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The map label for this gene is yqeN [H]

Identifier: 238917138

GI number: 238917138

Start: 1221389

End: 1222363

Strand: Reverse

Name: yqeN [H]

Synonym: EUBELI_01210

Alternate gene names: 238917138

Gene position: 1222363-1221389 (Counterclockwise)

Preceding gene: 238917139

Following gene: 238917136

Centisome position: 57.01

GC content: 35.69

Gene sequence:

>975_bases
TTGAAGGTCATAAGTGATGATATTAAAAAGGGCGAATTTAAGAGTGTATATCTTCTGTATGGAGAGGAAGAGTATCTTAA
GAAGCAGTACAGAGACAGATTAAAGAATGCTATAGCTGGTGATGATACTATGAATTATTCATATTATGATTCGGATAATG
CCAGCGTTAAGGATATAATTGATGTGTGTGAAACGCTGCCTTTTTTTGCCCAGAAGAGACTTGTTATAATGGAAAATACC
GGTTTTTTGAAAAGTTCTAATGACGAGCTTGCAGATTATATTAAACATATTCCTGATTATCTTGTTATTGTTATGGTAGA
AAAAGATGTGGACAAGCGTAATAAGGTATATAAGGCAGTTGATTCTGTGGGATATGTATGCGAGATGAAGCCACAGACAA
CTGCTACTCTTGAAAAATGGATAGCAGGGCTTCTTGCTAAGGATAATCTTAAAATAAGCAGGGAAGCCTGTGATTTGATA
CTTGATAAGACAGGTGCAGGCATGGATTATATAAGGCAGGAAATAGAGAAGCTTGTAAGTTATTGTCAGGGAAGGAATGT
TGTGACAGCAGAAGATGTAGAGAAAGTATGTGCAACACAGACAACAAGCCATATATTTGATATGATAAGTGCAATTGCGA
ATAAGAAACAACAGCAGGCACTTGATTTATATTATGATTTGTTGGAATTAAAAGAACCTCCTATGAGAATACTTTATCTT
ATAGTAAGACAGTTTAACGGAATATTACAGGTGAAGGATCTTATGTCAAGGGGTATTTCAGGTAAAGAGATTGCATCAAA
GATAGGAGCAGCACCATTTGTTGTCGGTAAATATCAGGCACAGGCAAAATATTTTGAGATGAATACACTGTTGGATGCAT
TGAATGAATGTGCGAAAACAGAAGAAGCAGTTAAGCAGGGAAGGCTTAATGACAGGCTGGGAGTAGAACTTATTATAATT
AAATACAGCAAATAA

Upstream 100 bases:

>100_bases
AATAGAAGATGCATAGCATGCTATGATAAAATATTTTCAACTTGAACCACTTGTACATATCTGATACTATTGTTTAAGAT
TAGAAACGGAGGCAGCAGGT

Downstream 100 bases:

>100_bases
AAAAGAACCCGGTGCGAGTGGGTGTCAGCACCGGGTTCTTTAAATTATTAAAATTCTTATTAAGCCATTGCGTTAACAGC
TTTAGTAATGTGAGATACTT

Product: DNA polymerase III subunit delta

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 324; Mature: 324

Protein sequence:

>324_residues
MKVISDDIKKGEFKSVYLLYGEEEYLKKQYRDRLKNAIAGDDTMNYSYYDSDNASVKDIIDVCETLPFFAQKRLVIMENT
GFLKSSNDELADYIKHIPDYLVIVMVEKDVDKRNKVYKAVDSVGYVCEMKPQTTATLEKWIAGLLAKDNLKISREACDLI
LDKTGAGMDYIRQEIEKLVSYCQGRNVVTAEDVEKVCATQTTSHIFDMISAIANKKQQQALDLYYDLLELKEPPMRILYL
IVRQFNGILQVKDLMSRGISGKEIASKIGAAPFVVGKYQAQAKYFEMNTLLDALNECAKTEEAVKQGRLNDRLGVELIII
KYSK

Sequences:

>Translated_324_residues
MKVISDDIKKGEFKSVYLLYGEEEYLKKQYRDRLKNAIAGDDTMNYSYYDSDNASVKDIIDVCETLPFFAQKRLVIMENT
GFLKSSNDELADYIKHIPDYLVIVMVEKDVDKRNKVYKAVDSVGYVCEMKPQTTATLEKWIAGLLAKDNLKISREACDLI
LDKTGAGMDYIRQEIEKLVSYCQGRNVVTAEDVEKVCATQTTSHIFDMISAIANKKQQQALDLYYDLLELKEPPMRILYL
IVRQFNGILQVKDLMSRGISGKEIASKIGAAPFVVGKYQAQAKYFEMNTLLDALNECAKTEEAVKQGRLNDRLGVELIII
KYSK
>Mature_324_residues
MKVISDDIKKGEFKSVYLLYGEEEYLKKQYRDRLKNAIAGDDTMNYSYYDSDNASVKDIIDVCETLPFFAQKRLVIMENT
GFLKSSNDELADYIKHIPDYLVIVMVEKDVDKRNKVYKAVDSVGYVCEMKPQTTATLEKWIAGLLAKDNLKISREACDLI
LDKTGAGMDYIRQEIEKLVSYCQGRNVVTAEDVEKVCATQTTSHIFDMISAIANKKQQQALDLYYDLLELKEPPMRILYL
IVRQFNGILQVKDLMSRGISGKEIASKIGAAPFVVGKYQAQAKYFEMNTLLDALNECAKTEEAVKQGRLNDRLGVELIII
KYSK

Specific function: Unknown

COG id: COG1466

COG function: function code L; DNA polymerase III, delta subunit

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR008921
- InterPro:   IPR010372
- InterPro:   IPR005790 [H]

Pfam domain/function: PF06144 DNA_pol3_delta [H]

EC number: NA

Molecular weight: Translated: 36897; Mature: 36897

Theoretical pI: Translated: 5.60; Mature: 5.60

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.9 %Cys     (Translated Protein)
3.1 %Met     (Translated Protein)
4.9 %Cys+Met (Translated Protein)
1.9 %Cys     (Mature Protein)
3.1 %Met     (Mature Protein)
4.9 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MKVISDDIKKGEFKSVYLLYGEEEYLKKQYRDRLKNAIAGDDTMNYSYYDSDNASVKDII
CCCCCCHHCCCCCCEEEEEECCHHHHHHHHHHHHHHHHCCCCCCCCEEECCCCCCHHHHH
DVCETLPFFAQKRLVIMENTGFLKSSNDELADYIKHIPDYLVIVMVEKDVDKRNKVYKAV
HHHHHCHHHHCCCEEEEECCCCCCCCCHHHHHHHHHCCHHEEEEEEECCCCHHHHHHHHH
DSVGYVCEMKPQTTATLEKWIAGLLAKDNLKISREACDLILDKTGAGMDYIRQEIEKLVS
HHCCCEEECCCCHHHHHHHHHHHHHHCCCCHHHHHHHHHHHCCCCCCHHHHHHHHHHHHH
YCQGRNVVTAEDVEKVCATQTTSHIFDMISAIANKKQQQALDLYYDLLELKEPPMRILYL
HHCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHH
IVRQFNGILQVKDLMSRGISGKEIASKIGAAPFVVGKYQAQAKYFEMNTLLDALNECAKT
HHHHHCCHHHHHHHHHCCCCHHHHHHHHCCCCEEEEHHHHHHHHHHHHHHHHHHHHHHHH
EEAVKQGRLNDRLGVELIIIKYSK
HHHHHHCCCCCCCCEEEEEEEECC
>Mature Secondary Structure
MKVISDDIKKGEFKSVYLLYGEEEYLKKQYRDRLKNAIAGDDTMNYSYYDSDNASVKDII
CCCCCCHHCCCCCCEEEEEECCHHHHHHHHHHHHHHHHCCCCCCCCEEECCCCCCHHHHH
DVCETLPFFAQKRLVIMENTGFLKSSNDELADYIKHIPDYLVIVMVEKDVDKRNKVYKAV
HHHHHCHHHHCCCEEEEECCCCCCCCCHHHHHHHHHCCHHEEEEEEECCCCHHHHHHHHH
DSVGYVCEMKPQTTATLEKWIAGLLAKDNLKISREACDLILDKTGAGMDYIRQEIEKLVS
HHCCCEEECCCCHHHHHHHHHHHHHHCCCCHHHHHHHHHHHCCCCCCHHHHHHHHHHHHH
YCQGRNVVTAEDVEKVCATQTTSHIFDMISAIANKKQQQALDLYYDLLELKEPPMRILYL
HHCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHH
IVRQFNGILQVKDLMSRGISGKEIASKIGAAPFVVGKYQAQAKYFEMNTLLDALNECAKT
HHHHHCCHHHHHHHHHCCCCHHHHHHHHCCCCEEEEHHHHHHHHHHHHHHHHHHHHHHHH
EEAVKQGRLNDRLGVELIIIKYSK
HHHHHHCCCCCCCCEEEEEEEECC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 8969508; 9384377 [H]