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The map label for this gene is rpe [H]

Identifier: 238916661

GI number: 238916661

Start: 726957

End: 727625

Strand: Direct

Name: rpe [H]

Synonym: EUBELI_00723

Alternate gene names: 238916661

Gene position: 726957-727625 (Clockwise)

Preceding gene: 238916660

Following gene: 238916663

Centisome position: 33.9

GC content: 36.47

Gene sequence:

>669_bases
ATGAGTGATTTGAAAAAAATTTTGTCACCATCAATATTATCGGCAGACTTCAAGAAATTAGGAGAAGAGCTTGAAACAAT
TGATAAGGCAGGAGCTGAATATGTTCATGTAGATGTTATGGATGGACTTTTTGTAAAGAGTATTTCATTCGGAATGCCGG
TTATTAAGTCAGCAAGAAGTGCAACTGACAAGGTTTTTGATGTACATCTTATGATTGAAGAGCCTATAAGATATATAGAA
GACTTTGTTAAGGCAGGCGCTGATATAATTACAGTACATGTTGAAGCGTGTAAGGATGTTGTTGCTACATTAGAAAAGAT
TAAGGAATGTGGTGTAAAAGCAGCTATAACACTTAATCCTCCGACACCGGTATCAGCAATTGAGCCTTATCTTGATAAGG
TAGATATGGTTCTTGTAATGAGCGTTAATCCGGGATTTGGGGGACAGAAGTTTATACCGGAATCACTTGATAAAGTAAAA
GAAATAAGAAGTTTATTAGATGCTAAAGGACTTGATACAGATATTGAGATTGATGGTGGGGTGAATGCTGGAAATCTTGC
ATCAGTTCTTGAGGCAGGTGCTAATGTAATAGTAGCAGGTTCAGCAATATTTTCTGGAGATGTAGCTGATAATGTTAAGA
AGTTTAAAGAAATAATGGGCGCGTGGTAA

Upstream 100 bases:

>100_bases
TATTAATTATGACAGATACAAGTCATATACAGATATATTTGAAGAAATAAAGAACAAGAAGAAGTACTAGAAGTACTTGC
AAACAGAAAGGTTGTTAAAT

Downstream 100 bases:

>100_bases
AACCACACGCCCATTAATATTATACATTGAATCTGAAAAGGATTACATCACCATCTTTAACGACATATTCTTTGCCTTCC
ATTCTTACAAGACCTTTCTC

Product: ribulose-phosphate 3-epimerase

Products: NA

Alternate protein names: Pentose-5-phosphate 3-epimerase; PPE; R5P3E [H]

Number of amino acids: Translated: 222; Mature: 221

Protein sequence:

>222_residues
MSDLKKILSPSILSADFKKLGEELETIDKAGAEYVHVDVMDGLFVKSISFGMPVIKSARSATDKVFDVHLMIEEPIRYIE
DFVKAGADIITVHVEACKDVVATLEKIKECGVKAAITLNPPTPVSAIEPYLDKVDMVLVMSVNPGFGGQKFIPESLDKVK
EIRSLLDAKGLDTDIEIDGGVNAGNLASVLEAGANVIVAGSAIFSGDVADNVKKFKEIMGAW

Sequences:

>Translated_222_residues
MSDLKKILSPSILSADFKKLGEELETIDKAGAEYVHVDVMDGLFVKSISFGMPVIKSARSATDKVFDVHLMIEEPIRYIE
DFVKAGADIITVHVEACKDVVATLEKIKECGVKAAITLNPPTPVSAIEPYLDKVDMVLVMSVNPGFGGQKFIPESLDKVK
EIRSLLDAKGLDTDIEIDGGVNAGNLASVLEAGANVIVAGSAIFSGDVADNVKKFKEIMGAW
>Mature_221_residues
SDLKKILSPSILSADFKKLGEELETIDKAGAEYVHVDVMDGLFVKSISFGMPVIKSARSATDKVFDVHLMIEEPIRYIED
FVKAGADIITVHVEACKDVVATLEKIKECGVKAAITLNPPTPVSAIEPYLDKVDMVLVMSVNPGFGGQKFIPESLDKVKE
IRSLLDAKGLDTDIEIDGGVNAGNLASVLEAGANVIVAGSAIFSGDVADNVKKFKEIMGAW

Specific function: Unknown

COG id: COG0036

COG function: function code G; Pentose-5-phosphate-3-epimerase

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the ribulose-phosphate 3-epimerase family [H]

Homologues:

Organism=Homo sapiens, GI40385883, Length=202, Percent_Identity=41.0891089108911, Blast_Score=167, Evalue=5e-42,
Organism=Homo sapiens, GI219879828, Length=202, Percent_Identity=38.6138613861386, Blast_Score=155, Evalue=3e-38,
Organism=Homo sapiens, GI24307923, Length=158, Percent_Identity=34.1772151898734, Blast_Score=102, Evalue=2e-22,
Organism=Escherichia coli, GI1789788, Length=201, Percent_Identity=48.7562189054726, Blast_Score=195, Evalue=2e-51,
Organism=Escherichia coli, GI1790523, Length=216, Percent_Identity=37.5, Blast_Score=159, Evalue=1e-40,
Organism=Escherichia coli, GI1790754, Length=213, Percent_Identity=29.5774647887324, Blast_Score=109, Evalue=2e-25,
Organism=Caenorhabditis elegans, GI17552948, Length=205, Percent_Identity=41.4634146341463, Blast_Score=161, Evalue=3e-40,
Organism=Saccharomyces cerevisiae, GI6322341, Length=228, Percent_Identity=40.7894736842105, Blast_Score=169, Evalue=3e-43,
Organism=Drosophila melanogaster, GI24586301, Length=217, Percent_Identity=38.7096774193548, Blast_Score=168, Evalue=3e-42,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR013785
- InterPro:   IPR000056
- InterPro:   IPR011060 [H]

Pfam domain/function: PF00834 Ribul_P_3_epim [H]

EC number: =5.1.3.1 [H]

Molecular weight: Translated: 23796; Mature: 23665

Theoretical pI: Translated: 4.53; Mature: 4.53

Prosite motif: PS01086 RIBUL_P_3_EPIMER_2

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.9 %Cys     (Translated Protein)
3.2 %Met     (Translated Protein)
4.1 %Cys+Met (Translated Protein)
0.9 %Cys     (Mature Protein)
2.7 %Met     (Mature Protein)
3.6 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MSDLKKILSPSILSADFKKLGEELETIDKAGAEYVHVDVMDGLFVKSISFGMPVIKSARS
CCHHHHHHCCHHHHHHHHHHHHHHHHHHHCCCCEEEEEHHHHHHHHHHHHCCHHHHHHHH
ATDKVFDVHLMIEEPIRYIEDFVKAGADIITVHVEACKDVVATLEKIKECGVKAAITLNP
HHHHHHHEEHHHHHHHHHHHHHHHCCCCEEEEEHHHHHHHHHHHHHHHHCCCEEEEEECC
PTPVSAIEPYLDKVDMVLVMSVNPGFGGQKFIPESLDKVKEIRSLLDAKGLDTDIEIDGG
CCCHHHHHHHHHCCCEEEEEEECCCCCCCCCCHHHHHHHHHHHHHHHHCCCCCCEEECCC
VNAGNLASVLEAGANVIVAGSAIFSGDVADNVKKFKEIMGAW
CCCHHHHHHHHCCCCEEEECCHHHCCHHHHHHHHHHHHHCCC
>Mature Secondary Structure 
SDLKKILSPSILSADFKKLGEELETIDKAGAEYVHVDVMDGLFVKSISFGMPVIKSARS
CHHHHHHCCHHHHHHHHHHHHHHHHHHHCCCCEEEEEHHHHHHHHHHHHCCHHHHHHHH
ATDKVFDVHLMIEEPIRYIEDFVKAGADIITVHVEACKDVVATLEKIKECGVKAAITLNP
HHHHHHHEEHHHHHHHHHHHHHHHCCCCEEEEEHHHHHHHHHHHHHHHHCCCEEEEEECC
PTPVSAIEPYLDKVDMVLVMSVNPGFGGQKFIPESLDKVKEIRSLLDAKGLDTDIEIDGG
CCCHHHHHHHHHCCCEEEEEEECCCCCCCCCCHHHHHHHHHHHHHHHHCCCCCCEEECCC
VNAGNLASVLEAGANVIVAGSAIFSGDVADNVKKFKEIMGAW
CCCHHHHHHHHCCCCEEEECCHHHCCHHHHHHHHHHHHHCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 8905231; 9298645 [H]