blast_Score=235, Evalue=7e-62, Organism=Homo sapiens, GI20149629, Length=372, Percent_Identity=33.8709677419355, Blast_Score=235, Evalue=8e-62, Organism=Homo sapiens, GI224593278, Length=432, Percent_Identity=34.0277777777778, Blast_Score=233, Evalue=5e-61, Organism=Homo sapiens, GI21071032, Length=356, Percent_Identity=36.2359550561798, Blast_Score=232, Evalue=8e-61, Organism=Homo sapiens, GI31542656, Length=369, Percent_Identity=35.230352303523, Blast_Score=230, Evalue=3e-60, Organism=Homo sapiens, GI55749865, Length=345, Percent_Identity=36.5217391304348, Blast_Score=228, Evalue=1e-59, Organism=Homo sapiens, GI6005743, Length=358, Percent_Identity=36.0335195530726, Blast_Score=224, Evalue=2e-58, Organism=Homo sapiens, GI8922886, Length=358, Percent_Identity=35.7541899441341, Blast_Score=223, Evalue=3e-58, Organism=Homo sapiens, GI164419732, Length=356, Percent_Identity=37.0786516853933, Blast_Score=222, Evalue=9e-58, Organism=Homo sapiens, GI188035877, Length=363, Percent_Identity=33.6088154269972, Blast_Score=216, Evalue=5e-56, Organism=Homo sapiens, GI62241022, Length=343, Percent_Identity=36.1516034985423, Blast_Score=213, Evalue=3e-55, Organism=Homo sapiens, GI51094101, Length=406, Percent_Identity=30.5418719211823, Blast_Score=212, Evalue=6e-55, Organism=Homo sapiens, GI164419743, Length=406, Percent_Identity=30.5418719211823, Blast_Score=212, Evalue=6e-55, Organism=Homo sapiens, GI62241024, Length=319, Percent_Identity=36.0501567398119, Blast_Score=204, Evalue=2e-52, Organism=Homo sapiens, GI41327776, Length=372, Percent_Identity=31.1827956989247, Blast_Score=197, Evalue=2e-50, Organism=Homo sapiens, GI256223453, Length=384, Percent_Identity=31.7708333333333, Blast_Score=197, Evalue=2e-50, Organism=Homo sapiens, GI41327779, Length=455, Percent_Identity=30.989010989011, Blast_Score=194, Evalue=3e-49, Organism=Homo sapiens, GI13514831, Length=351, Percent_Identity=32.7635327635328, Blast_Score=192, Evalue=6e-49, Organism=Homo sapiens, GI38569505, Length=352, Percent_Identity=33.2386363636364, Blast_Score=186, Evalue=4e-47, Organism=Homo sapiens, GI38569503, Length=352, Percent_Identity=33.2386363636364, Blast_Score=186, Evalue=4e-47, Organism=Homo sapiens, GI9506931, Length=395, Percent_Identity=30.379746835443, Blast_Score=185, Evalue=1e-46, Organism=Homo sapiens, GI38327634, Length=418, Percent_Identity=30.3827751196172, Blast_Score=183, Evalue=4e-46, Organism=Homo sapiens, GI17505907, Length=415, Percent_Identity=29.1566265060241, Blast_Score=174, Evalue=1e-43, Organism=Homo sapiens, GI256773275, Length=388, Percent_Identity=27.8350515463918, Blast_Score=150, Evalue=4e-36, Organism=Homo sapiens, GI9966805, Length=357, Percent_Identity=31.0924369747899, Blast_Score=137, Evalue=2e-32, Organism=Homo sapiens, GI4826686, Length=334, Percent_Identity=29.940119760479, Blast_Score=135, Evalue=1e-31, Organism=Homo sapiens, GI20336298, Length=363, Percent_Identity=27.2727272727273, Blast_Score=127, Evalue=3e-29, Organism=Homo sapiens, GI154759257, Length=394, Percent_Identity=25.1269035532995, Blast_Score=100, Evalue=4e-21, Organism=Homo sapiens, GI51242943, Length=375, Percent_Identity=23.4666666666667, Blast_Score=74, Evalue=5e-13, Organism=Homo sapiens, GI51242947, Length=375, Percent_Identity=23.4666666666667, Blast_Score=74, Evalue=5e-13, Organism=Homo sapiens, GI4557365, Length=348, Percent_Identity=24.1379310344828, Blast_Score=72, Evalue=1e-12, Organism=Homo sapiens, GI148612816, Length=375, Percent_Identity=23.4666666666667, Blast_Score=71, Evalue=3e-12, Organism=Homo sapiens, GI14591902, Length=335, Percent_Identity=20.5970149253731, Blast_Score=69, Evalue=1e-11, Organism=Homo sapiens, GI14591904, Length=335, Percent_Identity=20.5970149253731, Blast_Score=69, Evalue=1e-11, Organism=Escherichia coli, GI87082221, Length=428, Percent_Identity=43.4579439252336, Blast_Score=377, Evalue=1e-105, Organism=Escherichia coli, GI1787605, Length=369, Percent_Identity=41.1924119241192, Blast_Score=313, Evalue=3e-86, Organism=Escherichia coli, GI1787016, Length=388, Percent_Identity=43.0412371134021, Blast_Score=307, Evalue=1e-84, Organism=Escherichia coli, GI1790214, Length=371, Percent_Identity=37.7358490566038, Blast_Score=256, Evalue=2e-69, Organism=Escherichia coli, GI1788930, Length=363, Percent_Identity=37.1900826446281, Blast_Score=220, Evalue=2e-58, Organism=Escherichia coli, GI48994977, Length=373, Percent_Identity=22.5201072386059, Blast_Score=73, Evalue=5e-14, Organism=Caenorhabditis elegans, GI71995724, Length=367, Percent_Identity=44.4141689373297, Blast_Score=322, Evalue=2e-88, Organism=Caenorhabditis elegans, GI17507121, Length=367, Percent_Identity=44.141689373297, Blast_Score=321, Evalue=5e-88, Organism=Caenorhabditis elegans, GI71987143, Length=367, Percent_Identity=41.41689373297, Blast_Score=312, Evalue=3e-85, Organism=Caenorhabditis elegans, GI17552114, Length=375, Percent_Identity=35.4666666666667, Blast_Score=264, Evalue=1e-70, Organism=Caenorhabditis elegans, GI17510307, Length=365, Percent_Identity=40, Blast_Score=250, Evalue=1e-66, Organism=Caenorhabditis elegans, GI17510309, Length=365, Percent_Identity=40, Blast_Score=250, Evalue=2e-66, Organism=Caenorhabditis elegans, GI71995514, Length=365, Percent_Identity=40, Blast_Score=249, Evalue=2e-66, Organism=Caenorhabditis elegans, GI17555296, Length=358, Percent_Identity=38.268156424581, Blast_Score=248, Evalue=7e-66, Organism=Caenorhabditis elegans, GI71995718, Length=366, Percent_Identity=40.4371584699454, Blast_Score=246, Evalue=2e-65, Organism=Caenorhabditis elegans, GI115533224, Length=344, Percent_Identity=40.406976744186, Blast_Score=246, Evalue=3e-65, Organism=Caenorhabditis elegans, GI32565321, Length=378, Percent_Identity=35.978835978836, Blast_Score=236, Evalue=2e-62, Organism=Caenorhabditis elegans, GI17507877, Length=371, Percent_Identity=39.0835579514825, Blast_Score=236, Evalue=2e-62, Organism=Caenorhabditis elegans, GI71982858, Length=346, Percent_Identity=35.2601156069364, Blast_Score=236, Evalue=3e-62, Organism=Caenorhabditis elegans, GI86570094, Length=352, Percent_Identity=37.5, Blast_Score=231, Evalue=7e-61, Organism=Caenorhabditis elegans, GI17537549, Length=351, Percent_Identity=37.6068376068376, Blast_Score=229, Evalue=3e-60, Organism=Caenorhabditis elegans, GI115532548, Length=366, Percent_Identity=35.2459016393443, Blast_Score=228, Evalue=6e-60, Organism=Caenorhabditis elegans, GI71999646, Length=382, Percent_Identity=32.7225130890052, Blast_Score=228, Evalue=7e-60, Organism=Caenorhabditis elegans, GI115532546, Length=366, Percent_Identity=35.2459016393443, Blast_Score=228, Evalue=7e-60, Organism=Caenorhabditis elegans, GI71999644, Length=382, Percent_Identity=32.7225130890052, Blast_Score=227, Evalue=1e-59, Organism=Caenorhabditis elegans, GI17507879, Length=371, Percent_Identity=38.0053908355795, Blast_Score=227, Evalue=1e-59, Organism=Caenorhabditis elegans, GI17507881, Length=371, Percent_Identity=37.7358490566038, Blast_Score=220, Evalue=2e-57, Organism=Caenorhabditis elegans, GI17536099, Length=390, Percent_Identity=34.3589743589744, Blast_Score=218, Evalue=9e-57, Organism=Caenorhabditis elegans, GI17536101, Length=391, Percent_Identity=34.2710997442455, Blast_Score=217, Evalue=1e-56, Organism=Caenorhabditis elegans, GI17536103, Length=391, Percent_Identity=34.2710997442455, Blast_Score=216, Evalue=3e-56, Organism=Caenorhabditis elegans, GI17510559, Length=443, Percent_Identity=30.0225733634311, Blast_Score=215, Evalue=6e-56, Organism=Caenorhabditis elegans, GI17552642, Length=382, Percent_Identity=32.9842931937173, Blast_Score=213, Evalue=2e-55, Organism=Caenorhabditis elegans, GI17507945, Length=370, Percent_Identity=34.0540540540541, Blast_Score=206, Evalue=2e-53, Organism=Caenorhabditis elegans, GI17509811, Length=356, Percent_Identity=34.5505617977528, Blast_Score=202, Evalue=4e-52, Organism=Caenorhabditis elegans, GI17553716, Length=363, Percent_Identity=31.6804407713499, Blast_Score=197, Evalue=2e-50, Organism=Caenorhabditis elegans, GI193206561, Length=342, Percent_Identity=31.2865497076023, Blast_Score=195, Evalue=5e-50, Organism=Caenorhabditis elegans, GI193208216, Length=376, Percent_Identity=32.7127659574468, Blast_Score=187, Evalue=2e-47, Organism=Caenorhabditis elegans, GI17505370, Length=438, Percent_Identity=31.5068493150685, Blast_Score=177, Evalue=1e-44, Organism=Caenorhabditis elegans, GI17556951, Length=423, Percent_Identity=29.5508274231678, Blast_Score=174, Evalue=2e-43, Organism=Caenorhabditis elegans, GI71990816, Length=351, Percent_Identity=32.4786324786325, Blast_Score=163, Evalue=2e-40, Organism=Caenorhabditis elegans, GI25148203, Length=403, Percent_Identity=27.2952853598015, Blast_Score=160, Evalue=2e-39, Organism=Caenorhabditis elegans, GI17507641, Length=390, Percent_Identity=28.7179487179487, Blast_Score=155, Evalue=4e-38, Organism=Caenorhabditis elegans, GI71982862, Length=203, Percent_Identity=37.4384236453202, Blast_Score=152, Evalue=6e-37, Organism=Caenorhabditis elegans, GI17508543, Length=377, Percent_Identity=27.5862068965517, Blast_Score=148, Evalue=6e-36, Organism=Caenorhabditis elegans, GI32564046, Length=381, Percent_Identity=28.3464566929134, Blast_Score=144, Evalue=9e-35, Organism=Caenorhabditis elegans, GI25148291, Length=424, Percent_Identity=25.9433962264151, Blast_Score=128, Evalue=7e-30, Organism=Caenorhabditis elegans, GI71997889, Length=373, Percent_Identity=26.0053619302949, Blast_Score=119, Evalue=4e-27, Organism=Caenorhabditis elegans, GI71987152, Length=98, Percent_Identity=51.0204081632653, Blast_Score=115, Evalue=7e-26, Organism=Caenorhabditis elegans, GI25148205, Length=330, Percent_Identity=25.7575757575758, Blast_Score=109, Evalue=4e-24, Organism=Caenorhabditis elegans, GI25145561, Length=353, Percent_Identity=24.6458923512748, Blast_Score=84, Evalue=2e-16, Organism=Caenorhabditis elegans, GI71987993, Length=361, Percent_Identity=21.8836565096953, Blast_Score=65, Evalue=7e-11, Organism=Caenorhabditis elegans, GI71987997, Length=361, Percent_Identity=21.8836565096953, Blast_Score=65, Evalue=8e-11, Organism=Saccharomyces cerevisiae, GI6322912, Length=367, Percent_Identity=46.0490463215259, Blast_Score=311, Evalue=2e-85, Organism=Saccharomyces cerevisiae, GI6322323, Length=367, Percent_Identity=46.0490463215259, Blast_Score=311, Evalue=2e-85, Organism=Saccharomyces cerevisiae, GI6320224, Length=372, Percent_Identity=41.9354838709677, Blast_Score=307, Evalue=4e-84, Organism=Saccharomyces cerevisiae, GI6320041, Length=365, Percent_Identity=38.3561643835616, Blast_Score=273, Evalue=6e-74, Organism=Saccharomyces cerevisiae, GI6324217, Length=352, Percent_Identity=40.3409090909091, Blast_Score=259, Evalue=9e-70, Organism=Saccharomyces cerevisiae, GI6324620, Length=367, Percent_Identity=38.4196185286104, Blast_Score=258, Evalue=2e-69, Organism=Saccharomyces cerevisiae, GI6324778, Length=363, Percent_Identity=38.8429752066116, Blast_Score=251, Evalue=2e-67, Organism=Saccharomyces cerevisiae, GI6321856, Length=369, Percent_Identity=38.2113821138211, Blast_Score=250, Evalue=4e-67, Organism=Saccharomyces cerevisiae, GI6325138, Length=364, Percent_Identity=38.4615384615385, Blast_Score=247, Evalue=4e-66, Organism=Saccharomyces cerevisiae, GI6321360, Length=358, Percent_Identity=38.5474860335196, Blast_Score=233, Evalue=5e-62, Organism=Saccharomyces cerevisiae, GI6320119, Length=351, Percent_Identity=33.9031339031339, Blast_Score=227, Evalue=3e-60, Organism=Saccharomyces cerevisiae, GI6323021, Length=352, Percent_Identity=34.6590909090909, Blast_Score=219, Evalue=7e-58, Organism=Saccharomyces cerevisiae, GI6320449, Length=383, Percent_Identity=34.7258485639687, Blast_Score=205, Evalue=1e-53, Organism=Saccharomyces cerevisiae, GI6321963, Length=368, Percent_Identity=33.9673913043478, Blast_Score=204, Evalue=3e-53, Organism=Saccharomyces cerevisiae, GI6320173, Length=430, Percent_Identity=29.5348837209302, Blast_Score=201, Evalue=2e-52, Organism=Saccharomyces cerevisiae, GI6323947, Length=372, Percent_Identity=34.6774193548387, Blast_Score=200, Evalue=6e-52, Organism=Saccharomyces cerevisiae, GI6322427, Length=361, Percent_Identity=32.409972299169, Blast_Score=200, Evalue=6e-52, Organism=Saccharomyces cerevisiae, GI6321111, Length=355, Percent_Identity=35.7746478873239, Blast_Score=191, Evalue=3e-49, Organism=Saccharomyces cerevisiae, GI6319714, Length=372, Percent_Identity=30.9139784946237, Blast_Score=184, Evalue=4e-47, Organism=Saccharomyces cerevisiae, GI6319618, Length=410, Percent_Identity=30.2439024390244, Blast_Score=181, Evalue=2e-46, Organism=Saccharomyces cerevisiae, GI6321267, Length=366, Percent_Identity=33.3333333333333, Blast_Score=163, Evalue=6e-41, Organism=Saccharomyces cerevisiae, GI6320400, Length=384, Percent_Identity=30.7291666666667, Blast_Score=154, Evalue=5e-38, Organism=Saccharomyces cerevisiae, GI6323306, Length=409, Percent_Identity=27.8728606356968, Blast_Score=154, Evalue=5e-38, Organism=Saccharomyces cerevisiae, GI6322876, Length=436, Percent_Identity=26.1467889908257, Blast_Score=118, Evalue=3e-27, Organism=Saccharomyces cerevisiae, GI6324366, Length=360, Percent_Identity=25.5555555555556, Blast_Score=114, Evalue=5e-26, Organism=Saccharomyces cerevisiae, GI6321374, Length=442, Percent_Identity=24.6606334841629, Blast_Score=91, Evalue=7e-19, Organism=Saccharomyces cerevisiae, GI6323844, Length=380, Percent_Identity=21.3157894736842, Blast_Score=78, Evalue=5e-15, Organism=Drosophila melanogaster, GI24645031, Length=371, Percent_Identity=42.3180592991914, Blast_Score=312, Evalue=4e-85, Organism=Drosophila melanogaster, GI24582080, Length=367, Percent_Identity=42.7792915531335, Blast_Score=294, Evalue=1e-79, Organism=Drosophila melanogaster, GI24582078, Length=367, Percent_Identity=42.7792915531335, Blast_Score=294, Evalue=1e-79, Organism=Drosophila melanogaster, GI17136248, Length=367, Percent_Identity=42.7792915531335, Blast_Score=294, Evalue=1e-79, Organism=Drosophila melanogaster, GI24582075, Length=367, Percent_Identity=42.7792915531335, Blast_Score=294, Evalue=1e-79, Organism=Drosophila melanogaster, GI24583279, Length=372, Percent_Identity=37.0967741935484, Blast_Score=266, Evalue=2e-71, Organism=Drosophila melanogaster, GI24583281, Length=372, Percent_Identity=37.0967741935484, Blast_Score=266, Evalue=4e-71, Organism=Drosophila melanogaster, GI24584399, Length=351, Percent_Identity=39.8860398860399, Blast_Score=254, Evalue=1e-67, Organism=Drosophila melanogaster, GI28574962, Length=366, Percent_Identity=36.6120218579235, Blast_Score=248, Evalue=1e-65, Organism=Drosophila melanogaster, GI281361218, Length=393, Percent_Identity=35.3689567430025, Blast_Score=245, Evalue=5e-65, Organism=Drosophila melanogaster, GI24644481, Length=393, Percent_Identity=35.3689567430025, Blast_Score=245, Evalue=5e-65, Organism=Drosophila melanogaster, GI24644487, Length=393, Percent_Identity=35.3689567430025, Blast_Score=245, Evalue=6e-65, Organism=Drosophila melanogaster, GI45551833, Length=393, Percent_Identity=35.3689567430025, Blast_Score=245, Evalue=6e-65, Organism=Drosophila melanogaster, GI24644485, Length=393, Percent_Identity=35.3689567430025, Blast_Score=245, Evalue=6e-65, Organism=Drosophila melanogaster, GI24644483, Length=393, Percent_Identity=35.3689567430025, Blast_Score=245, Evalue=6e-65, Organism=Drosophila melanogaster, GI24644479, Length=393, Percent_Identity=35.3689567430025, Blast_Score=245, Evalue=7e-65, Organism=Drosophila melanogaster, GI24642151, Length=364, Percent_Identity=38.7362637362637, Blast_Score=244, Evalue=1e-64, Organism=Drosophila melanogaster, GI18857967, Length=413, Percent_Identity=34.1404358353511, Blast_Score=242, Evalue=4e-64, Organism=Drosophila melanogaster, GI24585582, Length=358, Percent_Identity=35.7541899441341, Blast_Score=241, Evalue=1e-63, Organism=Drosophila melanogaster, GI24581954, Length=347, Percent_Identity=36.0230547550432, Blast_Score=238, Evalue=8e-63, Organism=Drosophila melanogaster, GI24581952, Length=347, Percent_Identity=36.0230547550432, Blast_Score=238, Evalue=8e-63, Organism=Drosophila melanogaster, GI24581956, Length=347, Percent_Identity=36.0230547550432, Blast_Score=238, Evalue=8e-63, Organism=Drosophila melanogaster, GI17985987, Length=372, Percent_Identity=38.9784946236559, Blast_Score=237, Evalue=1e-62, Organism=Drosophila melanogaster, GI24584994, Length=407, Percent_Identity=34.8894348894349, Blast_Score=233, Evalue=3e-61, Organism=Drosophila melanogaster, GI17977678, Length=356, Percent_Identity=37.6404494382022, Blast_Score=232, Evalue=5e-61, Organism=Drosophila melanogaster, GI21355075, Length=351, Percent_Identity=37.6068376068376, Blast_Score=231, Evalue=7e-61, Organism=Drosophila melanogaster, GI24662330, Length=356, Percent_Identity=36.2359550561798, Blast_Score=229, Evalue=4e-60, Organism=Drosophila melanogaster, GI21356161, Length=419, Percent_Identity=33.6515513126492, Blast_Score=226, Evalue=3e-59, Organism=Drosophila melanogaster, GI28575014, Length=409, Percent_Identity=33.2518337408313, Blast_Score=217, Evalue=2e-56, Organism=Drosophila melanogaster, GI17136814, Length=380, Percent_Identity=33.6842105263158, Blast_Score=207, Evalue=2e-53, Organism=Drosophila melanogaster, GI17647335, Length=364, Percent_Identity=31.043956043956, Blast_Score=201, Evalue=1e-51, Organism=Drosophila melanogaster, GI281365720, Length=315, Percent_Identity=34.9206349206349, Blast_Score=198, Evalue=8e-51, Organism=Drosophila melanogaster, GI28571808, Length=356, Percent_Identity=33.9887640449438, Blast_Score=189, Evalue=5e-48, Organism=Drosophila melanogaster, GI28571809, Length=356, Percent_Identity=33.9887640449438, Blast_Score=189, Evalue=5e-48, Organism=Drosophila melanogaster, GI21355559, Length=480, Percent_Identity=30.8333333333333, Blast_Score=189, Evalue=6e-48, Organism=Drosophila melanogaster, GI20130173, Length=443, Percent_Identity=29.5711060948081, Blast_Score=166, Evalue=5e-41, Organism=Drosophila melanogaster, GI24642822, Length=374, Percent_Identity=29.144385026738, Blast_Score=162, Evalue=4e-40, Organism=Drosophila melanogaster, GI24666101, Length=360, Percent_Identity=30.8333333333333, Blast_Score=159, Evalue=4e-39, Organism=Drosophila melanogaster, GI24643725, Length=387, Percent_Identity=29.7157622739018, Blast_Score=158, Evalue=1e-38, Organism=Drosophila melanogaster, GI24668515, Length=363, Percent_Identity=29.2011019283747, Blast_Score=144, Evalue=2e-34, Organism=Drosophila melanogaster, GI19920478, Length=417, Percent_Identity=28.2973621103118, Blast_Score=131, Evalue=1e-30, Organism=Drosophila melanogaster, GI17136666, Length=426, Percent_Identity=26.2910798122066, Blast_Score=129, Evalue=6e-30, Organism=Drosophila melanogaster, GI24640164, Length=402, Percent_Identity=25.1243781094527, Blast_Score=123, Evalue=4e-28, Organism=Drosophila melanogaster, GI18859659, Length=211, Percent_Identity=32.7014218009479, Blast_Score=116, Evalue=4e-26, Organism=Drosophila melanogaster, GI28571338, Length=211, Percent_Identity=32.7014218009479, Blast_Score=116, Evalue=4e-26, Organism=Drosophila melanogaster, GI24646066, Length=337, Percent_Identity=25.8160237388724, Blast_Score=86, Evalue=9e-17, Organism=Drosophila melanogaster, GI62472181, Length=333, Percent_Identity=22.8228228228228, Blast_Score=67, Evalue=3e-11, Organism=Drosophila melanogaster, GI24664230, Length=333, Percent_Identity=22.8228228228228, Blast_Score=67, Evalue=3e-11, Organism=Drosophila melanogaster, GI24664226, Length=320, Percent_Identity=22.8125, Blast_Score=67, Evalue=5e-11,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR014001 - InterPro: IPR011545 - InterPro: IPR001650 - InterPro: IPR014021 - InterPro: IPR000629 - InterPro: IPR014014 [H]
Pfam domain/function: PF00270 DEAD; PF00271 Helicase_C [H]
EC number: =3.6.4.13 [H]
Molecular weight: Translated: 64556; Mature: 64556
Theoretical pI: Translated: 8.37; Mature: 8.37
Prosite motif: PS00039 DEAD_ATP_HELICASE
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.5 %Cys (Translated Protein) 4.6 %Met (Translated Protein) 5.1 %Cys+Met (Translated Protein) 0.5 %Cys (Mature Protein) 4.6 %Met (Mature Protein) 5.1 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MKFDELNIDERILRAVEDMGFEETSPIQTQAIPAVLEGIDVIGQAQTGTGKTAAYSIPML CCCCCCCHHHHHHHHHHHCCCCCCCCCHHHHHHHHHHHHHHHCCCCCCCCCCEEEECCHH QKINPDVKKPQAIVLCPTRELAVQVAEEIRKLAKYMSDIKVLPVYGGQEIVRQIKSLKAG HHCCCCCCCCCEEEEECCHHHHHHHHHHHHHHHHHHHCCEEEEECCCHHHHHHHHHHHCC VQIIVGTPGRVMDHMRRKTVKFDSVSMVILDEADEMLDMGFREDMETILTETPEERQTVL CEEEECCCHHHHHHHHHHHCCCCCEEEEEECCHHHHHHCCHHHHHHHHHHCCCCHHHEEE FSATMPKPIMEIARKFQKDARIIKVVRKELTVSNIDQFYYEVRPKNKTEILSRLIDIYNP EECCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHEECCCCHHHHHHHHHHHHCC KLSVVFCNTKRQVDELISELKGRGYFADGIHGDMKQQQRDRVMDDFRSGKTEILIATDVA CEEEEEECCHHHHHHHHHHHCCCCEECCCCCCHHHHHHHHHHHHHHHCCCEEEEEEECHH ARGIDVDGVDIVFNYDLPQDEEYYVHRIGRTGRAGKSGLALSFISGREVYKLKDIERYCK HCCCCCCCEEEEEECCCCCCCHHHHHHCCCCCCCCCCCCEEEEECCCCHHHHHHHHHHHH TKILAKPIPSLDDVKNTKMDGIFDKIKEMIEADEHRAMLDMVEEHVNQEDYTSMDMAAAL HHHHHCCCCCCHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHH LKMIVGDTLDRIDEVENFHFDENADTSRMVRLFINVGKKDKITPANILGAIAGESGMPGR HHHHHHHHHHHHHHHHCCCCCCCCCHHHHHHHHHHCCCCCCCCHHHHHHHHCCCCCCCCH LVGAIDMMDNYTFVDVPAKHAEAVLAAMNDNVLIKGRKVNVEKANVSAKPARKSKSKPDT HEEHHHHHCCCEEEECCHHHHHHHHHHCCCCEEEECCEEEEEECCCCCCCCCCCCCCCCH RRKKDESRGKHDKLKERRSKGGKVRRNGEKY HHHHHHHCCHHHHHHHHHHCCCCCCCCCCCC >Mature Secondary Structure MKFDELNIDERILRAVEDMGFEETSPIQTQAIPAVLEGIDVIGQAQTGTGKTAAYSIPML CCCCCCCHHHHHHHHHHHCCCCCCCCCHHHHHHHHHHHHHHHCCCCCCCCCCEEEECCHH QKINPDVKKPQAIVLCPTRELAVQVAEEIRKLAKYMSDIKVLPVYGGQEIVRQIKSLKAG HHCCCCCCCCCEEEEECCHHHHHHHHHHHHHHHHHHHCCEEEEECCCHHHHHHHHHHHCC VQIIVGTPGRVMDHMRRKTVKFDSVSMVILDEADEMLDMGFREDMETILTETPEERQTVL CEEEECCCHHHHHHHHHHHCCCCCEEEEEECCHHHHHHCCHHHHHHHHHHCCCCHHHEEE FSATMPKPIMEIARKFQKDARIIKVVRKELTVSNIDQFYYEVRPKNKTEILSRLIDIYNP EECCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHEECCCCHHHHHHHHHHHHCC KLSVVFCNTKRQVDELISELKGRGYFADGIHGDMKQQQRDRVMDDFRSGKTEILIATDVA CEEEEEECCHHHHHHHHHHHCCCCEECCCCCCHHHHHHHHHHHHHHHCCCEEEEEEECHH ARGIDVDGVDIVFNYDLPQDEEYYVHRIGRTGRAGKSGLALSFISGREVYKLKDIERYCK HCCCCCCCEEEEEECCCCCCCHHHHHHCCCCCCCCCCCCEEEEECCCCHHHHHHHHHHHH TKILAKPIPSLDDVKNTKMDGIFDKIKEMIEADEHRAMLDMVEEHVNQEDYTSMDMAAAL HHHHHCCCCCCHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHH LKMIVGDTLDRIDEVENFHFDENADTSRMVRLFINVGKKDKITPANILGAIAGESGMPGR HHHHHHHHHHHHHHHHCCCCCCCCCHHHHHHHHHHCCCCCCCCHHHHHHHHCCCCCCCCH LVGAIDMMDNYTFVDVPAKHAEAVLAAMNDNVLIKGRKVNVEKANVSAKPARKSKSKPDT HEEHHHHHCCCEEEECCHHHHHHHHHHCCCCEEEECCEEEEEECCCCCCCCCCCCCCCCH RRKKDESRGKHDKLKERRSKGGKVRRNGEKY HHHHHHHCCHHHHHHHHHHCCCCCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: 12721630 [H]