| Definition | Eubacterium eligens ATCC 27750 chromosome, complete genome. |
|---|---|
| Accession | NC_012778 |
| Length | 2,144,190 |
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The map label for this gene is 238917028
Identifier: 238917028
GI number: 238917028
Start: 1107244
End: 1109949
Strand: Reverse
Name: 238917028
Synonym: EUBELI_01098
Alternate gene names: NA
Gene position: 1109949-1107244 (Counterclockwise)
Preceding gene: 238917029
Following gene: 238917027
Centisome position: 51.77
GC content: 35.51
Gene sequence:
>2706_bases ATGGGAAAATCAGTGTGGAAAGATCTCTTTCGTGAGATTAAGAGAACATTTGGAAGATTTATAGCTATATTTGCAATTGT TGCTATTGGAGTAGCATTTTTTGCAGGAGTAACAGCATCTTCTAATGATATGAAGAATTCAACGGATAACTATTATGATG ATTATAATATGAGTGATTTAAGACTTTTATCATCAATAGGTTTTAATGAAGATGATATTAAAGCTATAAGAGCAGTTGAT GGTGTTAAGGGAGTGTATCCTGCATATTCACAGGATGCAGTTATCAGGAAAGACAGCATAGAGACCGCTGTACATATAAT GTCAGTACCTGATAATACAGACAGGAATAATGAGAATTACATTAACCAGTTACGAATCAAGGAAGGACGGCTTCCTGAAA ATAGCGGTGAATGTGTTGTAAGATATGAAGATACCAAGGATAATTTTTCTATAGGAGATACAATCAAGCTTTCATCCGGA ACACAGGATGATATTAATGACAGTCTTAAAGATTCAGAGTATACGGTTGTAGGAACAGTATATACACCATATTATGTTTC TTATGACCTTGGAACTACTAATGTTGGAAGCGGCAGGATTAATTATCTTATGTATATTACGGAAGATGAATTCATGTCCG ATTATTTCAATGAAGTATTTGCGACAGTTGATGGAGCAAAGGAATTGGATACATATGGAACTGAATATAAAGATCTCGTT AAAGAAACGGCTGACAGAATAGATAATATTTCACAGAGCAGAATTAATGTAAGAAAAGATGACATACAGGATGTATATGA AGATTCAGTAAATGAGGCAAAAGAGGCTGCCAAAGCGGCTATATACGACCATGTTGTAGAATCACTTACAGAACAGTACA GTAATTATTTTGTAGGAATGGATGTTTCAGCTATTATTGAGCCATATATCCAGCCGGCATATGAGAAAGCACTTGCTGAT TATGATTTTAGCAGCATTGAGACGCAGGCTAAGGAAGATTTTGAATCTAAATATGGTGACAGCGATGACTGGAAATGGTA TGAGCTTACAAGACAGGAACAGTATTCTTTTAAAGATTATGAATCCAGTGCAGACAGGATGAAAGCCATTGCCACGGTAT TTCCAATATTCTTTATAGTTGTATCTGCCCTTGTCTGTCTTACAACAATGACAAGAATGGTAGCAGAAGAAAGGGGACTT ATAGGAACATATAAAGCACTAGGATACAGCAAAAAGGTGATTGCATTCAAATATATAGCATATGCATTAATTGCTTCGGT TACTGGAGGAATAGCAGGCTGTATCATAGGTCTTAAACTGTTTCCGCTTGTAATATATAATTCTTGGAATATAATATACC AGCTTCCGCCAATAGTGTACGACAGCCACATATTTCTTTCAATTATAGCCATTACAACCATGGTTTTAGTAACAGTTATA GCAGCTCTTTTTTCATGCTACAGTGAGTTAGAAGAGGTTCCATCAGAGCTTATGCGTCCGAAAGCACCTAAGAGCGGTAA GAAAATCCTTCTTGAGCATATTACATTTATATGGAAACACATGTCATTCACAATGAAGGTTACTATGCGTAATCTGTTCC TGTATAAGAAGAGATTTCTTATGACTGTTGTAGGGATTGCAGGCTGTACGGCACTTATGACAGCAGGCTTTGGTATTAAG AACAGTATAGAATGTCTTATTCATAACCAGTACGGTGAACTTATACATTATGACAGTGTTGCCACATTTACAGATGGGAT TACACAGGAGGATATGGATACACTTGAAAGTGACATGTCAGCGGACGTACACATTGATGATTTTCTACTAAACTGTGGTT ATTCTGATGATGTTAAGAGCAGTGAAGATACACAGACAGCAGAATATGTCATAGTTGATGATAAGAATGCATTTAAAGAT TATGTGACATTAAGAACTAGAAGAAAACATAATGATGTGGCTCTTGGGGATTCAGGCGTTGTTATCACTGAAAAGCTATC TAAAGATTTAGGGGTAAAGAAAGGTGATAAGATTACAGTAACATCATCCGCTGGAAAGCAGACAGAGGCTGTTGTATCAG GTATTACAGAAATGTATGTTAATCATTATGTATATATAAGTACAGAATATTATAATGAACTTTTTGGAAATGTTCCTGAT AACAACAGGGTGCTTATAAAGATTAACGGAGATGTAAGCGAAACTGAAAGTTATATGGGCGATGAATATCTTACAAGAGA TTATATTAAGGGTGTGAGTTTCCTTAATGCTAATGTTACACGATTTGAAAATATGATACAGTCACTTGACCTGGTAACAT GGGTACTTATAATATCAGCGGGGCTGCTTGCATTCGTTGTGTTATATAATCTTACAAATGTTAATATATCAGAGAGAAGA AGAGAAATTGCAACTATTAAGGTACTTGGTTTCTTTGACCCGGAGGTAGGCATGTATGTGTACCGTGAGAATATATTCCT TACATTAATCGGTGGTGTGTTCGGACTATTATTAGGAAGACTTCTTCACATATACATAATGCTTACTGTTGAGATGGATG CAATAATGTTTGGATATGCTATTAAACCGACAACATATATATATTCATATCTTATCACACTGATTTTCTCAGTTGTAGTT AATCTGGCCATGTATGGAAAGTTAAAGAAGCTTCCTATGGTCGAATCTTTAAAGTCAGTAGAATAA
Upstream 100 bases:
>100_bases TATTAAGATAAAGAATGGTATCGTTGACAGTGTTGTTATTAATGACAATCCTGTTTCAGTAGACGAGATAGACTGGTAAT ACTATGGAGGCTTGTACAAT
Downstream 100 bases:
>100_bases AACGGACAGCCCTTTCATATATTGTGAAAAACAATAGTGAAGGGGCTTTTTTTGTATGACGAATCACTCTATAAAATTCT TCCGGATGAATTAATTAAAG
Product: hypothetical protein
Products: NA
Alternate protein names: Permease; ABC Transporter Permease; Peptide ABC Transporter Permease; ABC Transporter; Efflux ABC Transporter Permease Protein; Permease Domain Protein; Antimicrobial Peptide ABC Transporter Permease; ABC Transporter Inner Membrane Subunit; Efflux ABC Transporter Permease; ABC-Type Antimicrobial Peptide Transport System Protein; ABC-Type Transporter; Large Transmembrane Protein Possibly Involved In Transport; ABC-Type Transport System Permease; ABC-Type Transport System
Number of amino acids: Translated: 901; Mature: 900
Protein sequence:
>901_residues MGKSVWKDLFREIKRTFGRFIAIFAIVAIGVAFFAGVTASSNDMKNSTDNYYDDYNMSDLRLLSSIGFNEDDIKAIRAVD GVKGVYPAYSQDAVIRKDSIETAVHIMSVPDNTDRNNENYINQLRIKEGRLPENSGECVVRYEDTKDNFSIGDTIKLSSG TQDDINDSLKDSEYTVVGTVYTPYYVSYDLGTTNVGSGRINYLMYITEDEFMSDYFNEVFATVDGAKELDTYGTEYKDLV KETADRIDNISQSRINVRKDDIQDVYEDSVNEAKEAAKAAIYDHVVESLTEQYSNYFVGMDVSAIIEPYIQPAYEKALAD YDFSSIETQAKEDFESKYGDSDDWKWYELTRQEQYSFKDYESSADRMKAIATVFPIFFIVVSALVCLTTMTRMVAEERGL IGTYKALGYSKKVIAFKYIAYALIASVTGGIAGCIIGLKLFPLVIYNSWNIIYQLPPIVYDSHIFLSIIAITTMVLVTVI AALFSCYSELEEVPSELMRPKAPKSGKKILLEHITFIWKHMSFTMKVTMRNLFLYKKRFLMTVVGIAGCTALMTAGFGIK NSIECLIHNQYGELIHYDSVATFTDGITQEDMDTLESDMSADVHIDDFLLNCGYSDDVKSSEDTQTAEYVIVDDKNAFKD YVTLRTRRKHNDVALGDSGVVITEKLSKDLGVKKGDKITVTSSAGKQTEAVVSGITEMYVNHYVYISTEYYNELFGNVPD NNRVLIKINGDVSETESYMGDEYLTRDYIKGVSFLNANVTRFENMIQSLDLVTWVLIISAGLLAFVVLYNLTNVNISERR REIATIKVLGFFDPEVGMYVYRENIFLTLIGGVFGLLLGRLLHIYIMLTVEMDAIMFGYAIKPTTYIYSYLITLIFSVVV NLAMYGKLKKLPMVESLKSVE
Sequences:
>Translated_901_residues MGKSVWKDLFREIKRTFGRFIAIFAIVAIGVAFFAGVTASSNDMKNSTDNYYDDYNMSDLRLLSSIGFNEDDIKAIRAVD GVKGVYPAYSQDAVIRKDSIETAVHIMSVPDNTDRNNENYINQLRIKEGRLPENSGECVVRYEDTKDNFSIGDTIKLSSG TQDDINDSLKDSEYTVVGTVYTPYYVSYDLGTTNVGSGRINYLMYITEDEFMSDYFNEVFATVDGAKELDTYGTEYKDLV KETADRIDNISQSRINVRKDDIQDVYEDSVNEAKEAAKAAIYDHVVESLTEQYSNYFVGMDVSAIIEPYIQPAYEKALAD YDFSSIETQAKEDFESKYGDSDDWKWYELTRQEQYSFKDYESSADRMKAIATVFPIFFIVVSALVCLTTMTRMVAEERGL IGTYKALGYSKKVIAFKYIAYALIASVTGGIAGCIIGLKLFPLVIYNSWNIIYQLPPIVYDSHIFLSIIAITTMVLVTVI AALFSCYSELEEVPSELMRPKAPKSGKKILLEHITFIWKHMSFTMKVTMRNLFLYKKRFLMTVVGIAGCTALMTAGFGIK NSIECLIHNQYGELIHYDSVATFTDGITQEDMDTLESDMSADVHIDDFLLNCGYSDDVKSSEDTQTAEYVIVDDKNAFKD YVTLRTRRKHNDVALGDSGVVITEKLSKDLGVKKGDKITVTSSAGKQTEAVVSGITEMYVNHYVYISTEYYNELFGNVPD NNRVLIKINGDVSETESYMGDEYLTRDYIKGVSFLNANVTRFENMIQSLDLVTWVLIISAGLLAFVVLYNLTNVNISERR REIATIKVLGFFDPEVGMYVYRENIFLTLIGGVFGLLLGRLLHIYIMLTVEMDAIMFGYAIKPTTYIYSYLITLIFSVVV NLAMYGKLKKLPMVESLKSVE >Mature_900_residues GKSVWKDLFREIKRTFGRFIAIFAIVAIGVAFFAGVTASSNDMKNSTDNYYDDYNMSDLRLLSSIGFNEDDIKAIRAVDG VKGVYPAYSQDAVIRKDSIETAVHIMSVPDNTDRNNENYINQLRIKEGRLPENSGECVVRYEDTKDNFSIGDTIKLSSGT QDDINDSLKDSEYTVVGTVYTPYYVSYDLGTTNVGSGRINYLMYITEDEFMSDYFNEVFATVDGAKELDTYGTEYKDLVK ETADRIDNISQSRINVRKDDIQDVYEDSVNEAKEAAKAAIYDHVVESLTEQYSNYFVGMDVSAIIEPYIQPAYEKALADY DFSSIETQAKEDFESKYGDSDDWKWYELTRQEQYSFKDYESSADRMKAIATVFPIFFIVVSALVCLTTMTRMVAEERGLI GTYKALGYSKKVIAFKYIAYALIASVTGGIAGCIIGLKLFPLVIYNSWNIIYQLPPIVYDSHIFLSIIAITTMVLVTVIA ALFSCYSELEEVPSELMRPKAPKSGKKILLEHITFIWKHMSFTMKVTMRNLFLYKKRFLMTVVGIAGCTALMTAGFGIKN SIECLIHNQYGELIHYDSVATFTDGITQEDMDTLESDMSADVHIDDFLLNCGYSDDVKSSEDTQTAEYVIVDDKNAFKDY VTLRTRRKHNDVALGDSGVVITEKLSKDLGVKKGDKITVTSSAGKQTEAVVSGITEMYVNHYVYISTEYYNELFGNVPDN NRVLIKINGDVSETESYMGDEYLTRDYIKGVSFLNANVTRFENMIQSLDLVTWVLIISAGLLAFVVLYNLTNVNISERRR EIATIKVLGFFDPEVGMYVYRENIFLTLIGGVFGLLLGRLLHIYIMLTVEMDAIMFGYAIKPTTYIYSYLITLIFSVVVN LAMYGKLKKLPMVESLKSVE
Specific function: Unknown
COG id: COG0577
COG function: function code V; ABC-type antimicrobial peptide transport system, permease component
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 101793; Mature: 101662
Theoretical pI: Translated: 4.56; Mature: 4.56
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.8 %Cys (Translated Protein) 3.1 %Met (Translated Protein) 3.9 %Cys+Met (Translated Protein) 0.8 %Cys (Mature Protein) 3.0 %Met (Mature Protein) 3.8 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MGKSVWKDLFREIKRTFGRFIAIFAIVAIGVAFFAGVTASSNDMKNSTDNYYDDYNMSDL CCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCHHH RLLSSIGFNEDDIKAIRAVDGVKGVYPAYSQDAVIRKDSIETAVHIMSVPDNTDRNNENY HHHHHCCCCHHHHHHHHHHHCCCCCCCCCCCCCEEECCCHHHEEEEEECCCCCCCCCHHH INQLRIKEGRLPENSGECVVRYEDTKDNFSIGDTIKLSSGTQDDINDSLKDSEYTVVGTV HHHHEEECCCCCCCCCCEEEEEECCCCCCCCCCEEEECCCCCHHHCCCCCCCCEEEEEEE YTPYYVSYDLGTTNVGSGRINYLMYITEDEFMSDYFNEVFATVDGAKELDTYGTEYKDLV ECCEEEEEECCCCCCCCCCEEEEEEEECHHHHHHHHHHHHHHCCCHHHHHHCCCHHHHHH KETADRIDNISQSRINVRKDDIQDVYEDSVNEAKEAAKAAIYDHVVESLTEQYSNYFVGM HHHHHHHHCCHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCEEECC DVSAIIEPYIQPAYEKALADYDFSSIETQAKEDFESKYGDSDDWKWYELTRQEQYSFKDY CHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHCCCCCCCCHHHHHHHHCCCCHHH ESSADRMKAIATVFPIFFIVVSALVCLTTMTRMVAEERGLIGTYKALGYSKKVIAFKYIA HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCEEHHHHHCCCCHHHHHHHHH YALIASVTGGIAGCIIGLKLFPLVIYNSWNIIYQLPPIVYDSHIFLSIIAITTMVLVTVI HHHHHHHHHHHHHHHHHHHHHHHHHCCCCCEEEECCCCEECCHHHHHHHHHHHHHHHHHH AALFSCYSELEEVPSELMRPKAPKSGKKILLEHITFIWKHMSFTMKVTMRNLFLYKKRFL HHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH MTVVGIAGCTALMTAGFGIKNSIECLIHNQYGELIHYDSVATFTDGITQEDMDTLESDMS HHHHHHHHHHHHHHCCCCCCCCHHEEEECCCCCEEEECCHHHHHCCCCHHHHHHHHHHCC ADVHIDDFLLNCGYSDDVKSSEDTQTAEYVIVDDKNAFKDYVTLRTRRKHNDVALGDSGV CCCCHHHHHEECCCCCCCCCCCCCCCEEEEEEECCHHHHHHHHHHHHCCCCCEEECCCCE VITEKLSKDLGVKKGDKITVTSSAGKQTEAVVSGITEMYVNHYVYISTEYYNELFGNVPD EEEHHHHHHCCCCCCCEEEEECCCCCHHHHHHHHHHHHHHCCEEEEEEHHHHHHCCCCCC NNRVLIKINGDVSETESYMGDEYLTRDYIKGVSFLNANVTRFENMIQSLDLVTWVLIISA CCEEEEEECCCHHHHHHHCCHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHH GLLAFVVLYNLTNVNISERRREIATIKVLGFFDPEVGMYVYRENIFLTLIGGVFGLLLGR HHHHHHHHHHCCCCCHHHHHHHHEEEEEEEEECCCCCEEEEECCHHHHHHHHHHHHHHHH LLHIYIMLTVEMDAIMFGYAIKPTTYIYSYLITLIFSVVVNLAMYGKLKKLPMVESLKSV HHHHHHHHHEEHHHHHHCEECCHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHCC E C >Mature Secondary Structure GKSVWKDLFREIKRTFGRFIAIFAIVAIGVAFFAGVTASSNDMKNSTDNYYDDYNMSDL CHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCHHH RLLSSIGFNEDDIKAIRAVDGVKGVYPAYSQDAVIRKDSIETAVHIMSVPDNTDRNNENY HHHHHCCCCHHHHHHHHHHHCCCCCCCCCCCCCEEECCCHHHEEEEEECCCCCCCCCHHH INQLRIKEGRLPENSGECVVRYEDTKDNFSIGDTIKLSSGTQDDINDSLKDSEYTVVGTV HHHHEEECCCCCCCCCCEEEEEECCCCCCCCCCEEEECCCCCHHHCCCCCCCCEEEEEEE YTPYYVSYDLGTTNVGSGRINYLMYITEDEFMSDYFNEVFATVDGAKELDTYGTEYKDLV ECCEEEEEECCCCCCCCCCEEEEEEEECHHHHHHHHHHHHHHCCCHHHHHHCCCHHHHHH KETADRIDNISQSRINVRKDDIQDVYEDSVNEAKEAAKAAIYDHVVESLTEQYSNYFVGM HHHHHHHHCCHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCEEECC DVSAIIEPYIQPAYEKALADYDFSSIETQAKEDFESKYGDSDDWKWYELTRQEQYSFKDY CHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHCCCCCCCCHHHHHHHHCCCCHHH ESSADRMKAIATVFPIFFIVVSALVCLTTMTRMVAEERGLIGTYKALGYSKKVIAFKYIA HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCEEHHHHHCCCCHHHHHHHHH YALIASVTGGIAGCIIGLKLFPLVIYNSWNIIYQLPPIVYDSHIFLSIIAITTMVLVTVI HHHHHHHHHHHHHHHHHHHHHHHHHCCCCCEEEECCCCEECCHHHHHHHHHHHHHHHHHH AALFSCYSELEEVPSELMRPKAPKSGKKILLEHITFIWKHMSFTMKVTMRNLFLYKKRFL HHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH MTVVGIAGCTALMTAGFGIKNSIECLIHNQYGELIHYDSVATFTDGITQEDMDTLESDMS HHHHHHHHHHHHHHCCCCCCCCHHEEEECCCCCEEEECCHHHHHCCCCHHHHHHHHHHCC ADVHIDDFLLNCGYSDDVKSSEDTQTAEYVIVDDKNAFKDYVTLRTRRKHNDVALGDSGV CCCCHHHHHEECCCCCCCCCCCCCCCEEEEEEECCHHHHHHHHHHHHCCCCCEEECCCCE VITEKLSKDLGVKKGDKITVTSSAGKQTEAVVSGITEMYVNHYVYISTEYYNELFGNVPD EEEHHHHHHCCCCCCCEEEEECCCCCHHHHHHHHHHHHHHCCEEEEEEHHHHHHCCCCCC NNRVLIKINGDVSETESYMGDEYLTRDYIKGVSFLNANVTRFENMIQSLDLVTWVLIISA CCEEEEEECCCHHHHHHHCCHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHH GLLAFVVLYNLTNVNISERRREIATIKVLGFFDPEVGMYVYRENIFLTLIGGVFGLLLGR HHHHHHHHHHCCCCCHHHHHHHHEEEEEEEEECCCCCEEEEECCHHHHHHHHHHHHHHHH LLHIYIMLTVEMDAIMFGYAIKPTTYIYSYLITLIFSVVVNLAMYGKLKKLPMVESLKSV HHHHHHHHHEEHHHHHHCEECCHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHCC E C
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: NA