Click here to switch to the map view.

The map label for this gene is yloA [H]

Identifier: 238917060

GI number: 238917060

Start: 1139825

End: 1141552

Strand: Direct

Name: yloA [H]

Synonym: EUBELI_01130

Alternate gene names: 238917060

Gene position: 1139825-1141552 (Clockwise)

Preceding gene: 238917055

Following gene: 238917065

Centisome position: 53.16

GC content: 38.77

Gene sequence:

>1728_bases
ATGGCATTCGATGGAATTACAATATCCAGTATTGTTAATGAATTAAACAACACAATTAACGGCGGAAGACTTTACAAGAT
ATCACAGCCTGAAGCCGATGAAATAATGCTTACAATAAAGACACAATCTGGTCAGTACAGACTTGTTTTATCTGCAAATG
CATCGCTTCCTCTTGCATATCTTACAGACGATAACAAGCCATCCCCTGCTACTGCACCGAATTTCTGCATGCTTCTTAGA
AAACATTTGAATAATGGAAGAATAATATCTATAACACAGCCAAAATTTGAGCGTGTAATTGATATTGAGGCAGAACATTT
AAATGAACTTGGCGACCTGTGCAGAAAGCACATAATCGCAGAATTCATGGGAAAGCACAGCAATATAATATTATGTGACG
ACAATAATACTATATTAGACAGTATCAAGCATATATCAGCACAGACAAGCTCAGTCAGGGAAGTTTTACCTGGTAGACCT
TATTTCATTCCTAATACTTCTGACAAGATTAATCCGCTTGAAGCTGACAGAAAGCATTTTGACGAAACAGTATTTTCAAA
GCCTGTACCTGTTGTCAAGGCGCTGCTTTCAAGCTATACAGGAATAAGCACATGTATAGCAGAAGAGCTTGCATACCGTG
CCGGAGTTGATGGCGGACACCCTGCCAACTGTCTTGATGAGCCTATGAAAGATGCATTATACAACGTATTTGACGCACTT
ATGTCCGATGTAAGAAATGGTATCTACCACCCCGATATGGTAACTGACAACGGTGTGCCTGCAGAATTTGCCGCTGTGAA
GCTTTCTATGTATGACAACCACACAGAATATGATTCTATAAGCAGATTGATTATCGATTATTACAGACAGAAAGAGATTG
CAACACGAATCCACCAGAAGTCTGTTGATATAAGAAGAATTGTAACAACACATCTTGAAAGAGCATACAAGAAGCTTGAC
ATTCAGGAAAAGCAGATAAAGGACACTGAAAAAAAAGACAAATACCGTATCTACGGCGAGCTTCTTACAACCTATGCTTA
CAGTATTCCTGCAGGTTCTAAGGAATATGAAGCACTTAATTACTACGATAATACTACAATTAAGATTCCGCTTGATAACA
CTCTCACACCAATTGAGAATGCCAACAAATATTTTGCAAGATATAACAAGCTTAAAAGAACCTATGAAGCCGGAATCCGT
CTTATTCAAGAGATTACTGAAGAAATAAGTTACCTTGAATCTATTATCAATGCAATTGAGATTTCAGTAACAGAGGCTGA
TCTTGCTAACATTAAGGAAGAGCTTATTGAAACTGGATATATTAAAAGGACTGTTAAAGGAAAGCACAAAATCACAGCCA
ACAAGCCGATGCATTTTGTATCAAGCGATGGATTTGACATATATGTTGGAAAGAATAACATACAGAATGACGAACTTACC
TTCAAGACAGGCAACGGCAATGACTGGTGGTTTCACGCCAAGCAGATGCCAGGCTCTCATGTACTTCTCAAAACAGATGG
AAAGGAAGTTCCTGACAGGACATTTGAAGAAGCAGCAAGCCTTGCCGCCTATTACTCTAAAGGCCGTGAGCAGGAAAAAG
TTGAAGTCGATTATGTATTAAAGAAGGAAGTTAAAAAGCCTGCCGGTGCCAAACCGGGATTCGTTGTGTATTACACCAAC
TACTCAATGGTTGCAGACACGGACATCAGCAAAATAAAACAGTTATAA

Upstream 100 bases:

>100_bases
GGAAAGTATACCAATTTTTGTGAAAGATAACAAGACTTACAGCAATAAGTATGTTAATATAATGCAATAAGATTAATGAA
TATTAATTAAAGGAGACATT

Downstream 100 bases:

>100_bases
AAAATTGGCTGAATCAGAATCTGAGGTGTCACCTCATCTGACTCAGCCATTATTTTTATTTATTCACTGGTTTTAATGCA
ATACTTACAACTGCCAGTAT

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 575; Mature: 574

Protein sequence:

>575_residues
MAFDGITISSIVNELNNTINGGRLYKISQPEADEIMLTIKTQSGQYRLVLSANASLPLAYLTDDNKPSPATAPNFCMLLR
KHLNNGRIISITQPKFERVIDIEAEHLNELGDLCRKHIIAEFMGKHSNIILCDDNNTILDSIKHISAQTSSVREVLPGRP
YFIPNTSDKINPLEADRKHFDETVFSKPVPVVKALLSSYTGISTCIAEELAYRAGVDGGHPANCLDEPMKDALYNVFDAL
MSDVRNGIYHPDMVTDNGVPAEFAAVKLSMYDNHTEYDSISRLIIDYYRQKEIATRIHQKSVDIRRIVTTHLERAYKKLD
IQEKQIKDTEKKDKYRIYGELLTTYAYSIPAGSKEYEALNYYDNTTIKIPLDNTLTPIENANKYFARYNKLKRTYEAGIR
LIQEITEEISYLESIINAIEISVTEADLANIKEELIETGYIKRTVKGKHKITANKPMHFVSSDGFDIYVGKNNIQNDELT
FKTGNGNDWWFHAKQMPGSHVLLKTDGKEVPDRTFEEAASLAAYYSKGREQEKVEVDYVLKKEVKKPAGAKPGFVVYYTN
YSMVADTDISKIKQL

Sequences:

>Translated_575_residues
MAFDGITISSIVNELNNTINGGRLYKISQPEADEIMLTIKTQSGQYRLVLSANASLPLAYLTDDNKPSPATAPNFCMLLR
KHLNNGRIISITQPKFERVIDIEAEHLNELGDLCRKHIIAEFMGKHSNIILCDDNNTILDSIKHISAQTSSVREVLPGRP
YFIPNTSDKINPLEADRKHFDETVFSKPVPVVKALLSSYTGISTCIAEELAYRAGVDGGHPANCLDEPMKDALYNVFDAL
MSDVRNGIYHPDMVTDNGVPAEFAAVKLSMYDNHTEYDSISRLIIDYYRQKEIATRIHQKSVDIRRIVTTHLERAYKKLD
IQEKQIKDTEKKDKYRIYGELLTTYAYSIPAGSKEYEALNYYDNTTIKIPLDNTLTPIENANKYFARYNKLKRTYEAGIR
LIQEITEEISYLESIINAIEISVTEADLANIKEELIETGYIKRTVKGKHKITANKPMHFVSSDGFDIYVGKNNIQNDELT
FKTGNGNDWWFHAKQMPGSHVLLKTDGKEVPDRTFEEAASLAAYYSKGREQEKVEVDYVLKKEVKKPAGAKPGFVVYYTN
YSMVADTDISKIKQL
>Mature_574_residues
AFDGITISSIVNELNNTINGGRLYKISQPEADEIMLTIKTQSGQYRLVLSANASLPLAYLTDDNKPSPATAPNFCMLLRK
HLNNGRIISITQPKFERVIDIEAEHLNELGDLCRKHIIAEFMGKHSNIILCDDNNTILDSIKHISAQTSSVREVLPGRPY
FIPNTSDKINPLEADRKHFDETVFSKPVPVVKALLSSYTGISTCIAEELAYRAGVDGGHPANCLDEPMKDALYNVFDALM
SDVRNGIYHPDMVTDNGVPAEFAAVKLSMYDNHTEYDSISRLIIDYYRQKEIATRIHQKSVDIRRIVTTHLERAYKKLDI
QEKQIKDTEKKDKYRIYGELLTTYAYSIPAGSKEYEALNYYDNTTIKIPLDNTLTPIENANKYFARYNKLKRTYEAGIRL
IQEITEEISYLESIINAIEISVTEADLANIKEELIETGYIKRTVKGKHKITANKPMHFVSSDGFDIYVGKNNIQNDELTF
KTGNGNDWWFHAKQMPGSHVLLKTDGKEVPDRTFEEAASLAAYYSKGREQEKVEVDYVLKKEVKKPAGAKPGFVVYYTNY
SMVADTDISKIKQL

Specific function: Unknown

COG id: COG1293

COG function: function code K; Predicted RNA-binding protein homologous to eukaryotic snRNP

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: Belongs to the SDCCAG1 family [H]

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR008532
- InterPro:   IPR008616 [H]

Pfam domain/function: PF05670 DUF814; PF05833 FbpA [H]

EC number: NA

Molecular weight: Translated: 65163; Mature: 65032

Theoretical pI: Translated: 6.47; Mature: 6.47

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.9 %Cys     (Translated Protein)
1.9 %Met     (Translated Protein)
2.8 %Cys+Met (Translated Protein)
0.9 %Cys     (Mature Protein)
1.7 %Met     (Mature Protein)
2.6 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MAFDGITISSIVNELNNTINGGRLYKISQPEADEIMLTIKTQSGQYRLVLSANASLPLAY
CCCCCEEHHHHHHHHHCCCCCCEEEEECCCCCCEEEEEEEECCCCEEEEEECCCCCEEEE
LTDDNKPSPATAPNFCMLLRKHLNNGRIISITQPKFERVIDIEAEHLNELGDLCRKHIIA
EECCCCCCCCCCHHHHHHHHHHCCCCEEEEECCHHHHHHEECCHHHHHHHHHHHHHHHHH
EFMGKHSNIILCDDNNTILDSIKHISAQTSSVREVLPGRPYFIPNTSDKINPLEADRKHF
HHHCCCCCEEEECCCCHHHHHHHHHHHHHHHHHHHCCCCCEECCCCCCCCCCCHHHHHHH
DETVFSKPVPVVKALLSSYTGISTCIAEELAYRAGVDGGHPANCLDEPMKDALYNVFDAL
HHHHHCCCHHHHHHHHHHCCCHHHHHHHHHHHHCCCCCCCCCHHHHHHHHHHHHHHHHHH
MSDVRNGIYHPDMVTDNGVPAEFAAVKLSMYDNHTEYDSISRLIIDYYRQKEIATRIHQK
HHHHHHCCCCCCCCCCCCCCCHHHEEEEEECCCCCCHHHHHHHHHHHHHHHHHHHHHHHH
SVDIRRIVTTHLERAYKKLDIQEKQIKDTEKKDKYRIYGELLTTYAYSIPAGSKEYEALN
CCHHHHHHHHHHHHHHHHCCCCHHHHHCCHHHHHHHHHHHHHHHHHHCCCCCCCCCCEEE
YYDNTTIKIPLDNTLTPIENANKYFARYNKLKRTYEAGIRLIQEITEEISYLESIINAIE
EECCCEEEEECCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHE
ISVTEADLANIKEELIETGYIKRTVKGKHKITANKPMHFVSSDGFDIYVGKNNIQNDELT
EEECHHHHHHHHHHHHHHHHHHHHHCCCEEEECCCCEEEECCCCCEEEECCCCCCCCCEE
FKTGNGNDWWFHAKQMPGSHVLLKTDGKEVPDRTFEEAASLAAYYSKGREQEKVEVDYVL
EEECCCCCEEEEEECCCCCEEEEECCCCCCCCHHHHHHHHHHHHHHCCCCCCCHHHHHHH
KKEVKKPAGAKPGFVVYYTNYSMVADTDISKIKQL
HHHHCCCCCCCCCEEEEEECCEEEECCCHHHHHCC
>Mature Secondary Structure 
AFDGITISSIVNELNNTINGGRLYKISQPEADEIMLTIKTQSGQYRLVLSANASLPLAY
CCCCEEHHHHHHHHHCCCCCCEEEEECCCCCCEEEEEEEECCCCEEEEEECCCCCEEEE
LTDDNKPSPATAPNFCMLLRKHLNNGRIISITQPKFERVIDIEAEHLNELGDLCRKHIIA
EECCCCCCCCCCHHHHHHHHHHCCCCEEEEECCHHHHHHEECCHHHHHHHHHHHHHHHHH
EFMGKHSNIILCDDNNTILDSIKHISAQTSSVREVLPGRPYFIPNTSDKINPLEADRKHF
HHHCCCCCEEEECCCCHHHHHHHHHHHHHHHHHHHCCCCCEECCCCCCCCCCCHHHHHHH
DETVFSKPVPVVKALLSSYTGISTCIAEELAYRAGVDGGHPANCLDEPMKDALYNVFDAL
HHHHHCCCHHHHHHHHHHCCCHHHHHHHHHHHHCCCCCCCCCHHHHHHHHHHHHHHHHHH
MSDVRNGIYHPDMVTDNGVPAEFAAVKLSMYDNHTEYDSISRLIIDYYRQKEIATRIHQK
HHHHHHCCCCCCCCCCCCCCCHHHEEEEEECCCCCCHHHHHHHHHHHHHHHHHHHHHHHH
SVDIRRIVTTHLERAYKKLDIQEKQIKDTEKKDKYRIYGELLTTYAYSIPAGSKEYEALN
CCHHHHHHHHHHHHHHHHCCCCHHHHHCCHHHHHHHHHHHHHHHHHHCCCCCCCCCCEEE
YYDNTTIKIPLDNTLTPIENANKYFARYNKLKRTYEAGIRLIQEITEEISYLESIINAIE
EECCCEEEEECCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHE
ISVTEADLANIKEELIETGYIKRTVKGKHKITANKPMHFVSSDGFDIYVGKNNIQNDELT
EEECHHHHHHHHHHHHHHHHHHHHHCCCEEEECCCCEEEECCCCCEEEECCCCCCCCCEE
FKTGNGNDWWFHAKQMPGSHVLLKTDGKEVPDRTFEEAASLAAYYSKGREQEKVEVDYVL
EEECCCCCEEEEEECCCCCEEEEECCCCCCCCHHHHHHHHHHHHHHCCCCCCCHHHHHHH
KKEVKKPAGAKPGFVVYYTNYSMVADTDISKIKQL
HHHHCCCCCCCCCEEEEEECCEEEECCCHHHHHCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: 9384377; 9534248 [H]