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The map label for this gene is rpmB

Identifier: 238916887

GI number: 238916887

Start: 972380

End: 972565

Strand: Direct

Name: rpmB

Synonym: EUBELI_00956

Alternate gene names: 238916887

Gene position: 972380-972565 (Clockwise)

Preceding gene: 238916886

Following gene: 238916888

Centisome position: 45.35

GC content: 36.02

Gene sequence:

>186_bases
ATGGCTAAGTGTGCAATTTGCGAAAAAGGTCCTCACTTTGGTAATGCAGTGAGTCATTCTCATAGAAGATCTAATAAAGT
TTGGAATGCTAATGTTAAGTCTGTTAAAGTAAAGGTTAACGGAAATGCTAAGAAGATGTATGTTTGTACTTCATGCTTAC
GTTCTGGTTTAGTTGAGCGTGCATAA

Upstream 100 bases:

>100_bases
GAAAATTCTTGAAAAATGTGTTGCAAAATATTTTTTTATCTGATACAATAATTTCTGTTGTGGGTAAATTACCCAATACC
GGTAAGGAGGTGTTATTGAA

Downstream 100 bases:

>100_bases
TCTATGAGCTTTAAAGTTAATACCAGTATATTAAGGTGAATTGCGCAAAACGCGATTCACTTTATTTTTTGGACATTCAT
TTGATAATCAAAGTTTAATA

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 61; Mature: 60

Protein sequence:

>61_residues
MAKCAICEKGPHFGNAVSHSHRRSNKVWNANVKSVKVKVNGNAKKMYVCTSCLRSGLVERA

Sequences:

>Translated_61_residues
MAKCAICEKGPHFGNAVSHSHRRSNKVWNANVKSVKVKVNGNAKKMYVCTSCLRSGLVERA
>Mature_60_residues
AKCAICEKGPHFGNAVSHSHRRSNKVWNANVKSVKVKVNGNAKKMYVCTSCLRSGLVERA

Specific function: Unknown

COG id: COG0227

COG function: function code J; Ribosomal protein L28

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: Belongs to the ribosomal protein L28P family

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): RL28_EUBE2 (C4Z044)

Other databases:

- EMBL:   CP001104
- RefSeq:   YP_002930404.1
- ProteinModelPortal:   C4Z044
- GeneID:   7957817
- GenomeReviews:   CP001104_GR
- KEGG:   eel:EUBELI_00956
- OMA:   TRCLRSN
- ProtClustDB:   CLSK2540997
- GO:   GO:0005840
- GO:   GO:0006412
- HAMAP:   MF_00373
- InterPro:   IPR001383
- TIGRFAMs:   TIGR00009

Pfam domain/function: PF00830 Ribosomal_L28

EC number: NA

Molecular weight: Translated: 6702; Mature: 6571

Theoretical pI: Translated: 10.82; Mature: 10.82

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

6.6 %Cys     (Translated Protein)
3.3 %Met     (Translated Protein)
9.8 %Cys+Met (Translated Protein)
6.7 %Cys     (Mature Protein)
1.7 %Met     (Mature Protein)
8.3 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MAKCAICEKGPHFGNAVSHSHRRSNKVWNANVKSVKVKVNGNAKKMYVCTSCLRSGLVER
CCCCCCCCCCCCCCCCCCCCCCCCCCEECCCCEEEEEEECCCCEEEHHHHHHHHHCCCCC
A
C
>Mature Secondary Structure 
AKCAICEKGPHFGNAVSHSHRRSNKVWNANVKSVKVKVNGNAKKMYVCTSCLRSGLVER
CCCCCCCCCCCCCCCCCCCCCCCCCEECCCCEEEEEEECCCCEEEHHHHHHHHHCCCCC
A
C

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA