BacMap

Definition	Eubacterium eligens ATCC 27750 chromosome, complete genome.
Accession	NC_012778
Length	2,144,190

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The map label for this gene is yybJ [H]

Identifier: 238917071

GI number: 238917071

Start: 1154930

End: 1155583

Strand: Reverse

Name: yybJ [H]

Synonym: EUBELI_01141

Alternate gene names: 238917071

Gene position: 1155583-1154930 (Counterclockwise)

Preceding gene: 238917072

Following gene: 238917070

Centisome position: 53.89

GC content: 33.33

Gene sequence:

>654_bases
ATGTATATTGAGTTGAAAAATGTAACAAAGAAAATAAGAGGTGTAACAGTTCTTGACAATGTGAGTCTTCGTATGGAGTC
TGGAAATATATATGGCTTCAAAGGTAAAAATGGAAGTGGTAAGACTATGCTTATGAGAGCAGTTGCAGGACTTATAAGAG
TTGATGGAATTGTTGATATTAATGGGAAAATAATGGGTAAAGATATGATGTTTCCAGACAGTATAGGAATTCTTATAGAG
AACCCTGCATTTATTAACAATTATACAGGATTTGAGAATCTTAAAACTCTTGCATCTATAAGAGAAAGAATTGATGATGA
AAGAATAAGAGAGACTCTTAGTGAGGTCGGTCTTGAACCATATGATAAAAGAACTTTTCGTAAGTATTCGTTAGGTATGA
AACAGAGATTAGGCATAGCAGCAGCAATAATGGAAAATCCTGATATTATAATATTGGACGAGCCGATTAATGCTTTGGAT
GATTCAGGAACAGAGCAGGTAAGCAAGCTTCTTATGAAACATAAAGAACGGGGAGCACTTATTATTATTGCATGTCATGA
TGCAGAAGAACTTGATTATTTATCAGACGATATAATAGAAATTGCAGAGGGAAGAATCAAAAATAATAAAGCTGACAAAG
GAGGAACTAATTAA

Upstream 100 bases:

>100_bases
GTGGAACATTAGGAACTGCGTGTGATACAAATAGTATTAAAAATTATAGTGGGAATCTTATAGAGTTAAAAATTGAGGAT
AAAACAGAGAGGTGAATAAT

Downstream 100 bases:

>100_bases
ATGCATGAATTAAATGTGTTATTAAAGATAGAATTTAAAAGATTATTTAAAAATAAATTATTTTATATTTCATTATTTAT
AGGAGTTGTGCTTGCAACAG

Product: antibiotic transport system ATP-binding protein

Products: ADP; phosphate; S2O32- [Cytoplasm]; SO42- [Cytoplasm] [C]

Alternate protein names: NA

Number of amino acids: Translated: 217; Mature: 217

Protein sequence:

>217_residues
MYIELKNVTKKIRGVTVLDNVSLRMESGNIYGFKGKNGSGKTMLMRAVAGLIRVDGIVDINGKIMGKDMMFPDSIGILIE
NPAFINNYTGFENLKTLASIRERIDDERIRETLSEVGLEPYDKRTFRKYSLGMKQRLGIAAAIMENPDIIILDEPINALD
DSGTEQVSKLLMKHKERGALIIIACHDAEELDYLSDDIIEIAEGRIKNNKADKGGTN

Sequences:

>Translated_217_residues
MYIELKNVTKKIRGVTVLDNVSLRMESGNIYGFKGKNGSGKTMLMRAVAGLIRVDGIVDINGKIMGKDMMFPDSIGILIE
NPAFINNYTGFENLKTLASIRERIDDERIRETLSEVGLEPYDKRTFRKYSLGMKQRLGIAAAIMENPDIIILDEPINALD
DSGTEQVSKLLMKHKERGALIIIACHDAEELDYLSDDIIEIAEGRIKNNKADKGGTN
>Mature_217_residues
MYIELKNVTKKIRGVTVLDNVSLRMESGNIYGFKGKNGSGKTMLMRAVAGLIRVDGIVDINGKIMGKDMMFPDSIGILIE
NPAFINNYTGFENLKTLASIRERIDDERIRETLSEVGLEPYDKRTFRKYSLGMKQRLGIAAAIMENPDIIILDEPINALD
DSGTEQVSKLLMKHKERGALIIIACHDAEELDYLSDDIIEIAEGRIKNNKADKGGTN

Specific function: Part Of The Abc Transporter Complex Cysawtp Involved In Sulfate/Thiosulfate Import. Responsible For Energy Coupling To The Transport System. [C]

COG id: NA

COG function: NA

Gene ontology:

Cell location: Inner Membrane-Associated [C]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Contains 1 ABC transporter domain [H]

Homologues:

Organism=Homo sapiens, GI31657092, Length=213, Percent_Identity=28.169014084507, Blast_Score=86, Evalue=4e-17,
Organism=Homo sapiens, GI116734710, Length=209, Percent_Identity=28.2296650717703, Blast_Score=80, Evalue=1e-15,
Organism=Homo sapiens, GI27262624, Length=209, Percent_Identity=30.622009569378, Blast_Score=80, Evalue=2e-15,
Organism=Homo sapiens, GI27262626, Length=209, Percent_Identity=30.622009569378, Blast_Score=80, Evalue=2e-15,
Organism=Homo sapiens, GI27881501, Length=212, Percent_Identity=26.4150943396226, Blast_Score=79, Evalue=3e-15,
Organism=Homo sapiens, GI30795238, Length=212, Percent_Identity=26.4150943396226, Blast_Score=79, Evalue=3e-15,
Organism=Homo sapiens, GI11967969, Length=205, Percent_Identity=27.3170731707317, Blast_Score=78, Evalue=8e-15,
Organism=Homo sapiens, GI150417984, Length=211, Percent_Identity=27.9620853080569, Blast_Score=78, Evalue=8e-15,
Organism=Homo sapiens, GI105990541, Length=209, Percent_Identity=26.3157894736842, Blast_Score=77, Evalue=1e-14,
Organism=Homo sapiens, GI21536376, Length=213, Percent_Identity=26.7605633802817, Blast_Score=74, Evalue=1e-13,
Organism=Homo sapiens, GI153792144, Length=217, Percent_Identity=26.7281105990783, Blast_Score=71, Evalue=6e-13,
Organism=Homo sapiens, GI45446740, Length=195, Percent_Identity=28.7179487179487, Blast_Score=70, Evalue=2e-12,
Organism=Homo sapiens, GI47078218, Length=195, Percent_Identity=28.7179487179487, Blast_Score=70, Evalue=2e-12,
Organism=Homo sapiens, GI27477115, Length=209, Percent_Identity=26.3157894736842, Blast_Score=70, Evalue=2e-12,
Organism=Homo sapiens, GI27436953, Length=219, Percent_Identity=27.3972602739726, Blast_Score=68, Evalue=6e-12,
Organism=Homo sapiens, GI6005701, Length=195, Percent_Identity=26.1538461538462, Blast_Score=67, Evalue=1e-11,
Organism=Homo sapiens, GI46592956, Length=198, Percent_Identity=26.7676767676768, Blast_Score=64, Evalue=7e-11,
Organism=Homo sapiens, GI46592915, Length=198, Percent_Identity=26.7676767676768, Blast_Score=64, Evalue=7e-11,
Organism=Homo sapiens, GI46592898, Length=198, Percent_Identity=26.7676767676768, Blast_Score=64, Evalue=7e-11,
Organism=Homo sapiens, GI46592978, Length=198, Percent_Identity=26.7676767676768, Blast_Score=64, Evalue=7e-11,
Organism=Homo sapiens, GI46592964, Length=198, Percent_Identity=26.7676767676768, Blast_Score=64, Evalue=7e-11,
Organism=Escherichia coli, GI1788761, Length=220, Percent_Identity=29.0909090909091, Blast_Score=95, Evalue=3e-21,
Organism=Escherichia coli, GI1786563, Length=208, Percent_Identity=29.3269230769231, Blast_Score=91, Evalue=7e-20,
Organism=Escherichia coli, GI87081709, Length=211, Percent_Identity=28.9099526066351, Blast_Score=86, Evalue=1e-18,
Organism=Escherichia coli, GI1788225, Length=227, Percent_Identity=28.6343612334802, Blast_Score=85, Evalue=4e-18,
Organism=Escherichia coli, GI87081782, Length=201, Percent_Identity=26.865671641791, Blast_Score=85, Evalue=4e-18,
Organism=Escherichia coli, GI1787500, Length=199, Percent_Identity=33.1658291457286, Blast_Score=85, Evalue=4e-18,
Organism=Escherichia coli, GI1786398, Length=218, Percent_Identity=30.2752293577982, Blast_Score=83, Evalue=1e-17,
Organism=Escherichia coli, GI1787370, Length=217, Percent_Identity=28.110599078341, Blast_Score=82, Evalue=2e-17,
Organism=Escherichia coli, GI1787712, Length=211, Percent_Identity=27.0142180094787, Blast_Score=81, Evalue=6e-17,
Organism=Escherichia coli, GI1787105, Length=223, Percent_Identity=27.3542600896861, Blast_Score=80, Evalue=1e-16,
Organism=Escherichia coli, GI1790467, Length=214, Percent_Identity=27.5700934579439, Blast_Score=79, Evalue=2e-16,
Organism=Escherichia coli, GI1787029, Length=216, Percent_Identity=28.2407407407407, Blast_Score=79, Evalue=3e-16,
Organism=Escherichia coli, GI1786345, Length=211, Percent_Identity=28.9099526066351, Blast_Score=79, Evalue=3e-16,
Organism=Escherichia coli, GI48995001, Length=209, Percent_Identity=26.3157894736842, Blast_Score=77, Evalue=6e-16,
Organism=Escherichia coli, GI87081791, Length=194, Percent_Identity=27.8350515463918, Blast_Score=77, Evalue=7e-16,
Organism=Escherichia coli, GI48994943, Length=209, Percent_Identity=27.7511961722488, Blast_Score=76, Evalue=2e-15,
Organism=Escherichia coli, GI1787758, Length=211, Percent_Identity=27.0142180094787, Blast_Score=73, Evalue=1e-14,
Organism=Escherichia coli, GI1788506, Length=209, Percent_Identity=26.7942583732057, Blast_Score=72, Evalue=3e-14,
Organism=Escherichia coli, GI1789962, Length=219, Percent_Identity=29.6803652968037, Blast_Score=72, Evalue=3e-14,
Organism=Escherichia coli, GI1788450, Length=213, Percent_Identity=25.3521126760563, Blast_Score=72, Evalue=3e-14,
Organism=Escherichia coli, GI1789593, Length=209, Percent_Identity=25.8373205741627, Blast_Score=72, Evalue=4e-14,
Organism=Escherichia coli, GI1789873, Length=215, Percent_Identity=24.6511627906977, Blast_Score=71, Evalue=5e-14,
Organism=Escherichia coli, GI1789991, Length=215, Percent_Identity=27.4418604651163, Blast_Score=71, Evalue=5e-14,
Organism=Escherichia coli, GI1788472, Length=214, Percent_Identity=24.2990654205607, Blast_Score=71, Evalue=5e-14,
Organism=Escherichia coli, GI1786319, Length=223, Percent_Identity=28.2511210762332, Blast_Score=70, Evalue=8e-14,
Organism=Escherichia coli, GI87081834, Length=201, Percent_Identity=27.363184079602, Blast_Score=69, Evalue=2e-13,
Organism=Escherichia coli, GI1789032, Length=203, Percent_Identity=30.5418719211823, Blast_Score=69, Evalue=3e-13,
Organism=Escherichia coli, GI1788210, Length=219, Percent_Identity=26.4840182648402, Blast_Score=69, Evalue=3e-13,
Organism=Escherichia coli, GI1789963, Length=213, Percent_Identity=28.6384976525822, Blast_Score=68, Evalue=4e-13,
Organism=Escherichia coli, GI1786872, Length=217, Percent_Identity=28.5714285714286, Blast_Score=68, Evalue=5e-13,
Organism=Escherichia coli, GI1789890, Length=219, Percent_Identity=27.3972602739726, Blast_Score=67, Evalue=7e-13,
Organism=Escherichia coli, GI1790190, Length=218, Percent_Identity=24.7706422018349, Blast_Score=66, Evalue=2e-12,
Organism=Escherichia coli, GI1788165, Length=199, Percent_Identity=26.1306532663317, Blast_Score=65, Evalue=3e-12,
Organism=Escherichia coli, GI87082267, Length=205, Percent_Identity=29.2682926829268, Blast_Score=65, Evalue=5e-12,
Organism=Escherichia coli, GI1790162, Length=212, Percent_Identity=25, Blast_Score=64, Evalue=6e-12,
Organism=Escherichia coli, GI1790544, Length=227, Percent_Identity=22.0264317180617, Blast_Score=64, Evalue=9e-12,
Organism=Escherichia coli, GI1787547, Length=253, Percent_Identity=24.901185770751, Blast_Score=64, Evalue=1e-11,
Organism=Escherichia coli, GI1790525, Length=209, Percent_Identity=25.8373205741627, Blast_Score=64, Evalue=1e-11,
Organism=Escherichia coli, GI1789891, Length=208, Percent_Identity=28.3653846153846, Blast_Score=62, Evalue=2e-11,
Organism=Escherichia coli, GI1787792, Length=206, Percent_Identity=23.7864077669903, Blast_Score=62, Evalue=3e-11,
Organism=Escherichia coli, GI1787041, Length=208, Percent_Identity=27.4038461538462, Blast_Score=61, Evalue=5e-11,
Organism=Escherichia coli, GI48994883, Length=211, Percent_Identity=26.0663507109005, Blast_Score=61, Evalue=5e-11,
Organism=Escherichia coli, GI87082064, Length=174, Percent_Identity=25.8620689655172, Blast_Score=60, Evalue=8e-11,
Organism=Escherichia coli, GI1786698, Length=205, Percent_Identity=23.9024390243902, Blast_Score=60, Evalue=8e-11,
Organism=Caenorhabditis elegans, GI115533608, Length=190, Percent_Identity=32.1052631578947, Blast_Score=86, Evalue=1e-17,
Organism=Caenorhabditis elegans, GI17565586, Length=206, Percent_Identity=23.7864077669903, Blast_Score=72, Evalue=2e-13,
Organism=Caenorhabditis elegans, GI71983523, Length=214, Percent_Identity=26.6355140186916, Blast_Score=71, Evalue=4e-13,
Organism=Caenorhabditis elegans, GI71983516, Length=214, Percent_Identity=26.6355140186916, Blast_Score=71, Evalue=4e-13,
Organism=Caenorhabditis elegans, GI71983510, Length=214, Percent_Identity=26.6355140186916, Blast_Score=71, Evalue=4e-13,
Organism=Caenorhabditis elegans, GI17552010, Length=208, Percent_Identity=26.9230769230769, Blast_Score=65, Evalue=3e-11,
Organism=Saccharomyces cerevisiae, GI6325030, Length=203, Percent_Identity=30.0492610837438, Blast_Score=76, Evalue=3e-15,
Organism=Drosophila melanogaster, GI221500365, Length=211, Percent_Identity=27.0142180094787, Blast_Score=82, Evalue=4e-16,
Organism=Drosophila melanogaster, GI116007184, Length=211, Percent_Identity=27.0142180094787, Blast_Score=82, Evalue=4e-16,
Organism=Drosophila melanogaster, GI24666092, Length=210, Percent_Identity=24.7619047619048, Blast_Score=78, Evalue=5e-15,
Organism=Drosophila melanogaster, GI28574150, Length=203, Percent_Identity=28.5714285714286, Blast_Score=78, Evalue=5e-15,
Organism=Drosophila melanogaster, GI116007328, Length=203, Percent_Identity=28.5714285714286, Blast_Score=78, Evalue=5e-15,
Organism=Drosophila melanogaster, GI24643674, Length=225, Percent_Identity=26.6666666666667, Blast_Score=76, Evalue=1e-14,
Organism=Drosophila melanogaster, GI24582014, Length=181, Percent_Identity=30.3867403314917, Blast_Score=74, Evalue=7e-14,
Organism=Drosophila melanogaster, GI24582012, Length=181, Percent_Identity=30.3867403314917, Blast_Score=74, Evalue=7e-14,
Organism=Drosophila melanogaster, GI221512771, Length=211, Percent_Identity=24.6445497630332, Blast_Score=70, Evalue=1e-12,
Organism=Drosophila melanogaster, GI17647959, Length=211, Percent_Identity=27.4881516587678, Blast_Score=70, Evalue=1e-12,
Organism=Drosophila melanogaster, GI28574533, Length=185, Percent_Identity=28.6486486486486, Blast_Score=68, Evalue=4e-12,
Organism=Drosophila melanogaster, GI24648314, Length=209, Percent_Identity=24.8803827751196, Blast_Score=68, Evalue=5e-12,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR003439
- InterPro:   IPR017871
- InterPro:   IPR003593 [H]

Pfam domain/function: PF00005 ABC_tran [H]

EC number: 3.6.3.25 [C]

Molecular weight: Translated: 24194; Mature: 24194

Theoretical pI: Translated: 5.46; Mature: 5.46

Prosite motif: PS00211 ABC_TRANSPORTER_1 ; PS50893 ABC_TRANSPORTER_2

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.5 %Cys     (Translated Protein)
4.6 %Met     (Translated Protein)
5.1 %Cys+Met (Translated Protein)
0.5 %Cys     (Mature Protein)
4.6 %Met     (Mature Protein)
5.1 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MYIELKNVTKKIRGVTVLDNVSLRMESGNIYGFKGKNGSGKTMLMRAVAGLIRVDGIVDI
CEEEHHHHHHHHCCEEEEECCEEEEECCCEEEEECCCCCCHHHHHHHHHHHHHHCCEEEC
NGKIMGKDMMFPDSIGILIENPAFINNYTGFENLKTLASIRERIDDERIRETLSEVGLEP
CCEEEECCCCCCCCCCEEECCCEEECCCCCHHHHHHHHHHHHHCCHHHHHHHHHHCCCCC
YDKRTFRKYSLGMKQRLGIAAAIMENPDIIILDEPINALDDSGTEQVSKLLMKHKERGAL
CCHHHHHHHHCCHHHHHCCCEEEECCCCEEEECCCCCCCCCCCHHHHHHHHHHHCCCCCE
IIIACHDAEELDYLSDDIIEIAEGRIKNNKADKGGTN
EEEEECCCHHHHHHHHHHHHHHCCCCCCCCCCCCCCC
>Mature Secondary Structure
MYIELKNVTKKIRGVTVLDNVSLRMESGNIYGFKGKNGSGKTMLMRAVAGLIRVDGIVDI
CEEEHHHHHHHHCCEEEEECCEEEEECCCEEEEECCCCCCHHHHHHHHHHHHHHCCEEEC
NGKIMGKDMMFPDSIGILIENPAFINNYTGFENLKTLASIRERIDDERIRETLSEVGLEP
CCEEEECCCCCCCCCCEEECCCEEECCCCCHHHHHHHHHHHHHCCHHHHHHHHHHCCCCC
YDKRTFRKYSLGMKQRLGIAAAIMENPDIIILDEPINALDDSGTEQVSKLLMKHKERGAL
CCHHHHHHHHCCHHHHHCCCEEEECCCCEEEECCCCCCCCCCCHHHHHHHHHHHCCCCCE
IIIACHDAEELDYLSDDIIEIAEGRIKNNKADKGGTN
EEEEECCCHHHHHHHHHHHHHHCCCCCCCCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: S2O32- [Periplasm]; H2O; SO42- [Periplasm]; ATP [C]

Specific reaction: ATP + S2O32- [Periplasm] + H2O = ADP + phosphate + S2O32- [Cytoplasm] SO42- [Periplasm] + H2O + ATP = SO42- [Cytoplasm] + phosphate + ADP [C]

General reaction: NA

Inhibitor: NA

Structure determination priority: 7.0

TargetDB status: NA

Availability: NA

References: 1938973; 7584024; 9384377 [H]