| Definition | Eubacterium eligens ATCC 27750 chromosome, complete genome. |
|---|---|
| Accession | NC_012778 |
| Length | 2,144,190 |
Click here to switch to the map view.
The map label for this gene is 238916748
Identifier: 238916748
GI number: 238916748
Start: 826993
End: 827829
Strand: Direct
Name: 238916748
Synonym: EUBELI_00810
Alternate gene names: NA
Gene position: 826993-827829 (Clockwise)
Preceding gene: 238916747
Following gene: 238916749
Centisome position: 38.57
GC content: 35.24
Gene sequence:
>837_bases TTGTCTAATCTGTTAAAAAAAGACACTATAATTAATAATGATGAGAGAGTTATTGATTATAATGAGCTTATCAGGAAAAA GATGCAGTCTATAATGAAGTCCAGAAATAATGAAATGGATGCAGATGGTTTTATTAGTGGTCTGCATGCTGATATTGTAG AAGAACTTATATCGGATGATAATACAGCAGATTCACGTACAGATGATTCATCAGAGGGAGAACATCAGGCTGCCGCATCA TTGGAAAATATTAATGCAGAAGCTGAAAAAATAATAGAAGATGCAAGACTTCAGGCTGAACAGATAATAGCAGATGCCAA TAAAAATGCGGCTGCTGCATTTGAAGAGGCTAAACAGAATGGCTACTATGAGGGTAATGCGGCTGCACAGGAAGAGGCAG ACAAAAAGCAGGAACAGCTTGAAGCAGAATATAATAACAGGAAGAAAGAGCTGGAGCAGGAATATAATGATCTTAAAGAA AAGGTAGAGCCACAGCTTGTTGAAGTTATTACTGATGTGTTCAGGAAAGTAACGGGAGTTGTTGCAGAAGATAATCAGCA GATTATTTTGCATCTTATCAATGATGTTATGCATAATGCTGATGGAAGCAGGGATTATGTAATAAAAGTATCTCCTGAAG ATTATAAGTTCCTGGTTAATAATCAGGGAAAGATATATTGTGCTATGTCAAGAGAGGTTAATATTGATATAGTTGAGGAT ACCGGACTTGAAAGAAATCAGTGCATGATAGAAACAAATACTGGAATATTTAATTGCAGTCTGGATATTGAACTTAACAA TCTTATAAAAAATATAAAGCTGTTAAGCTGTGTGTAG
Upstream 100 bases:
>100_bases AAAGATGTTGAAGATGCACAGCAGAAGATTGTTAATATTATCAGAAAGCTTGAAGATTCAGCAGAAATTGTAATATCACG AGGCGGAGGTGACGAGATAA
Downstream 100 bases:
>100_bases TGACTGAGATTATATATTATTTGATATAAGGAGGATGAAATGCTGGCAATTAATAAAAATAAATATTTATCATTGACAGA AAAATCCTTCTATAAAAAGT
Product: flagellar assembly protein FliH
Products: NA
Alternate protein names: Flagellar Biosynthesis/Type III Secretory Pathway Protein
Number of amino acids: Translated: 278; Mature: 277
Protein sequence:
>278_residues MSNLLKKDTIINNDERVIDYNELIRKKMQSIMKSRNNEMDADGFISGLHADIVEELISDDNTADSRTDDSSEGEHQAAAS LENINAEAEKIIEDARLQAEQIIADANKNAAAAFEEAKQNGYYEGNAAAQEEADKKQEQLEAEYNNRKKELEQEYNDLKE KVEPQLVEVITDVFRKVTGVVAEDNQQIILHLINDVMHNADGSRDYVIKVSPEDYKFLVNNQGKIYCAMSREVNIDIVED TGLERNQCMIETNTGIFNCSLDIELNNLIKNIKLLSCV
Sequences:
>Translated_278_residues MSNLLKKDTIINNDERVIDYNELIRKKMQSIMKSRNNEMDADGFISGLHADIVEELISDDNTADSRTDDSSEGEHQAAAS LENINAEAEKIIEDARLQAEQIIADANKNAAAAFEEAKQNGYYEGNAAAQEEADKKQEQLEAEYNNRKKELEQEYNDLKE KVEPQLVEVITDVFRKVTGVVAEDNQQIILHLINDVMHNADGSRDYVIKVSPEDYKFLVNNQGKIYCAMSREVNIDIVED TGLERNQCMIETNTGIFNCSLDIELNNLIKNIKLLSCV >Mature_277_residues SNLLKKDTIINNDERVIDYNELIRKKMQSIMKSRNNEMDADGFISGLHADIVEELISDDNTADSRTDDSSEGEHQAAASL ENINAEAEKIIEDARLQAEQIIADANKNAAAAFEEAKQNGYYEGNAAAQEEADKKQEQLEAEYNNRKKELEQEYNDLKEK VEPQLVEVITDVFRKVTGVVAEDNQQIILHLINDVMHNADGSRDYVIKVSPEDYKFLVNNQGKIYCAMSREVNIDIVEDT GLERNQCMIETNTGIFNCSLDIELNNLIKNIKLLSCV
Specific function: Unknown
COG id: COG1317
COG function: function code NU; Flagellar biosynthesis/type III secretory pathway protein
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 31437; Mature: 31306
Theoretical pI: Translated: 4.19; Mature: 4.19
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.4 %Cys (Translated Protein) 2.5 %Met (Translated Protein) 4.0 %Cys+Met (Translated Protein) 1.4 %Cys (Mature Protein) 2.2 %Met (Mature Protein) 3.6 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MSNLLKKDTIINNDERVIDYNELIRKKMQSIMKSRNNEMDADGFISGLHADIVEELISDD CCCHHHHCCEECCCCCEECHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHCCC NTADSRTDDSSEGEHQAAASLENINAEAEKIIEDARLQAEQIIADANKNAAAAFEEAKQN CCCCCCCCCCCCCHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHC GYYEGNAAAQEEADKKQEQLEAEYNNRKKELEQEYNDLKEKVEPQLVEVITDVFRKVTGV CCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH VAEDNQQIILHLINDVMHNADGSRDYVIKVSPEDYKFLVNNQGKIYCAMSREVNIDIVED HCCCCHHHHHHHHHHHHHCCCCCCEEEEEECCCCEEEEECCCCEEEEEECCCCEEEEECC TGLERNQCMIETNTGIFNCSLDIELNNLIKNIKLLSCV CCCCCCCEEEEECCCEEEEEEEEEHHHHHHHHHHHHCC >Mature Secondary Structure SNLLKKDTIINNDERVIDYNELIRKKMQSIMKSRNNEMDADGFISGLHADIVEELISDD CCHHHHCCEECCCCCEECHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHCCC NTADSRTDDSSEGEHQAAASLENINAEAEKIIEDARLQAEQIIADANKNAAAAFEEAKQN CCCCCCCCCCCCCHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHC GYYEGNAAAQEEADKKQEQLEAEYNNRKKELEQEYNDLKEKVEPQLVEVITDVFRKVTGV CCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH VAEDNQQIILHLINDVMHNADGSRDYVIKVSPEDYKFLVNNQGKIYCAMSREVNIDIVED HCCCCHHHHHHHHHHHHHCCCCCCEEEEEECCCCEEEEECCCCEEEEEECCCCEEEEECC TGLERNQCMIETNTGIFNCSLDIELNNLIKNIKLLSCV CCCCCCCEEEEECCCEEEEEEEEEHHHHHHHHHHHHCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA