| Definition | Eubacterium eligens ATCC 27750 chromosome, complete genome. |
|---|---|
| Accession | NC_012778 |
| Length | 2,144,190 |
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The map label for this gene is flgE [H]
Identifier: 238916755
GI number: 238916755
Start: 832917
End: 834311
Strand: Direct
Name: flgE [H]
Synonym: EUBELI_00817
Alternate gene names: 238916755
Gene position: 832917-834311 (Clockwise)
Preceding gene: 238916754
Following gene: 238916756
Centisome position: 38.85
GC content: 37.85
Gene sequence:
>1395_bases ATGGAACGAAGCTCCTCAATATGGTGTCATCAGGATATTACATATGGGCAAATATGGAGGAACAATATTATGATGAGATC AATGTACTCTGCTGTGTCAGGTCTTAAGGCACATCAGACGAGAATGGATGTTATTGGTAACAATATCGCCAATGTTAATA CTGTGGCATTTAAGTCGCAGTCTATGACTTTTTCAGAGGTTTTTTATCAGACAACACAGACCGCTTCAGGACCTAATGCT GAATCAGGTAAGGGTGGTACTAATGCAAAACAGATCGGACTTGGTTCATCTGTAGGTTCTATATCAACATCAATCTCAAC AGAGGGTGCATCTGAGAGAACTGATAATGCATTTGATTTAAAGATAGGCGGAAGTGCTTTCTTTATTGTAAATAGTGCAG GCAATACTTTCTTTACAAGAGCTGGTAATTTTAAGGTTGATGAATCAGGCGCTCTTGTAACATCAGCTGGTGCTAATGTT ATGGGATGGCAGGTAGATGAGACAGGTAAGGCTGTTAAGGATGTTGTTTCAAAACTTTATGTGAACAGTCCGGAATTTGC GTATACATCTCCTCAAAGGACATCTGCTGTTAATTTTACTGGTAATATTAATGCAAGTTCTAAGGATACTATTACAACAA CTCTTAATTTTTATGATAGTCTTGGCAATTCTTTCCAGGCTACTGTTAATTTGGATTATGCCGGTGTACAGGGAGATAAT ACACAGTACACTATGACATGTGTAGGGGTTTCTAAGAATGGCAATCCTACAGATCTTACATTTACAGCATCCGGACCATT ATCATTTAATACACTTACAGGTCTTGCAGATCAGTCTAATGCTAATATACAGCTTACATTTTCTAATGATGCGACTTTGG CACAGACTAACGAAAATATTGATATCAGAACTATTGGAGAGAGCGAGACAAGCCCTGTACTTACACTTAGCGGTTCAGGA CTTACAATGTATGCTGATAAGACATCAATTAAGGGTAATCTTGGAATAGATGAGGTTGGAAAAGGTAAGGCTGTCGGTAA AATGACATCAGTTGGCATTGATAATTCTGGATATATTGTTGCCAGCTACAGCAATGGAGATACTAAGAATATAGGTCAGA TAGCAGTTGCTACTTTCTCTAACCCGGAAGGTCTGCAGAAAGAAGGAGAAAATCTTTACTCTGCAACACTTAATTCAGGT TCATTTGATGGTATTGGTGAAGATGTTACAACATCAGACGGCAGTATTTCATCAGGCGTACTTGAAATGTCAAATGTTGA CCTTTCATCAGAATTTACTAATATGATTACAACTCAGAGAGGATATCAGGCTAATTCGAGAATTATAACTGTTTCAGACA CACTGTTAGAGGAACTTATTAATCTTAAGAGATAA
Upstream 100 bases:
>100_bases GATGGATCAGAATAACAACAATGATAATATCTACACTAATATTGATGGAGCGGTTATTATATAGCTGGACCGAAAGGAAG CGGATGTTCCTGACTGCTTG
Downstream 100 bases:
>100_bases TTTTTAAGTATAAATGCCCCGGAATTAGATGATTTCGGGGCGTTTTTGTCTGTTTTTTCAAAGTATAACTTGCATTAATC GGTATGAAGTGCTTTAATAT
Product: flagellar hook protein FlgE
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 464; Mature: 464
Protein sequence:
>464_residues MERSSSIWCHQDITYGQIWRNNIMMRSMYSAVSGLKAHQTRMDVIGNNIANVNTVAFKSQSMTFSEVFYQTTQTASGPNA ESGKGGTNAKQIGLGSSVGSISTSISTEGASERTDNAFDLKIGGSAFFIVNSAGNTFFTRAGNFKVDESGALVTSAGANV MGWQVDETGKAVKDVVSKLYVNSPEFAYTSPQRTSAVNFTGNINASSKDTITTTLNFYDSLGNSFQATVNLDYAGVQGDN TQYTMTCVGVSKNGNPTDLTFTASGPLSFNTLTGLADQSNANIQLTFSNDATLAQTNENIDIRTIGESETSPVLTLSGSG LTMYADKTSIKGNLGIDEVGKGKAVGKMTSVGIDNSGYIVASYSNGDTKNIGQIAVATFSNPEGLQKEGENLYSATLNSG SFDGIGEDVTTSDGSISSGVLEMSNVDLSSEFTNMITTQRGYQANSRIITVSDTLLEELINLKR
Sequences:
>Translated_464_residues MERSSSIWCHQDITYGQIWRNNIMMRSMYSAVSGLKAHQTRMDVIGNNIANVNTVAFKSQSMTFSEVFYQTTQTASGPNA ESGKGGTNAKQIGLGSSVGSISTSISTEGASERTDNAFDLKIGGSAFFIVNSAGNTFFTRAGNFKVDESGALVTSAGANV MGWQVDETGKAVKDVVSKLYVNSPEFAYTSPQRTSAVNFTGNINASSKDTITTTLNFYDSLGNSFQATVNLDYAGVQGDN TQYTMTCVGVSKNGNPTDLTFTASGPLSFNTLTGLADQSNANIQLTFSNDATLAQTNENIDIRTIGESETSPVLTLSGSG LTMYADKTSIKGNLGIDEVGKGKAVGKMTSVGIDNSGYIVASYSNGDTKNIGQIAVATFSNPEGLQKEGENLYSATLNSG SFDGIGEDVTTSDGSISSGVLEMSNVDLSSEFTNMITTQRGYQANSRIITVSDTLLEELINLKR >Mature_464_residues MERSSSIWCHQDITYGQIWRNNIMMRSMYSAVSGLKAHQTRMDVIGNNIANVNTVAFKSQSMTFSEVFYQTTQTASGPNA ESGKGGTNAKQIGLGSSVGSISTSISTEGASERTDNAFDLKIGGSAFFIVNSAGNTFFTRAGNFKVDESGALVTSAGANV MGWQVDETGKAVKDVVSKLYVNSPEFAYTSPQRTSAVNFTGNINASSKDTITTTLNFYDSLGNSFQATVNLDYAGVQGDN TQYTMTCVGVSKNGNPTDLTFTASGPLSFNTLTGLADQSNANIQLTFSNDATLAQTNENIDIRTIGESETSPVLTLSGSG LTMYADKTSIKGNLGIDEVGKGKAVGKMTSVGIDNSGYIVASYSNGDTKNIGQIAVATFSNPEGLQKEGENLYSATLNSG SFDGIGEDVTTSDGSISSGVLEMSNVDLSSEFTNMITTQRGYQANSRIITVSDTLLEELINLKR
Specific function: Unknown
COG id: COG1749
COG function: function code N; Flagellar hook protein FlgE
Gene ontology:
Cell location: Bacterial flagellum basal body [H]
Metaboloic importance: Non_Essential [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the flagella basal body rod proteins family [H]
Homologues:
Organism=Escherichia coli, GI1787316, Length=454, Percent_Identity=31.4977973568282, Blast_Score=155, Evalue=7e-39, Organism=Escherichia coli, GI1787318, Length=139, Percent_Identity=38.1294964028777, Blast_Score=92, Evalue=5e-20,
Paralogues:
None
Copy number: 10-20 (rich media) [C]
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR010930 - InterPro: IPR011491 - InterPro: IPR001444 - InterPro: IPR019776 - InterPro: IPR020013 [H]
Pfam domain/function: PF06429 DUF1078; PF07559 FlaE; PF00460 Flg_bb_rod [H]
EC number: NA
Molecular weight: Translated: 49083; Mature: 49083
Theoretical pI: Translated: 4.43; Mature: 4.43
Prosite motif: PS00588 FLAGELLA_BB_ROD
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.4 %Cys (Translated Protein) 2.6 %Met (Translated Protein) 3.0 %Cys+Met (Translated Protein) 0.4 %Cys (Mature Protein) 2.6 %Met (Mature Protein) 3.0 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MERSSSIWCHQDITYGQIWRNNIMMRSMYSAVSGLKAHQTRMDVIGNNIANVNTVAFKSQ CCCCCCEEEECCCCHHHHHHCCHHHHHHHHHHHCCHHHHHHHHHHCCCCCCCEEEEEECC SMTFSEVFYQTTQTASGPNAESGKGGTNAKQIGLGSSVGSISTSISTEGASERTDNAFDL CCCHHHHHHHHHCCCCCCCCCCCCCCCCCCEEECCCCCCCCEEECCCCCCCCCCCCEEEE KIGGSAFFIVNSAGNTFFTRAGNFKVDESGALVTSAGANVMGWQVDETGKAVKDVVSKLY EECCEEEEEEECCCCEEEEECCCEEECCCCCEEEECCCCEEEEEECCCHHHHHHHHHHHH VNSPEFAYTSPQRTSAVNFTGNINASSKDTITTTLNFYDSLGNSFQATVNLDYAGVQGDN CCCCCCEECCCCCCEEEEEEECCCCCCCCEEEEEEEEHHHCCCCEEEEEEEEEECCCCCC TQYTMTCVGVSKNGNPTDLTFTASGPLSFNTLTGLADQSNANIQLTFSNDATLAQTNENI CEEEEEEEEECCCCCCCEEEEEECCCEEEHHHCCCCCCCCCEEEEEECCCCEEEECCCCE DIRTIGESETSPVLTLSGSGLTMYADKTSIKGNLGIDEVGKGKAVGKMTSVGIDNSGYIV EEEECCCCCCCCEEEEECCCEEEEECCCCCCCCCCCCCCCCCCCCCCEEEECCCCCCEEE ASYSNGDTKNIGQIAVATFSNPEGLQKEGENLYSATLNSGSFDGIGEDVTTSDGSISSGV EEECCCCCCCCCEEEEEEECCCCCHHHHCCCEEEEEECCCCCCCCCCCCCCCCCCCCCCE LEMSNVDLSSEFTNMITTQRGYQANSRIITVSDTLLEELINLKR EEECCCCCHHHHHHHHHCCCCCCCCCEEEEEEHHHHHHHHHHCC >Mature Secondary Structure MERSSSIWCHQDITYGQIWRNNIMMRSMYSAVSGLKAHQTRMDVIGNNIANVNTVAFKSQ CCCCCCEEEECCCCHHHHHHCCHHHHHHHHHHHCCHHHHHHHHHHCCCCCCCEEEEEECC SMTFSEVFYQTTQTASGPNAESGKGGTNAKQIGLGSSVGSISTSISTEGASERTDNAFDL CCCHHHHHHHHHCCCCCCCCCCCCCCCCCCEEECCCCCCCCEEECCCCCCCCCCCCEEEE KIGGSAFFIVNSAGNTFFTRAGNFKVDESGALVTSAGANVMGWQVDETGKAVKDVVSKLY EECCEEEEEEECCCCEEEEECCCEEECCCCCEEEECCCCEEEEEECCCHHHHHHHHHHHH VNSPEFAYTSPQRTSAVNFTGNINASSKDTITTTLNFYDSLGNSFQATVNLDYAGVQGDN CCCCCCEECCCCCCEEEEEEECCCCCCCCEEEEEEEEHHHCCCCEEEEEEEEEECCCCCC TQYTMTCVGVSKNGNPTDLTFTASGPLSFNTLTGLADQSNANIQLTFSNDATLAQTNENI CEEEEEEEEECCCCCCCEEEEEECCCEEEHHHCCCCCCCCCEEEEEECCCCEEEECCCCE DIRTIGESETSPVLTLSGSGLTMYADKTSIKGNLGIDEVGKGKAVGKMTSVGIDNSGYIV EEEECCCCCCCCEEEEECCCEEEEECCCCCCCCCCCCCCCCCCCCCCEEEECCCCCCEEE ASYSNGDTKNIGQIAVATFSNPEGLQKEGENLYSATLNSGSFDGIGEDVTTSDGSISSGV EEECCCCCCCCCEEEEEEECCCCCHHHHCCCEEEEEECCCCCCCCCCCCCCCCCCCCCCE LEMSNVDLSSEFTNMITTQRGYQANSRIITVSDTLLEELINLKR EEECCCCCHHHHHHHHHCCCCCCCCCEEEEEEHHHHHHHHHHCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: 9403685 [H]