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The map label for this gene is 238916964

Identifier: 238916964

GI number: 238916964

Start: 1046368

End: 1047231

Strand: Direct

Name: 238916964

Synonym: EUBELI_01033

Alternate gene names: NA

Gene position: 1046368-1047231 (Clockwise)

Preceding gene: 238916939

Following gene: 238916972

Centisome position: 48.8

GC content: 29.51

Gene sequence:

>864_bases
ATGATAAGCATACTATTATTACTTCTGTTTATTTTTTCGGCATTGTCAGTTCCTGTATGTGAGGGTGTGATATCAGGTCT
GTATCTTTTCGGAATAAAAGTATTTCCGGGTTTATTTATTTCATTTATATTAACAGGCATGCTTGTAAGAATACTGGAAT
ATAAAGGAACAAAAAGTATTGTAATACTTGTACTTGCAGGTATAATGACAGGATTTCCCAATGGAGCATATATATGTTCG
TGGTACAAAAAAAATAATCCGGACAGCAGGTTTACGGACAGGCTGGCAGGTCTGATTAACATTCCAAGCCCGGCGTTTCT
TATAAGTTATGTATATATTAATATTCTTGAAAGGAAAATAAGTTTAGTAATATTTCTTCTTGTTACATATATTCCTGTTA
TTTTATGTTCTATCATTTTATTATTGAAATATAATCATAAGCAGCGCAATGAAAAAAATCTGTCACAGAATCTGAATTTC
AGGAAATTATTTAAAATATTTGAAGAATCAGTAAATGCATCTGTTGAAACCACTCTTAAACTTGGCGTATATATTATACT
TTTTTCCGTAATAATAAGTATAATGCAATGTATCCCGATAAAAGGTTTTATAAATAAAATGTTGGCAGGCTCATTAGAAA
TATCAAATGGACTCTGCATAATAAAACAGTCAGATTTACCATATATATTTAGGCTTTCAGCTATTGTTTTTCTTGATGCA
TTTGGCGGAATATGCACAATAATGCAGACAAAATGTGTATGTGGCCAATACATAAGCATAAAAAAATACATATGTCAGAA
AATGATTCTATGTATTGTAACACAGATAATATTGATTCTGACATATGTATTAAAATTAATATAA

Upstream 100 bases:

>100_bases
TTCCATTGTAATCTCCTTGATTGCAAATTTACATTTTATTATAACACATAATTAGAATTTTTTGAGAATATTATTAAATA
TCAATTGTCAAAGAGGTCGT

Downstream 100 bases:

>100_bases
TCAATTATTCTTCATCATCTGATTGTGAATCAGTTTCGTTAGAAGCGTCAGTATCAGCAGATTCTTCTGTACTGTTTTCT
TCTATTCCACTAAGTTCATT

Product: spermidine/putrescine transport system permease

Products: NA

Alternate protein names: Sporulation Integral Membrane Protein YlbJ; Spermidine/Putrescine Transport System Permease Protein; Nucleoside Recognition Domain Protein

Number of amino acids: Translated: 287; Mature: 287

Protein sequence:

>287_residues
MISILLLLLFIFSALSVPVCEGVISGLYLFGIKVFPGLFISFILTGMLVRILEYKGTKSIVILVLAGIMTGFPNGAYICS
WYKKNNPDSRFTDRLAGLINIPSPAFLISYVYINILERKISLVIFLLVTYIPVILCSIILLLKYNHKQRNEKNLSQNLNF
RKLFKIFEESVNASVETTLKLGVYIILFSVIISIMQCIPIKGFINKMLAGSLEISNGLCIIKQSDLPYIFRLSAIVFLDA
FGGICTIMQTKCVCGQYISIKKYICQKMILCIVTQIILILTYVLKLI

Sequences:

>Translated_287_residues
MISILLLLLFIFSALSVPVCEGVISGLYLFGIKVFPGLFISFILTGMLVRILEYKGTKSIVILVLAGIMTGFPNGAYICS
WYKKNNPDSRFTDRLAGLINIPSPAFLISYVYINILERKISLVIFLLVTYIPVILCSIILLLKYNHKQRNEKNLSQNLNF
RKLFKIFEESVNASVETTLKLGVYIILFSVIISIMQCIPIKGFINKMLAGSLEISNGLCIIKQSDLPYIFRLSAIVFLDA
FGGICTIMQTKCVCGQYISIKKYICQKMILCIVTQIILILTYVLKLI
>Mature_287_residues
MISILLLLLFIFSALSVPVCEGVISGLYLFGIKVFPGLFISFILTGMLVRILEYKGTKSIVILVLAGIMTGFPNGAYICS
WYKKNNPDSRFTDRLAGLINIPSPAFLISYVYINILERKISLVIFLLVTYIPVILCSIILLLKYNHKQRNEKNLSQNLNF
RKLFKIFEESVNASVETTLKLGVYIILFSVIISIMQCIPIKGFINKMLAGSLEISNGLCIIKQSDLPYIFRLSAIVFLDA
FGGICTIMQTKCVCGQYISIKKYICQKMILCIVTQIILILTYVLKLI

Specific function: Unknown

COG id: COG3314

COG function: function code S; Uncharacterized protein conserved in bacteria

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 32300; Mature: 32300

Theoretical pI: Translated: 9.65; Mature: 9.65

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

3.5 %Cys     (Translated Protein)
2.4 %Met     (Translated Protein)
5.9 %Cys+Met (Translated Protein)
3.5 %Cys     (Mature Protein)
2.4 %Met     (Mature Protein)
5.9 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MISILLLLLFIFSALSVPVCEGVISGLYLFGIKVFPGLFISFILTGMLVRILEYKGTKSI
CHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHH
VILVLAGIMTGFPNGAYICSWYKKNNPDSRFTDRLAGLINIPSPAFLISYVYINILERKI
HHHHHHHHHHCCCCCCEEEEECCCCCCCHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHH
SLVIFLLVTYIPVILCSIILLLKYNHKQRNEKNLSQNLNFRKLFKIFEESVNASVETTLK
HHHHHHHHHHHHHHHHHHHHHHHCCCHHCCHHHHHHCCCHHHHHHHHHHHHCCCHHHHHH
LGVYIILFSVIISIMQCIPIKGFINKMLAGSLEISNGLCIIKQSDLPYIFRLSAIVFLDA
HHHHHHHHHHHHHHHHHCCHHHHHHHHHHCCEEECCCEEEEEECCCCHHHHHHHHHHHHH
FGGICTIMQTKCVCGQYISIKKYICQKMILCIVTQIILILTYVLKLI
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHC
>Mature Secondary Structure
MISILLLLLFIFSALSVPVCEGVISGLYLFGIKVFPGLFISFILTGMLVRILEYKGTKSI
CHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHH
VILVLAGIMTGFPNGAYICSWYKKNNPDSRFTDRLAGLINIPSPAFLISYVYINILERKI
HHHHHHHHHHCCCCCCEEEEECCCCCCCHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHH
SLVIFLLVTYIPVILCSIILLLKYNHKQRNEKNLSQNLNFRKLFKIFEESVNASVETTLK
HHHHHHHHHHHHHHHHHHHHHHHCCCHHCCHHHHHHCCCHHHHHHHHHHHHCCCHHHHHH
LGVYIILFSVIISIMQCIPIKGFINKMLAGSLEISNGLCIIKQSDLPYIFRLSAIVFLDA
HHHHHHHHHHHHHHHHHCCHHHHHHHHHHCCEEECCCEEEEEECCCCHHHHHHHHHHHHH
FGGICTIMQTKCVCGQYISIKKYICQKMILCIVTQIILILTYVLKLI
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA