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The map label for this gene is yycJ [H]

Identifier: 238917000

GI number: 238917000

Start: 1080392

End: 1081201

Strand: Reverse

Name: yycJ [H]

Synonym: EUBELI_01069

Alternate gene names: 238917000

Gene position: 1081201-1080392 (Counterclockwise)

Preceding gene: 238917001

Following gene: 238916999

Centisome position: 50.42

GC content: 34.07

Gene sequence:

>810_bases
ATGAGAATGATGCCGATTGCCAGTGGAAGCAGTGGTAACTGTATTTATCTTGGTACAGAGGACACACATGTTCTTTTTGA
TGCTGGAATAAGCAGAAAGAGAATTGAAGAAGGACTTAATACGGCAGGTTTAAGCCTTAAAGATATTGATGCAATATTTG
TAACACATGAACATATTGACCATACAAAAGGGCTTGGTGTTATATCAAGAAAAGATGGAATCCCAATCTATTCAACTTCT
GGTACAATAGATGGAATTGAACAGATTTCATCACTTGGTAATATTCCAGATGGAATATTTAATAAGATAAATGCGGATGA
AGATATTTCAATTGGAGATGTAACAGTCCATCCATTCCGTATATCACATGATGCTAACGAACCGGTTGCGTATACATTTA
CTCAAAAATGTGCAGATGGCATAAAAAAAGCATCGGTTGTAACTGATTTAGGGTATTTTGATGATTATGTGGTTGATAAT
CTGACAGAATCTGATATTATGCTTGTTGAGGCTAATCATGATATCAATATGTTACAGGTTGGTCCTTATCCTTTTTATCT
TAAGAAAAGAATATTAGGTAATAAAGGACATCTCTCTAATGAGACATCTGGACAGCTTGTCAATTCCCTGCTTCATGATA
AGCTTAAGAAAATATATCTTGGTCATTTAAGCAAAGAGAATAACTATGATAAACTTGCTTATGAGACGGTGAAGTTAGAA
ATTGATATGTCAGATAACTCATTCAAATCTTCGGATTTTGATATAGAGGTTGCAAAGCGTGATGTTTTATCAGGTATTTG
CGAAATATAA

Upstream 100 bases:

>100_bases
GGGGAAATCTTGTATTCTTACATAACGGAAATGATGCTGATTATTCATCGCCACTTAATGATGGTGATGTTATAGAGCTT
CGCTGGGAGGATAAATAATT

Downstream 100 bases:

>100_bases
CAGGCGCTTACAAGGTGCAGAAAGAGGAAAGCTATGAAAAAATGTGTAATTACTGTTGTAGGAAAAGATACTGTTGGTAT
TATTGCCAGAGTATGTACTT

Product: ribonuclease Z

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 269; Mature: 269

Protein sequence:

>269_residues
MRMMPIASGSSGNCIYLGTEDTHVLFDAGISRKRIEEGLNTAGLSLKDIDAIFVTHEHIDHTKGLGVISRKDGIPIYSTS
GTIDGIEQISSLGNIPDGIFNKINADEDISIGDVTVHPFRISHDANEPVAYTFTQKCADGIKKASVVTDLGYFDDYVVDN
LTESDIMLVEANHDINMLQVGPYPFYLKKRILGNKGHLSNETSGQLVNSLLHDKLKKIYLGHLSKENNYDKLAYETVKLE
IDMSDNSFKSSDFDIEVAKRDVLSGICEI

Sequences:

>Translated_269_residues
MRMMPIASGSSGNCIYLGTEDTHVLFDAGISRKRIEEGLNTAGLSLKDIDAIFVTHEHIDHTKGLGVISRKDGIPIYSTS
GTIDGIEQISSLGNIPDGIFNKINADEDISIGDVTVHPFRISHDANEPVAYTFTQKCADGIKKASVVTDLGYFDDYVVDN
LTESDIMLVEANHDINMLQVGPYPFYLKKRILGNKGHLSNETSGQLVNSLLHDKLKKIYLGHLSKENNYDKLAYETVKLE
IDMSDNSFKSSDFDIEVAKRDVLSGICEI
>Mature_269_residues
MRMMPIASGSSGNCIYLGTEDTHVLFDAGISRKRIEEGLNTAGLSLKDIDAIFVTHEHIDHTKGLGVISRKDGIPIYSTS
GTIDGIEQISSLGNIPDGIFNKINADEDISIGDVTVHPFRISHDANEPVAYTFTQKCADGIKKASVVTDLGYFDDYVVDN
LTESDIMLVEANHDINMLQVGPYPFYLKKRILGNKGHLSNETSGQLVNSLLHDKLKKIYLGHLSKENNYDKLAYETVKLE
IDMSDNSFKSSDFDIEVAKRDVLSGICEI

Specific function: Unknown

COG id: COG1235

COG function: function code R; Metal-dependent hydrolases of the beta-lactamase superfamily I

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: Belongs to the metallo-beta-lactamase superfamily [H]

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR001279 [H]

Pfam domain/function: PF00753 Lactamase_B [H]

EC number: NA

Molecular weight: Translated: 29688; Mature: 29688

Theoretical pI: Translated: 4.82; Mature: 4.82

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.1 %Cys     (Translated Protein)
2.2 %Met     (Translated Protein)
3.3 %Cys+Met (Translated Protein)
1.1 %Cys     (Mature Protein)
2.2 %Met     (Mature Protein)
3.3 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MRMMPIASGSSGNCIYLGTEDTHVLFDAGISRKRIEEGLNTAGLSLKDIDAIFVTHEHID
CCCCCCCCCCCCCEEEECCCCCEEEEECCCCHHHHHHCCCCCCCCHHHCEEEEEEHHHCC
HTKGLGVISRKDGIPIYSTSGTIDGIEQISSLGNIPDGIFNKINADEDISIGDVTVHPFR
CCCCCCEEECCCCCCEEECCCCHHHHHHHHHHCCCCCHHHHHCCCCCCCCCCEEEEEEEE
ISHDANEPVAYTFTQKCADGIKKASVVTDLGYFDDYVVDNLTESDIMLVEANHDINMLQV
ECCCCCCCEEEEHHHHHHHHHHHHHHHHHCCCHHHHHHCCCCCCCEEEEECCCCCEEEEE
GPYPFYLKKRILGNKGHLSNETSGQLVNSLLHDKLKKIYLGHLSKENNYDKLAYETVKLE
CCCCHHHHHHHCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCEEEEEEEEE
IDMSDNSFKSSDFDIEVAKRDVLSGICEI
EEECCCCCCCCCCEEEHHHHHHHHHHHCC
>Mature Secondary Structure
MRMMPIASGSSGNCIYLGTEDTHVLFDAGISRKRIEEGLNTAGLSLKDIDAIFVTHEHID
CCCCCCCCCCCCCEEEECCCCCEEEEECCCCHHHHHHCCCCCCCCHHHCEEEEEEHHHCC
HTKGLGVISRKDGIPIYSTSGTIDGIEQISSLGNIPDGIFNKINADEDISIGDVTVHPFR
CCCCCCEEECCCCCCEEECCCCHHHHHHHHHHCCCCCHHHHHCCCCCCCCCCEEEEEEEE
ISHDANEPVAYTFTQKCADGIKKASVVTDLGYFDDYVVDNLTESDIMLVEANHDINMLQV
ECCCCCCCEEEEHHHHHHHHHHHHHHHHHCCCHHHHHHCCCCCCCEEEEECCCCCEEEEE
GPYPFYLKKRILGNKGHLSNETSGQLVNSLLHDKLKKIYLGHLSKENNYDKLAYETVKLE
CCCCHHHHHHHCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCEEEEEEEEE
IDMSDNSFKSSDFDIEVAKRDVLSGICEI
EEECCCCCCCCCCEEEHHHHHHHHHHHCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 9384377 [H]