BacMap

Definition	Eubacterium eligens ATCC 27750 chromosome, complete genome.
Accession	NC_012778
Length	2,144,190

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The map label for this gene is yybJ [H]

Identifier: 238916812

GI number: 238916812

Start: 891653

End: 892291

Strand: Direct

Name: yybJ [H]

Synonym: EUBELI_00879

Alternate gene names: 238916812

Gene position: 891653-892291 (Clockwise)

Preceding gene: 238916811

Following gene: 238916813

Centisome position: 41.58

GC content: 35.52

Gene sequence:

>639_bases
ATGTATATTAAAATAACAGATGTTAATAAAACGATTAAGAAAGCACCAATATTAAGGGATATCAATCTGGAATTTACAGG
TGGAAAAGTATATGGATTAAGAGGAAAGAATGGTTCAGGAAAGACTATGCTTATGCGTGCAATATGCGGGCTTATTACTC
CGGATTCGGGAATAATTGATATTAATGGAAAGATACTTGGAAAAGATATCTCATTTCCGGAAAGTATAGGCGTGTTAATT
GAGAATCCTGCATTTATAGGTAATTATACAGGATTTAAGAATCTTAAGGTGCTGGCATCTATTCAGAACAGAATTGGTGA
TGAACAGATAAGAAAGGCACTTGAAGATATCGGACTTGATCCGGATGACAAGAGAACTTACAGAAAGTATTCTCTGGGAA
TGAAGCAGAAGTTAGGAATTGCGGCAGCAGTTATGGAAAATCCTGATATTATTATTCTTGACGAGCCGATTAATGCACTT
GATGATGTCAGTGTTGAGAAGGTTCATGATATATTAGAAGAACAGAAGAAAAGAGGAGCGGTAATAATTATTGCATGCCA
CGATAAGGAAGAACTTGACCAGCTATCTGATGAGATTATAGAGATATCAGATGGCAGAATTATCAATAAAACCTGTTAG

Upstream 100 bases:

>100_bases
GCAGTCAGCTGCGGTATGCATTGTTGTGTATATTGTCGTGTATGTGGTTGGAATGATTGGATTTAATAAAAAAGATATTC
TTGTGAGGGAGGATTAAAAC

Downstream 100 bases:

>100_bases
TAGTATCATTACATAGTACTGGCGTAATGTTACAAAAATGTAATGTTCCGTAATATTGAACAAACGACACCGGATTAGTT
AAGTGGTAAAACATAATTAA

Product: antibiotic transport system ATP-binding protein

Products: ADP; phosphate; S2O32- [Cytoplasm]; SO42- [Cytoplasm] [C]

Alternate protein names: NA

Number of amino acids: Translated: 212; Mature: 212

Protein sequence:

>212_residues
MYIKITDVNKTIKKAPILRDINLEFTGGKVYGLRGKNGSGKTMLMRAICGLITPDSGIIDINGKILGKDISFPESIGVLI
ENPAFIGNYTGFKNLKVLASIQNRIGDEQIRKALEDIGLDPDDKRTYRKYSLGMKQKLGIAAAVMENPDIIILDEPINAL
DDVSVEKVHDILEEQKKRGAVIIIACHDKEELDQLSDEIIEISDGRIINKTC

Sequences:

>Translated_212_residues
MYIKITDVNKTIKKAPILRDINLEFTGGKVYGLRGKNGSGKTMLMRAICGLITPDSGIIDINGKILGKDISFPESIGVLI
ENPAFIGNYTGFKNLKVLASIQNRIGDEQIRKALEDIGLDPDDKRTYRKYSLGMKQKLGIAAAVMENPDIIILDEPINAL
DDVSVEKVHDILEEQKKRGAVIIIACHDKEELDQLSDEIIEISDGRIINKTC
>Mature_212_residues
MYIKITDVNKTIKKAPILRDINLEFTGGKVYGLRGKNGSGKTMLMRAICGLITPDSGIIDINGKILGKDISFPESIGVLI
ENPAFIGNYTGFKNLKVLASIQNRIGDEQIRKALEDIGLDPDDKRTYRKYSLGMKQKLGIAAAVMENPDIIILDEPINAL
DDVSVEKVHDILEEQKKRGAVIIIACHDKEELDQLSDEIIEISDGRIINKTC

Specific function: Part Of The Abc Transporter Complex Cysawtp Involved In Sulfate/Thiosulfate Import. Responsible For Energy Coupling To The Transport System. [C]

COG id: NA

COG function: NA

Gene ontology:

Cell location: Inner Membrane-Associated [C]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Contains 1 ABC transporter domain [H]

Homologues:

Organism=Homo sapiens, GI31657092, Length=197, Percent_Identity=31.4720812182741, Blast_Score=97, Evalue=9e-21,
Organism=Homo sapiens, GI116734710, Length=213, Percent_Identity=29.5774647887324, Blast_Score=92, Evalue=3e-19,
Organism=Homo sapiens, GI27262624, Length=215, Percent_Identity=29.7674418604651, Blast_Score=91, Evalue=6e-19,
Organism=Homo sapiens, GI27262626, Length=215, Percent_Identity=29.7674418604651, Blast_Score=91, Evalue=6e-19,
Organism=Homo sapiens, GI105990541, Length=196, Percent_Identity=27.0408163265306, Blast_Score=87, Evalue=1e-17,
Organism=Homo sapiens, GI27881501, Length=192, Percent_Identity=28.6458333333333, Blast_Score=85, Evalue=5e-17,
Organism=Homo sapiens, GI30795238, Length=192, Percent_Identity=28.6458333333333, Blast_Score=85, Evalue=5e-17,
Organism=Homo sapiens, GI21536376, Length=195, Percent_Identity=29.2307692307692, Blast_Score=80, Evalue=2e-15,
Organism=Homo sapiens, GI11967969, Length=206, Percent_Identity=25.2427184466019, Blast_Score=77, Evalue=1e-14,
Organism=Homo sapiens, GI150417984, Length=203, Percent_Identity=28.5714285714286, Blast_Score=77, Evalue=1e-14,
Organism=Homo sapiens, GI45446740, Length=218, Percent_Identity=29.8165137614679, Blast_Score=76, Evalue=2e-14,
Organism=Homo sapiens, GI47078218, Length=218, Percent_Identity=29.8165137614679, Blast_Score=76, Evalue=2e-14,
Organism=Homo sapiens, GI27477115, Length=215, Percent_Identity=24.6511627906977, Blast_Score=74, Evalue=9e-14,
Organism=Homo sapiens, GI27436953, Length=215, Percent_Identity=25.5813953488372, Blast_Score=73, Evalue=2e-13,
Organism=Homo sapiens, GI255708477, Length=207, Percent_Identity=30.9178743961353, Blast_Score=72, Evalue=4e-13,
Organism=Homo sapiens, GI153792144, Length=212, Percent_Identity=25.9433962264151, Blast_Score=70, Evalue=1e-12,
Organism=Homo sapiens, GI6005701, Length=195, Percent_Identity=25.6410256410256, Blast_Score=69, Evalue=4e-12,
Organism=Homo sapiens, GI9961250, Length=207, Percent_Identity=27.0531400966184, Blast_Score=66, Evalue=2e-11,
Organism=Homo sapiens, GI4505771, Length=207, Percent_Identity=27.0531400966184, Blast_Score=66, Evalue=2e-11,
Organism=Homo sapiens, GI9961252, Length=207, Percent_Identity=27.0531400966184, Blast_Score=65, Evalue=3e-11,
Organism=Homo sapiens, GI62526033, Length=212, Percent_Identity=25.4716981132075, Blast_Score=65, Evalue=4e-11,
Organism=Homo sapiens, GI42741659, Length=210, Percent_Identity=27.6190476190476, Blast_Score=64, Evalue=9e-11,
Organism=Escherichia coli, GI1788761, Length=217, Percent_Identity=29.0322580645161, Blast_Score=91, Evalue=5e-20,
Organism=Escherichia coli, GI1788210, Length=222, Percent_Identity=28.8288288288288, Blast_Score=90, Evalue=1e-19,
Organism=Escherichia coli, GI87081782, Length=196, Percent_Identity=26.530612244898, Blast_Score=89, Evalue=2e-19,
Organism=Escherichia coli, GI1789873, Length=198, Percent_Identity=27.2727272727273, Blast_Score=88, Evalue=5e-19,
Organism=Escherichia coli, GI1787370, Length=209, Percent_Identity=27.2727272727273, Blast_Score=87, Evalue=7e-19,
Organism=Escherichia coli, GI1786563, Length=208, Percent_Identity=28.8461538461538, Blast_Score=86, Evalue=2e-18,
Organism=Escherichia coli, GI1790525, Length=217, Percent_Identity=26.7281105990783, Blast_Score=84, Evalue=1e-17,
Organism=Escherichia coli, GI1786398, Length=224, Percent_Identity=25.4464285714286, Blast_Score=81, Evalue=4e-17,
Organism=Escherichia coli, GI1788450, Length=226, Percent_Identity=25.6637168141593, Blast_Score=81, Evalue=5e-17,
Organism=Escherichia coli, GI1787105, Length=209, Percent_Identity=27.7511961722488, Blast_Score=81, Evalue=5e-17,
Organism=Escherichia coli, GI1788472, Length=216, Percent_Identity=25.9259259259259, Blast_Score=81, Evalue=6e-17,
Organism=Escherichia coli, GI48995001, Length=221, Percent_Identity=22.6244343891403, Blast_Score=81, Evalue=6e-17,
Organism=Escherichia coli, GI87081834, Length=201, Percent_Identity=25.8706467661692, Blast_Score=78, Evalue=3e-16,
Organism=Escherichia coli, GI1789890, Length=210, Percent_Identity=28.5714285714286, Blast_Score=77, Evalue=7e-16,
Organism=Escherichia coli, GI1788225, Length=222, Percent_Identity=25.2252252252252, Blast_Score=77, Evalue=8e-16,
Organism=Escherichia coli, GI1790467, Length=209, Percent_Identity=25.3588516746411, Blast_Score=77, Evalue=8e-16,
Organism=Escherichia coli, GI87081791, Length=215, Percent_Identity=23.7209302325581, Blast_Score=75, Evalue=3e-15,
Organism=Escherichia coli, GI1789032, Length=202, Percent_Identity=27.7227722772277, Blast_Score=75, Evalue=4e-15,
Organism=Escherichia coli, GI1787041, Length=218, Percent_Identity=27.0642201834862, Blast_Score=75, Evalue=4e-15,
Organism=Escherichia coli, GI1787712, Length=184, Percent_Identity=26.6304347826087, Blast_Score=75, Evalue=4e-15,
Organism=Escherichia coli, GI1790190, Length=220, Percent_Identity=25.9090909090909, Blast_Score=74, Evalue=7e-15,
Organism=Escherichia coli, GI87081709, Length=215, Percent_Identity=26.046511627907, Blast_Score=73, Evalue=1e-14,
Organism=Escherichia coli, GI1788165, Length=200, Percent_Identity=24.5, Blast_Score=73, Evalue=2e-14,
Organism=Escherichia coli, GI1786319, Length=205, Percent_Identity=28.780487804878, Blast_Score=72, Evalue=3e-14,
Organism=Escherichia coli, GI1786345, Length=212, Percent_Identity=26.8867924528302, Blast_Score=72, Evalue=3e-14,
Organism=Escherichia coli, GI1788506, Length=214, Percent_Identity=25.2336448598131, Blast_Score=71, Evalue=6e-14,
Organism=Escherichia coli, GI1789593, Length=209, Percent_Identity=24.8803827751196, Blast_Score=70, Evalue=1e-13,
Organism=Escherichia coli, GI1787758, Length=208, Percent_Identity=25.4807692307692, Blast_Score=70, Evalue=2e-13,
Organism=Escherichia coli, GI1787547, Length=202, Percent_Identity=28.2178217821782, Blast_Score=70, Evalue=2e-13,
Organism=Escherichia coli, GI48994943, Length=220, Percent_Identity=25.9090909090909, Blast_Score=69, Evalue=3e-13,
Organism=Escherichia coli, GI1787089, Length=224, Percent_Identity=24.1071428571429, Blast_Score=69, Evalue=3e-13,
Organism=Escherichia coli, GI1790544, Length=230, Percent_Identity=23.0434782608696, Blast_Score=69, Evalue=3e-13,
Organism=Escherichia coli, GI1788897, Length=217, Percent_Identity=26.2672811059908, Blast_Score=69, Evalue=3e-13,
Organism=Escherichia coli, GI1787792, Length=204, Percent_Identity=24.5098039215686, Blast_Score=67, Evalue=6e-13,
Organism=Escherichia coli, GI1786698, Length=207, Percent_Identity=25.6038647342995, Blast_Score=67, Evalue=7e-13,
Organism=Escherichia coli, GI1790162, Length=233, Percent_Identity=26.1802575107296, Blast_Score=67, Evalue=8e-13,
Organism=Escherichia coli, GI1790739, Length=217, Percent_Identity=23.5023041474654, Blast_Score=66, Evalue=1e-12,
Organism=Escherichia coli, GI1789672, Length=221, Percent_Identity=25.3393665158371, Blast_Score=66, Evalue=2e-12,
Organism=Escherichia coli, GI1786803, Length=207, Percent_Identity=23.1884057971014, Blast_Score=65, Evalue=2e-12,
Organism=Escherichia coli, GI145693107, Length=215, Percent_Identity=24.1860465116279, Blast_Score=65, Evalue=2e-12,
Organism=Escherichia coli, GI87082268, Length=210, Percent_Identity=23.8095238095238, Blast_Score=65, Evalue=3e-12,
Organism=Escherichia coli, GI1789991, Length=217, Percent_Identity=26.7281105990783, Blast_Score=65, Evalue=3e-12,
Organism=Escherichia coli, GI1787500, Length=204, Percent_Identity=27.4509803921569, Blast_Score=65, Evalue=4e-12,
Organism=Escherichia coli, GI1787164, Length=204, Percent_Identity=24.0196078431373, Blast_Score=64, Evalue=6e-12,
Organism=Escherichia coli, GI1787029, Length=216, Percent_Identity=24.0740740740741, Blast_Score=64, Evalue=6e-12,
Organism=Escherichia coli, GI1786872, Length=215, Percent_Identity=25.1162790697674, Blast_Score=64, Evalue=8e-12,
Organism=Escherichia coli, GI1787143, Length=212, Percent_Identity=29.2452830188679, Blast_Score=64, Evalue=9e-12,
Organism=Escherichia coli, GI1786253, Length=217, Percent_Identity=22.1198156682028, Blast_Score=64, Evalue=9e-12,
Organism=Escherichia coli, GI1789962, Length=205, Percent_Identity=26.3414634146341, Blast_Score=63, Evalue=1e-11,
Organism=Escherichia coli, GI1789751, Length=193, Percent_Identity=27.4611398963731, Blast_Score=62, Evalue=2e-11,
Organism=Escherichia coli, GI1789586, Length=216, Percent_Identity=24.537037037037, Blast_Score=60, Evalue=8e-11,
Organism=Caenorhabditis elegans, GI115533608, Length=187, Percent_Identity=28.3422459893048, Blast_Score=82, Evalue=2e-16,
Organism=Caenorhabditis elegans, GI17510237, Length=201, Percent_Identity=25.8706467661692, Blast_Score=72, Evalue=2e-13,
Organism=Caenorhabditis elegans, GI71983523, Length=192, Percent_Identity=26.0416666666667, Blast_Score=71, Evalue=4e-13,
Organism=Caenorhabditis elegans, GI71983516, Length=192, Percent_Identity=26.0416666666667, Blast_Score=71, Evalue=4e-13,
Organism=Caenorhabditis elegans, GI71983510, Length=192, Percent_Identity=26.0416666666667, Blast_Score=71, Evalue=4e-13,
Organism=Caenorhabditis elegans, GI17565586, Length=194, Percent_Identity=25.7731958762887, Blast_Score=70, Evalue=8e-13,
Organism=Caenorhabditis elegans, GI17565938, Length=187, Percent_Identity=28.3422459893048, Blast_Score=69, Evalue=1e-12,
Organism=Caenorhabditis elegans, GI17569081, Length=154, Percent_Identity=31.1688311688312, Blast_Score=67, Evalue=6e-12,
Organism=Caenorhabditis elegans, GI17543740, Length=189, Percent_Identity=31.2169312169312, Blast_Score=65, Evalue=2e-11,
Organism=Caenorhabditis elegans, GI115533592, Length=208, Percent_Identity=26.4423076923077, Blast_Score=64, Evalue=6e-11,
Organism=Caenorhabditis elegans, GI212646699, Length=203, Percent_Identity=28.0788177339901, Blast_Score=64, Evalue=8e-11,
Organism=Caenorhabditis elegans, GI17551702, Length=225, Percent_Identity=26.6666666666667, Blast_Score=63, Evalue=9e-11,
Organism=Caenorhabditis elegans, GI193202349, Length=222, Percent_Identity=28.8288288288288, Blast_Score=63, Evalue=1e-10,
Organism=Drosophila melanogaster, GI28574150, Length=207, Percent_Identity=29.4685990338164, Blast_Score=82, Evalue=2e-16,
Organism=Drosophila melanogaster, GI116007328, Length=207, Percent_Identity=29.4685990338164, Blast_Score=82, Evalue=2e-16,
Organism=Drosophila melanogaster, GI24666092, Length=209, Percent_Identity=23.9234449760766, Blast_Score=81, Evalue=4e-16,
Organism=Drosophila melanogaster, GI221500365, Length=212, Percent_Identity=25.9433962264151, Blast_Score=80, Evalue=8e-16,
Organism=Drosophila melanogaster, GI116007184, Length=212, Percent_Identity=25.9433962264151, Blast_Score=80, Evalue=8e-16,
Organism=Drosophila melanogaster, GI221512771, Length=218, Percent_Identity=24.7706422018349, Blast_Score=79, Evalue=2e-15,
Organism=Drosophila melanogaster, GI24666836, Length=225, Percent_Identity=26.6666666666667, Blast_Score=74, Evalue=1e-13,
Organism=Drosophila melanogaster, GI24648314, Length=210, Percent_Identity=22.8571428571429, Blast_Score=73, Evalue=1e-13,
Organism=Drosophila melanogaster, GI24643674, Length=209, Percent_Identity=22.9665071770335, Blast_Score=73, Evalue=2e-13,
Organism=Drosophila melanogaster, GI24582014, Length=184, Percent_Identity=29.8913043478261, Blast_Score=72, Evalue=2e-13,
Organism=Drosophila melanogaster, GI24582012, Length=184, Percent_Identity=29.8913043478261, Blast_Score=72, Evalue=2e-13,
Organism=Drosophila melanogaster, GI28574533, Length=201, Percent_Identity=27.8606965174129, Blast_Score=71, Evalue=6e-13,
Organism=Drosophila melanogaster, GI17647959, Length=204, Percent_Identity=29.4117647058824, Blast_Score=67, Evalue=8e-12,
Organism=Drosophila melanogaster, GI28573571, Length=213, Percent_Identity=23.943661971831, Blast_Score=65, Evalue=2e-11,
Organism=Drosophila melanogaster, GI23397593, Length=214, Percent_Identity=27.1028037383178, Blast_Score=65, Evalue=3e-11,
Organism=Drosophila melanogaster, GI28573573, Length=207, Percent_Identity=24.6376811594203, Blast_Score=64, Evalue=5e-11,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR003439
- InterPro:   IPR017871
- InterPro:   IPR003593 [H]

Pfam domain/function: PF00005 ABC_tran [H]

EC number: 3.6.3.25 [C]

Molecular weight: Translated: 23452; Mature: 23452

Theoretical pI: Translated: 5.44; Mature: 5.44

Prosite motif: PS00211 ABC_TRANSPORTER_1 ; PS50893 ABC_TRANSPORTER_2

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.4 %Cys     (Translated Protein)
2.4 %Met     (Translated Protein)
3.8 %Cys+Met (Translated Protein)
1.4 %Cys     (Mature Protein)
2.4 %Met     (Mature Protein)
3.8 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MYIKITDVNKTIKKAPILRDINLEFTGGKVYGLRGKNGSGKTMLMRAICGLITPDSGIID
CEEEEECCCHHHHHCCCEEECEEEEECCEEEEEECCCCCCHHHHHHHHHHHCCCCCCEEE
INGKILGKDISFPESIGVLIENPAFIGNYTGFKNLKVLASIQNRIGDEQIRKALEDIGLD
ECCEEEECCCCCCCCCCEEEECCEEEECCCCCCHHHHHHHHHHCCCHHHHHHHHHHCCCC
PDDKRTYRKYSLGMKQKLGIAAAVMENPDIIILDEPINALDDVSVEKVHDILEEQKKRGA
CCCHHHHHHHHCCCHHHHCEEEEEECCCCEEEECCCCCCHHCCCHHHHHHHHHHHHHCCC
VIIIACHDKEELDQLSDEIIEISDGRIINKTC
EEEEEECCHHHHHHHHHHHEECCCCEEECCCC
>Mature Secondary Structure
MYIKITDVNKTIKKAPILRDINLEFTGGKVYGLRGKNGSGKTMLMRAICGLITPDSGIID
CEEEEECCCHHHHHCCCEEECEEEEECCEEEEEECCCCCCHHHHHHHHHHHCCCCCCEEE
INGKILGKDISFPESIGVLIENPAFIGNYTGFKNLKVLASIQNRIGDEQIRKALEDIGLD
ECCEEEECCCCCCCCCCEEEECCEEEECCCCCCHHHHHHHHHHCCCHHHHHHHHHHCCCC
PDDKRTYRKYSLGMKQKLGIAAAVMENPDIIILDEPINALDDVSVEKVHDILEEQKKRGA
CCCHHHHHHHHCCCHHHHCEEEEEECCCCEEEECCCCCCHHCCCHHHHHHHHHHHHHCCC
VIIIACHDKEELDQLSDEIIEISDGRIINKTC
EEEEEECCHHHHHHHHHHHEECCCCEEECCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: S2O32- [Periplasm]; H2O; SO42- [Periplasm]; ATP [C]

Specific reaction: ATP + S2O32- [Periplasm] + H2O = ADP + phosphate + S2O32- [Cytoplasm] SO42- [Periplasm] + H2O + ATP = SO42- [Cytoplasm] + phosphate + ADP [C]

General reaction: NA

Inhibitor: NA

Structure determination priority: 7.0

TargetDB status: NA

Availability: NA

References: 1938973; 7584024; 9384377 [H]