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The map label for this gene is iap [H]

Identifier: 238917006

GI number: 238917006

Start: 1088784

End: 1089833

Strand: Reverse

Name: iap [H]

Synonym: EUBELI_01076

Alternate gene names: 238917006

Gene position: 1089833-1088784 (Counterclockwise)

Preceding gene: 238917007

Following gene: 238917005

Centisome position: 50.83

GC content: 39.62

Gene sequence:

>1050_bases
ATGCGTAGGAGAATTTTTAAAGGTTTTGCAGCTATTTTATTGACATCAACTATAACGGTATCGACAGTATTTGCAGTTTA
TGCAGATGATGTTGATAAATTAAAGCAGCAGAAGAAACAGACAGAACAGGAACTTGATGACCTTCAGAACCAGTGGGCTT
ATCTGTTACAGCAGATGGATGATTTGGAACTCAAGATGGCTAATAAATCTGATGAAATTGATGCTGCCAATGTTAAACTT
AAAGAAGCTGAAAAGGTTCAGGCTGCACAGTATGATGATATGAAGCTTCGTATTAAGTATATGTATGAAGATCAGTCTGT
ATCTTTAGCAGAGGTGTTTCTTACTTCATCAGATATGAGTACAATGCTTAATAAAGCTGTTTATATGCAGGAAGTATATA
ATTATGACCGGAATAAACTTGATGAAATGGCTAACACAGCTAAAGAAATTCAAGATCTTAAAACCAGTCTGGAAAATGAT
AAAAAAGAACTTGATGAGGCGCAGGCTCAGTTGACTGAGAAACAGGCTCTTCTTTACAGTACAATTCAAGAAACACAGGC
TAAAGCAGATGATGTGAGCAGCCAGCTTGAATCCGCTGTTAAGAAAGCTGCCGAAGTTGCAGCGAAGAAAGAACAGGAAC
GTCTGGCAGCAGCAGCCGTTTCAATACAGCAGAATATAGCAACACCGGCTAAAGGAGATTCTTCTGTAGCTAATGGGGTG
GTTTCTTTAGCATATTCACTTCTTGGAGTTCCATATGTAAGCGGCGGAAGTTCACCATCAGGTTTTGACTGCTCAGGATT
TACTTCATATCTGTTCAGACAGTATGGAATTAGTATTTCAAGATCATCAAGTGCCCAGGCATATGGTGGTACAGCGGTTA
ACGGACTTGCCAATGCACAGCCTGGTGATGTTATATGTTATCCGGGACATGTTGGAATATATGTAGGTGGAGGACAGATG
ATTCATGCTAATGTTCCAGGTGGTTCAGTAAGGCTTGTTGGTGTTAATTCAATAGGTATGAGCGTAATTGCCATAAGACG
TTACTGGTAA

Upstream 100 bases:

>100_bases
AATTAGTTGTAAAGCCTTGAAATATCGTGTTTTATATATTATAATTACAAAATCGTAAACGATTTTTAACAATTTTGTAA
TAATTTTAATTGAGGTATAT

Downstream 100 bases:

>100_bases
TATTCTAATATATGTGATATAATGAGTGCAGTTTTACAGGGACTGCACTTATTTTTTTATAAATGCATGAAGAGTATGGG
ATTATAATTAAGAAGAAATG

Product: hypothetical protein

Products: NA

Alternate protein names: Invasion-associated protein [H]

Number of amino acids: Translated: 349; Mature: 349

Protein sequence:

>349_residues
MRRRIFKGFAAILLTSTITVSTVFAVYADDVDKLKQQKKQTEQELDDLQNQWAYLLQQMDDLELKMANKSDEIDAANVKL
KEAEKVQAAQYDDMKLRIKYMYEDQSVSLAEVFLTSSDMSTMLNKAVYMQEVYNYDRNKLDEMANTAKEIQDLKTSLEND
KKELDEAQAQLTEKQALLYSTIQETQAKADDVSSQLESAVKKAAEVAAKKEQERLAAAAVSIQQNIATPAKGDSSVANGV
VSLAYSLLGVPYVSGGSSPSGFDCSGFTSYLFRQYGISISRSSSAQAYGGTAVNGLANAQPGDVICYPGHVGIYVGGGQM
IHANVPGGSVRLVGVNSIGMSVIAIRRYW

Sequences:

>Translated_349_residues
MRRRIFKGFAAILLTSTITVSTVFAVYADDVDKLKQQKKQTEQELDDLQNQWAYLLQQMDDLELKMANKSDEIDAANVKL
KEAEKVQAAQYDDMKLRIKYMYEDQSVSLAEVFLTSSDMSTMLNKAVYMQEVYNYDRNKLDEMANTAKEIQDLKTSLEND
KKELDEAQAQLTEKQALLYSTIQETQAKADDVSSQLESAVKKAAEVAAKKEQERLAAAAVSIQQNIATPAKGDSSVANGV
VSLAYSLLGVPYVSGGSSPSGFDCSGFTSYLFRQYGISISRSSSAQAYGGTAVNGLANAQPGDVICYPGHVGIYVGGGQM
IHANVPGGSVRLVGVNSIGMSVIAIRRYW
>Mature_349_residues
MRRRIFKGFAAILLTSTITVSTVFAVYADDVDKLKQQKKQTEQELDDLQNQWAYLLQQMDDLELKMANKSDEIDAANVKL
KEAEKVQAAQYDDMKLRIKYMYEDQSVSLAEVFLTSSDMSTMLNKAVYMQEVYNYDRNKLDEMANTAKEIQDLKTSLEND
KKELDEAQAQLTEKQALLYSTIQETQAKADDVSSQLESAVKKAAEVAAKKEQERLAAAAVSIQQNIATPAKGDSSVANGV
VSLAYSLLGVPYVSGGSSPSGFDCSGFTSYLFRQYGISISRSSSAQAYGGTAVNGLANAQPGDVICYPGHVGIYVGGGQM
IHANVPGGSVRLVGVNSIGMSVIAIRRYW

Specific function: This major extracellular protein may be involved in the invasion of non-professional phagocytic cells by Listeria [H]

COG id: COG0791

COG function: function code M; Cell wall-associated hydrolases (invasion-associated proteins)

Gene ontology:

Cell location: Attached To The Membrane By A Lipid Anchor [C]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Contains 2 LysM repeats [H]

Homologues:

Organism=Escherichia coli, GI1788501, Length=88, Percent_Identity=38.6363636363636, Blast_Score=64, Evalue=1e-11,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR000064
- InterPro:   IPR018392
- InterPro:   IPR002482
- InterPro:   IPR003646
- InterPro:   IPR013247 [H]

Pfam domain/function: PF01476 LysM; PF00877 NLPC_P60; PF08239 SH3_3 [H]

EC number: NA

Molecular weight: Translated: 38164; Mature: 38164

Theoretical pI: Translated: 4.88; Mature: 4.88

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.6 %Cys     (Translated Protein)
3.2 %Met     (Translated Protein)
3.7 %Cys+Met (Translated Protein)
0.6 %Cys     (Mature Protein)
3.2 %Met     (Mature Protein)
3.7 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MRRRIFKGFAAILLTSTITVSTVFAVYADDVDKLKQQKKQTEQELDDLQNQWAYLLQQMD
CCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHC
DLELKMANKSDEIDAANVKLKEAEKVQAAQYDDMKLRIKYMYEDQSVSLAEVFLTSSDMS
CCCEEECCCCCCCCCCCCCHHHHHHHHHHCCCCEEEEEEEEECCCCCHHHHHHHCCHHHH
TMLNKAVYMQEVYNYDRNKLDEMANTAKEIQDLKTSLENDKKELDEAQAQLTEKQALLYS
HHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
TIQETQAKADDVSSQLESAVKKAAEVAAKKEQERLAAAAVSIQQNIATPAKGDSSVANGV
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCHHHHHHH
VSLAYSLLGVPYVSGGSSPSGFDCSGFTSYLFRQYGISISRSSSAQAYGGTAVNGLANAQ
HHHHHHHHCCCEECCCCCCCCCCCHHHHHHHHHHHCCCEECCCCCCCCCCCHHCCCCCCC
PGDVICYPGHVGIYVGGGQMIHANVPGGSVRLVGVNSIGMSVIAIRRYW
CCCEEEECCCEEEEECCCEEEEEECCCCEEEEEEECCCCHHHHEEEECC
>Mature Secondary Structure
MRRRIFKGFAAILLTSTITVSTVFAVYADDVDKLKQQKKQTEQELDDLQNQWAYLLQQMD
CCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHC
DLELKMANKSDEIDAANVKLKEAEKVQAAQYDDMKLRIKYMYEDQSVSLAEVFLTSSDMS
CCCEEECCCCCCCCCCCCCHHHHHHHHHHCCCCEEEEEEEEECCCCCHHHHHHHCCHHHH
TMLNKAVYMQEVYNYDRNKLDEMANTAKEIQDLKTSLENDKKELDEAQAQLTEKQALLYS
HHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
TIQETQAKADDVSSQLESAVKKAAEVAAKKEQERLAAAAVSIQQNIATPAKGDSSVANGV
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCHHHHHHH
VSLAYSLLGVPYVSGGSSPSGFDCSGFTSYLFRQYGISISRSSSAQAYGGTAVNGLANAQ
HHHHHHHHCCCEECCCCCCCCCCCHHHHHHHHHHHCCCEECCCCCCCCCCCHHCCCCCCC
PGDVICYPGHVGIYVGGGQMIHANVPGGSVRLVGVNSIGMSVIAIRRYW
CCCEEEECCCEEEEECCCEEEEEECCCCEEEEEEECCCCHHHHEEEECC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 7.0

TargetDB status: NA

Availability: NA

References: 1514809; 1459966 [H]