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The map label for this gene is flgC [H]

Identifier: 238916744

GI number: 238916744

Start: 823421

End: 823915

Strand: Direct

Name: flgC [H]

Synonym: EUBELI_00806

Alternate gene names: 238916744

Gene position: 823421-823915 (Clockwise)

Preceding gene: 238916743

Following gene: 238916745

Centisome position: 38.4

GC content: 39.39

Gene sequence:

>495_bases
ATGTTTACGGCTTTTAATGTAAGTGCTTCAGGAATGACGGCACAGCAGTTAAGAACAGATGTAATATCAGAGAATATAGC
TAATGCAGATACAACAAGAACAAGTGATGGAACACCTTATGTTAGGAAAGCTGTTGTGTTCACTGAAAAAACAATGACAG
GTACAGCACTTGGAAAGTCTGCATATGGTTCATATGGAACCGGAGCGTATTCCACATTTTCGGATGCGTTAAGACTTGCC
AATGGTGGTGTTGTAGGTAACGGAGTTAAAGTTACATCTGTATATGAAGATACATCAACTGATATGGAAATGGTATATGA
TCCATCGCATCCAGATGCGGATGAGAATGGCTATGTTACATATCCGAATGTTAATACTGTTCAGGAAATGACTGACCTGA
TAGATGCGTCGCGTTCATACGAAGCTAATATATCAGCTTTCAACGCAAGCAAGTCAATGGCAACAAAGGGACTTTCAATA
GGTTCTTCAACATAA

Upstream 100 bases:

>100_bases
AATTATAATGCGTTAATTGACAGCATGAATAATGAGTTTTCAAGATTTAAGTCTGTGTTAAAATAATTGATGGATTCAGG
AGGAAAATCAGCTTATGTCA

Downstream 100 bases:

>100_bases
AGTGGATAATAATAACATATTAACTGAAAGAGGAGAATGAATATGGATCTTACTAGTGCGATTGGAACTTTAGGCAGTGA
TTATGTCAATAAAGTTACAT

Product: flagellar basal-body rod protein FlgC

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 164; Mature: 164

Protein sequence:

>164_residues
MFTAFNVSASGMTAQQLRTDVISENIANADTTRTSDGTPYVRKAVVFTEKTMTGTALGKSAYGSYGTGAYSTFSDALRLA
NGGVVGNGVKVTSVYEDTSTDMEMVYDPSHPDADENGYVTYPNVNTVQEMTDLIDASRSYEANISAFNASKSMATKGLSI
GSST

Sequences:

>Translated_164_residues
MFTAFNVSASGMTAQQLRTDVISENIANADTTRTSDGTPYVRKAVVFTEKTMTGTALGKSAYGSYGTGAYSTFSDALRLA
NGGVVGNGVKVTSVYEDTSTDMEMVYDPSHPDADENGYVTYPNVNTVQEMTDLIDASRSYEANISAFNASKSMATKGLSI
GSST
>Mature_164_residues
MFTAFNVSASGMTAQQLRTDVISENIANADTTRTSDGTPYVRKAVVFTEKTMTGTALGKSAYGSYGTGAYSTFSDALRLA
NGGVVGNGVKVTSVYEDTSTDMEMVYDPSHPDADENGYVTYPNVNTVQEMTDLIDASRSYEANISAFNASKSMATKGLSI
GSST

Specific function: Unknown

COG id: COG1558

COG function: function code N; Flagellar basal body rod protein

Gene ontology:

Cell location: Bacterial flagellum basal body [H]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the flagella basal body rod proteins family [H]

Homologues:

Organism=Escherichia coli, GI1787314, Length=162, Percent_Identity=36.4197530864198, Blast_Score=102, Evalue=1e-23,

Paralogues:

None

Copy number: 10-20 (rich media) [C]

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR010930
- InterPro:   IPR001444
- InterPro:   IPR019776
- InterPro:   IPR006299 [H]

Pfam domain/function: PF06429 DUF1078; PF00460 Flg_bb_rod [H]

EC number: NA

Molecular weight: Translated: 17329; Mature: 17329

Theoretical pI: Translated: 4.30; Mature: 4.30

Prosite motif: PS00588 FLAGELLA_BB_ROD

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
4.3 %Met     (Translated Protein)
4.3 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
4.3 %Met     (Mature Protein)
4.3 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MFTAFNVSASGMTAQQLRTDVISENIANADTTRTSDGTPYVRKAVVFTEKTMTGTALGKS
CCEEEECCCCCCCHHHHHHHHHHHHCCCCCCCCCCCCCHHHEEEEEEECCCCCCCCCCCC
AYGSYGTGAYSTFSDALRLANGGVVGNGVKVTSVYEDTSTDMEMVYDPSHPDADENGYVT
CCCCCCCCCHHHHHHHHHHHCCCEECCCEEEEEEECCCCCCEEEEECCCCCCCCCCCEEE
YPNVNTVQEMTDLIDASRSYEANISAFNASKSMATKGLSIGSST
CCCCCHHHHHHHHHHCCCCCCCCEEEECCCHHHHHCCCCCCCCC
>Mature Secondary Structure
MFTAFNVSASGMTAQQLRTDVISENIANADTTRTSDGTPYVRKAVVFTEKTMTGTALGKS
CCEEEECCCCCCCHHHHHHHHHHHHCCCCCCCCCCCCCHHHEEEEEEECCCCCCCCCCCC
AYGSYGTGAYSTFSDALRLANGGVVGNGVKVTSVYEDTSTDMEMVYDPSHPDADENGYVT
CCCCCCCCCHHHHHHHHHHHCCCEECCCEEEEEEECCCCCCEEEEECCCCCCCCCCCEEE
YPNVNTVQEMTDLIDASRSYEANISAFNASKSMATKGLSIGSST
CCCCCHHHHHHHHHHCCCCCCCCEEEECCCHHHHHCCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 9403685 [H]