| Definition | Eubacterium eligens ATCC 27750 chromosome, complete genome. |
|---|---|
| Accession | NC_012778 |
| Length | 2,144,190 |
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The map label for this gene is 238917031
Identifier: 238917031
GI number: 238917031
Start: 1112141
End: 1113025
Strand: Direct
Name: 238917031
Synonym: EUBELI_01101
Alternate gene names: NA
Gene position: 1112141-1113025 (Clockwise)
Preceding gene: 238917030
Following gene: 238917034
Centisome position: 51.87
GC content: 35.93
Gene sequence:
>885_bases ATGGAGACAATAATAATGAATAAAGTATACAAAGTATTTCCGGGTGGCAAATTCAAGGTTCTTACTTTCAGTTATGATGA CGGAAAGCTTGAGGACAGACGGCTTGTAAAGCTTTTTAACAAATATAATCTTAAAGCAACATTTAATCTGGACACAGGCA TTATTGATCCTGCGATAAGAATTCCTCAGGAGGAATGGCCTGAGCTTTATAAAGGACATGATATTGCTGTTCATACATTT ACACATCCTACTATGATAAGACTAAATGATTATGCTGCTCTTAAAGAAATTCTTGAAGATAAGGTTAATCTTGAAAAAAT ATTTAACCGTCCGATATACGGTCTTGCCTATCCTAACGGTTCTTACGACAGCCGTATAGTTGATATTGCCAAATCTGTCG GCATTAAATATGCAAGAGTTACCAATGATAAATACGCTGCCACTAAAGCTGCAGAAGCCTATGCTGCTAATGCCGATGGT CCTATACTTATAGGGGATGAGAATGGTTTTTCTATGCCTGAAGACTATATGCGCTGGGTTCCAACCTGTCATCACAATCA TAATCTTATTGATTTTGGCAAGAAGTTCATGGCACTTACTAAAAAACAGTATCTTTACATGATGTATGTCTGGGGACACA GCTTTGAATTTGAAAGAAACAATAATTGGGAAATCATTGAGGAATTCTGTGAAATGATTGCTAACCGTGATGATATCTGG TATGCAACCAATTCTGATATTGTTGAATACAACGAATTGTTTGACAGACTTGAGTTCTTTGCTGATAACGAATATGTTCA TAACCCTTCTGTTAAGTCAGTATGGCTTGCAGTAAATAATAGTACTATTGTTGAAGTAAAAGGCGGCGAAACAGTTAAAT TATAA
Upstream 100 bases:
>100_bases CGATAGCAGCGCAAATTTGGGGATTATTTTACGAAAACACATGACACGGTTATAATTGTGTTATATAATTAAAAAGTCGG TTTTAACTGGCTAATAATAT
Downstream 100 bases:
>100_bases TAACGCATTATTAAAGGCGGCTTACCATTACAGGTTTGCCGCCCTCTTTTTATTCATGCTTAAGATTCTTAAATGCATTT CTTAATGTAATTGGATTGCC
Product: hypothetical protein
Products: NA
Alternate protein names: Xylanase/Chitin Deacetylase; Polysaccharide Deacetylase Est4D
Number of amino acids: Translated: 294; Mature: 294
Protein sequence:
>294_residues METIIMNKVYKVFPGGKFKVLTFSYDDGKLEDRRLVKLFNKYNLKATFNLDTGIIDPAIRIPQEEWPELYKGHDIAVHTF THPTMIRLNDYAALKEILEDKVNLEKIFNRPIYGLAYPNGSYDSRIVDIAKSVGIKYARVTNDKYAATKAAEAYAANADG PILIGDENGFSMPEDYMRWVPTCHHNHNLIDFGKKFMALTKKQYLYMMYVWGHSFEFERNNNWEIIEEFCEMIANRDDIW YATNSDIVEYNELFDRLEFFADNEYVHNPSVKSVWLAVNNSTIVEVKGGETVKL
Sequences:
>Translated_294_residues METIIMNKVYKVFPGGKFKVLTFSYDDGKLEDRRLVKLFNKYNLKATFNLDTGIIDPAIRIPQEEWPELYKGHDIAVHTF THPTMIRLNDYAALKEILEDKVNLEKIFNRPIYGLAYPNGSYDSRIVDIAKSVGIKYARVTNDKYAATKAAEAYAANADG PILIGDENGFSMPEDYMRWVPTCHHNHNLIDFGKKFMALTKKQYLYMMYVWGHSFEFERNNNWEIIEEFCEMIANRDDIW YATNSDIVEYNELFDRLEFFADNEYVHNPSVKSVWLAVNNSTIVEVKGGETVKL >Mature_294_residues METIIMNKVYKVFPGGKFKVLTFSYDDGKLEDRRLVKLFNKYNLKATFNLDTGIIDPAIRIPQEEWPELYKGHDIAVHTF THPTMIRLNDYAALKEILEDKVNLEKIFNRPIYGLAYPNGSYDSRIVDIAKSVGIKYARVTNDKYAATKAAEAYAANADG PILIGDENGFSMPEDYMRWVPTCHHNHNLIDFGKKFMALTKKQYLYMMYVWGHSFEFERNNNWEIIEEFCEMIANRDDIW YATNSDIVEYNELFDRLEFFADNEYVHNPSVKSVWLAVNNSTIVEVKGGETVKL
Specific function: Unknown
COG id: COG0726
COG function: function code G; Predicted xylanase/chitin deacetylase
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 34182; Mature: 34182
Theoretical pI: Translated: 5.43; Mature: 5.43
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.7 %Cys (Translated Protein) 3.1 %Met (Translated Protein) 3.7 %Cys+Met (Translated Protein) 0.7 %Cys (Mature Protein) 3.1 %Met (Mature Protein) 3.7 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure METIIMNKVYKVFPGGKFKVLTFSYDDGKLEDRRLVKLFNKYNLKATFNLDTGIIDPAIR CCEEHHHHHHHHCCCCEEEEEEEECCCCCCCHHHHHHHHHHCCCEEEEECCCCCCCCHHC IPQEEWPELYKGHDIAVHTFTHPTMIRLNDYAALKEILEDKVNLEKIFNRPIYGLAYPNG CCCHHHHHHHCCCEEEEEEECCCEEEEECCHHHHHHHHHHHCCHHHHHCCCEEEEECCCC SYDSRIVDIAKSVGIKYARVTNDKYAATKAAEAYAANADGPILIGDENGFSMPEDYMRWV CCCHHHHHHHHHHCEEEEEECCCCHHHHHHHHHHCCCCCCCEEEECCCCCCCCHHHHHHC PTCHHNHNLIDFGKKFMALTKKQYLYMMYVWGHSFEFERNNNWEIIEEFCEMIANRDDIW CCCCCCCCHHHHHHHHHHHHHCCEEEEEEEECCEEEECCCCCHHHHHHHHHHHCCCCCEE YATNSDIVEYNELFDRLEFFADNEYVHNPSVKSVWLAVNNSTIVEVKGGETVKL EECCCCCCHHHHHHHHHHHHCCCCEEECCCCEEEEEEECCCEEEEECCCCEECC >Mature Secondary Structure METIIMNKVYKVFPGGKFKVLTFSYDDGKLEDRRLVKLFNKYNLKATFNLDTGIIDPAIR CCEEHHHHHHHHCCCCEEEEEEEECCCCCCCHHHHHHHHHHCCCEEEEECCCCCCCCHHC IPQEEWPELYKGHDIAVHTFTHPTMIRLNDYAALKEILEDKVNLEKIFNRPIYGLAYPNG CCCHHHHHHHCCCEEEEEEECCCEEEEECCHHHHHHHHHHHCCHHHHHCCCEEEEECCCC SYDSRIVDIAKSVGIKYARVTNDKYAATKAAEAYAANADGPILIGDENGFSMPEDYMRWV CCCHHHHHHHHHHCEEEEEECCCCHHHHHHHHHHCCCCCCCEEEECCCCCCCCHHHHHHC PTCHHNHNLIDFGKKFMALTKKQYLYMMYVWGHSFEFERNNNWEIIEEFCEMIANRDDIW CCCCCCCCHHHHHHHHHHHHHCCEEEEEEEECCEEEECCCCCHHHHHHHHHHHCCCCCEE YATNSDIVEYNELFDRLEFFADNEYVHNPSVKSVWLAVNNSTIVEVKGGETVKL EECCCCCCHHHHHHHHHHHHCCCCEEECCCCEEEEEEECCCEEEEECCCCEECC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA