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The map label for this gene is tsf [H]

Identifier: 238916784

GI number: 238916784

Start: 858381

End: 859463

Strand: Direct

Name: tsf [H]

Synonym: EUBELI_00846

Alternate gene names: 238916784

Gene position: 858381-859463 (Clockwise)

Preceding gene: 238916783

Following gene: 238916785

Centisome position: 40.03

GC content: 42.01

Gene sequence:

>1083_bases
ATGGCAGCAGTTACAGCAGCAATGGTTAAGGAACTTAGAGAGTCTACTGGCGCAGGTATGATGGAGTGTAAGAAGGCTCT
TACAGAGACAGATGGCGATATGGAAGCAGCTGTTGATGTTCTTAGAAAGAGCGGAGCAGCTAAGGTTGAGAAGAAGGCAG
GAAGAATTGCAGCAGAAGGTATTACAAGAGTAGCATCTGAAGGTAATACAGCAGTTGTAGTAGAAGTTAATTCAGAGACA
GATTTCGTAGCAAAGAACGCTACATTCCAGGAATTTGTTCAGGCAGTTGCAGATAAGGCACTTAAGGCTTCAGTTGATAA
GGCTGGAGATGGCGAAGATGTATGCGCTATCCTTGATATGCAGTCAGAACTTGAAGAGAAGACTCTTACAATCGGTGAGA
AGCTTTCTATCAGAAGATTCCAGAAGATTACAGGTGACTGTGTTGCTTCATATATTCACGGTGGCGGAAGAATTGGTGTT
CTTGTTGCAGCAGATGGCGCTTCTAATGATGCAATCAAAGAAGCACTTACTAACGTAGCAATGCAGATTGCAGCTATGAA
CCCACAGTACCTTAGCAGAAACGATATGTCAGCAGATGAACTTGCTAAGTTAAGAGAGATTACAGAGAAGAGTGCATTAA
ATGATCCAGCTTCTCTTCCAAAGCCAATCTTAAACAAGTTAATTGATAAGGCTATTAATGATAAGGTATGGAGCGATGCT
GATATTGCAACATACGAAGAGCATAAGAGCAACATGCAGTACTTATTCAACTTCCTTTCAAAGGAAGCAGCTGCACAGTT
AGCAGAGCTTGCATTAGCTGATGAGGCTAATATCGTAGCAGATAAGATTTTCAACGGATTAGTAGAAGGCCGTGTATCTA
AGCAGCTTAAGGAAATCTGCCTTATGGATCAGGTTTATGTTAAGGCTGAGGATGGAAAGCAGTCAGTTGCTAAGTACCTT
GCAGAAGTTGCTAAGGCTAATGGCGCTTTCACAGTTAAGGGATATGTTCGTTTTGAGACAGGTGAAGGTCTTGAGAAGAA
AAATGAAGACTTTGCAGCAGAAGTTGCAGCTCAGTTACAGTAA

Upstream 100 bases:

>100_bases
CTTAATATTTAAGTTTTGACTTAAGTTTATGTATGCTTCAGCCTGACATATTATCAGGTTGAAGCATTTTTTAAAATTAT
TTTTATTGGAGGATAATATA

Downstream 100 bases:

>100_bases
TTATAATTACTAAGTTTATTAAATCTCCGGATGTCTTATGGCAGACCGGAGATTTTTTGTGCGTATAGTACGAAAAATTT
GTCATAACGCTTCTAAAATT

Product: elongation factor EF-Ts

Products: NA

Alternate protein names: EF-Ts [H]

Number of amino acids: Translated: 360; Mature: 359

Protein sequence:

>360_residues
MAAVTAAMVKELRESTGAGMMECKKALTETDGDMEAAVDVLRKSGAAKVEKKAGRIAAEGITRVASEGNTAVVVEVNSET
DFVAKNATFQEFVQAVADKALKASVDKAGDGEDVCAILDMQSELEEKTLTIGEKLSIRRFQKITGDCVASYIHGGGRIGV
LVAADGASNDAIKEALTNVAMQIAAMNPQYLSRNDMSADELAKLREITEKSALNDPASLPKPILNKLIDKAINDKVWSDA
DIATYEEHKSNMQYLFNFLSKEAAAQLAELALADEANIVADKIFNGLVEGRVSKQLKEICLMDQVYVKAEDGKQSVAKYL
AEVAKANGAFTVKGYVRFETGEGLEKKNEDFAAEVAAQLQ

Sequences:

>Translated_360_residues
MAAVTAAMVKELRESTGAGMMECKKALTETDGDMEAAVDVLRKSGAAKVEKKAGRIAAEGITRVASEGNTAVVVEVNSET
DFVAKNATFQEFVQAVADKALKASVDKAGDGEDVCAILDMQSELEEKTLTIGEKLSIRRFQKITGDCVASYIHGGGRIGV
LVAADGASNDAIKEALTNVAMQIAAMNPQYLSRNDMSADELAKLREITEKSALNDPASLPKPILNKLIDKAINDKVWSDA
DIATYEEHKSNMQYLFNFLSKEAAAQLAELALADEANIVADKIFNGLVEGRVSKQLKEICLMDQVYVKAEDGKQSVAKYL
AEVAKANGAFTVKGYVRFETGEGLEKKNEDFAAEVAAQLQ
>Mature_359_residues
AAVTAAMVKELRESTGAGMMECKKALTETDGDMEAAVDVLRKSGAAKVEKKAGRIAAEGITRVASEGNTAVVVEVNSETD
FVAKNATFQEFVQAVADKALKASVDKAGDGEDVCAILDMQSELEEKTLTIGEKLSIRRFQKITGDCVASYIHGGGRIGVL
VAADGASNDAIKEALTNVAMQIAAMNPQYLSRNDMSADELAKLREITEKSALNDPASLPKPILNKLIDKAINDKVWSDAD
IATYEEHKSNMQYLFNFLSKEAAAQLAELALADEANIVADKIFNGLVEGRVSKQLKEICLMDQVYVKAEDGKQSVAKYLA
EVAKANGAFTVKGYVRFETGEGLEKKNEDFAAEVAAQLQ

Specific function: Associates with the EF-Tu.GDP complex and induces the exchange of GDP to GTP. It remains bound to the aminoacyl-tRNA.EF- Tu.GTP complex up to the GTP hydrolysis stage on the ribosome [H]

COG id: COG0264

COG function: function code J; Translation elongation factor Ts

Gene ontology:

Cell location: Cytoplasm [H]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the EF-Ts family [H]

Homologues:

Organism=Homo sapiens, GI291084498, Length=100, Percent_Identity=43, Blast_Score=78, Evalue=1e-14,
Organism=Homo sapiens, GI291084502, Length=100, Percent_Identity=43, Blast_Score=77, Evalue=2e-14,
Organism=Homo sapiens, GI291084500, Length=100, Percent_Identity=43, Blast_Score=77, Evalue=2e-14,
Organism=Homo sapiens, GI171846268, Length=100, Percent_Identity=43, Blast_Score=77, Evalue=2e-14,
Organism=Escherichia coli, GI1786366, Length=231, Percent_Identity=46.3203463203463, Blast_Score=177, Evalue=7e-46,
Organism=Caenorhabditis elegans, GI17561440, Length=245, Percent_Identity=27.7551020408163, Blast_Score=70, Evalue=2e-12,
Organism=Drosophila melanogaster, GI19921466, Length=219, Percent_Identity=31.0502283105023, Blast_Score=72, Evalue=5e-13,

Paralogues:

None

Copy number: 2670 Molecules/Cell In: Growth Phase, Minimal Media (Based on E. coli). 1100 Molecules/Cell In: Stationary-Phase, Rich-Media (Based on E. coli). 4173 Molecules/Cell In: Growth Phase, Glucose-minimal MOPS Media. 14563 Molecules/Cell In: Growth Phase, Gluco

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR001816
- InterPro:   IPR014039
- InterPro:   IPR018101
- InterPro:   IPR009060
- InterPro:   IPR000449 [H]

Pfam domain/function: PF00889 EF_TS; PF00627 UBA [H]

EC number: NA

Molecular weight: Translated: 38656; Mature: 38525

Theoretical pI: Translated: 4.61; Mature: 4.61

Prosite motif: PS01126 EF_TS_1 ; PS01127 EF_TS_2

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.1 %Cys     (Translated Protein)
3.1 %Met     (Translated Protein)
4.2 %Cys+Met (Translated Protein)
1.1 %Cys     (Mature Protein)
2.8 %Met     (Mature Protein)
3.9 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MAAVTAAMVKELRESTGAGMMECKKALTETDGDMEAAVDVLRKSGAAKVEKKAGRIAAEG
CCHHHHHHHHHHHHHCCCCHHHHHHHHHCCCCHHHHHHHHHHHCCCHHHHHHHHHHHHHH
ITRVASEGNTAVVVEVNSETDFVAKNATFQEFVQAVADKALKASVDKAGDGEDVCAILDM
HHHHHCCCCEEEEEEECCCCCHHCCCCCHHHHHHHHHHHHHHHHHCCCCCCCCHHHHHHH
QSELEEKTLTIGEKLSIRRFQKITGDCVASYIHGGGRIGVLVAADGASNDAIKEALTNVA
HHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHCCCCEEEEEEEECCCCHHHHHHHHHHHH
MQIAAMNPQYLSRNDMSADELAKLREITEKSALNDPASLPKPILNKLIDKAINDKVWSDA
HHHHHCCCHHHCCCCCCHHHHHHHHHHHHHHCCCCCCCCCHHHHHHHHHHHHCCCCCCCC
DIATYEEHKSNMQYLFNFLSKEAAAQLAELALADEANIVADKIFNGLVEGRVSKQLKEIC
CCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHH
LMDQVYVKAEDGKQSVAKYLAEVAKANGAFTVKGYVRFETGEGLEKKNEDFAAEVAAQLQ
HHHHHEEECCCCHHHHHHHHHHHHHCCCCEEEEEEEEEECCCCCCCCCHHHHHHHHHHCC
>Mature Secondary Structure 
AAVTAAMVKELRESTGAGMMECKKALTETDGDMEAAVDVLRKSGAAKVEKKAGRIAAEG
CHHHHHHHHHHHHHCCCCHHHHHHHHHCCCCHHHHHHHHHHHCCCHHHHHHHHHHHHHH
ITRVASEGNTAVVVEVNSETDFVAKNATFQEFVQAVADKALKASVDKAGDGEDVCAILDM
HHHHHCCCCEEEEEEECCCCCHHCCCCCHHHHHHHHHHHHHHHHHCCCCCCCCHHHHHHH
QSELEEKTLTIGEKLSIRRFQKITGDCVASYIHGGGRIGVLVAADGASNDAIKEALTNVA
HHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHCCCCEEEEEEEECCCCHHHHHHHHHHHH
MQIAAMNPQYLSRNDMSADELAKLREITEKSALNDPASLPKPILNKLIDKAINDKVWSDA
HHHHHCCCHHHCCCCCCHHHHHHHHHHHHHHCCCCCCCCCHHHHHHHHHHHHCCCCCCCC
DIATYEEHKSNMQYLFNFLSKEAAAQLAELALADEANIVADKIFNGLVEGRVSKQLKEIC
CCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHH
LMDQVYVKAEDGKQSVAKYLAEVAKANGAFTVKGYVRFETGEGLEKKNEDFAAEVAAQLQ
HHHHHEEECCCCHHHHHHHHHHHHHCCCCEEEEEEEEEECCCCCCCCCHHHHHHHHHHCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA