| Definition | Eubacterium eligens ATCC 27750 chromosome, complete genome. |
|---|---|
| Accession | NC_012778 |
| Length | 2,144,190 |
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The map label for this gene is 238916629
Identifier: 238916629
GI number: 238916629
Start: 686229
End: 687395
Strand: Direct
Name: 238916629
Synonym: EUBELI_00686
Alternate gene names: NA
Gene position: 686229-687395 (Clockwise)
Preceding gene: 238916628
Following gene: 238916630
Centisome position: 32.0
GC content: 38.39
Gene sequence:
>1167_bases GTGGCAAAAAGAAAGAATAATATTGACGATATAGATATCGTTGATGATTTTGAACTTGAAGATATTGATGATTTTGATCC GTTTGATGTTTTAGATGACAGCTATGAAGATGAAAAGTCGTATGGTAACGATAAGCCACAGGGTGGCAATACATCTAATA GAAGAAATAAAAATAAAAAGAAGAATCCAGTTCTTGTATGGGCAGGAAGAGTCGGTGCGACACTTTTGTCAACTATTCTT ATTCTGGTGATATTTCTGTATGCTGTTATGGCAATGCTTGTGTATGGACCATCTAAGACAGCAAAGATTCAGTTTGTACT TTCTGTACAGGAGACAAGTGCAATAGGATTTCTTGCTAACTGGTTCTGCTCTCAGGATGAGATAGACCAGATTAAGGCCA ATAACGCAATTAAAGATACAGATGAGATAACAGATGCGGGACTTGTAAATATTGATACAGCAGCCCAGGATCCAGAAACT CCTGATATTGAGATTGTGGACGTAAAGGGCGCTACATATTCTGGAAAACTCATGATTGTAAAAGATCCAAGCAGATTATT TGTGGGAACAGTTCCTGAATTTACCAATGGAAATGGAATGGTTGTTGCAGATATTGCAAAGAGATATGATGCAATCGGCG GAGTTAATGGCGGAGAATTTGTTGATGGGGAAACAACTTATACAGCAATGCCGATTGGTCTTGTAATGAAAGACGGAGAG ATTCTTAATGATAATGGCGGAACATCTCATGTTACCGGAATTACATTTGATAATAAGCTTGTTCTTGGTAATATGAATGC TGCAAAGGCAAAGGAACTTAATATAAGAGACTGCGTAAGCATAAGCAATCATATTGGTCCATTTCTTATTGTTAATGGAG AGGCTCAGGATATTGTTGGTATTGCAGGGGGAACTAATCCAAGAACTGCCATAGGACAGACAGCAGATGGAAAGATTCTT CTTCTTGCAGTAGATGGAAGACAGCCTAACAGTATAGGTGCTACATTTTCAGACCTACAGGATATTATGGCACAGTATGG AGCTGTAAATGCATCTACAATGGACGGTGGAACATCAACACAGATGTATTATGATGGGGAAGTAATAAATGTACCATATT CACCAACAGGCCCAAGAAGCTGTCCGACAGCATTTTTAATTAAGTAA
Upstream 100 bases:
>100_bases CAGGAATTGCCAAGATAATAATTGATCTTGCATTGTTCTTTGTAAGTTATCAGATTCAGAAAAGATGGGTTTTTAAGTAA CGGTTTAGGAGGAAGTTATA
Downstream 100 bases:
>100_bases GGAGGAGAGTAGTATGCCAAGAAATAATAAAAGAAAAAAGAAGCTTTCAAATTTTAAAAAATTCTTATGTATATACTGTG GAATTCTTCTTCTTGCAGGT
Product: hypothetical protein
Products: NA
Alternate protein names: Gram-Positive Signal Peptide YSIRK Family; LPXTG-Motif Cell Wall Anchor Domain Protein; Exopolysaccharide Biosynthesis Related Protein; Peptidase; Copper Amine Oxidase Domain Protein; Copper Amine Oxidase Domain-Containing Protein
Number of amino acids: Translated: 388; Mature: 387
Protein sequence:
>388_residues MAKRKNNIDDIDIVDDFELEDIDDFDPFDVLDDSYEDEKSYGNDKPQGGNTSNRRNKNKKKNPVLVWAGRVGATLLSTIL ILVIFLYAVMAMLVYGPSKTAKIQFVLSVQETSAIGFLANWFCSQDEIDQIKANNAIKDTDEITDAGLVNIDTAAQDPET PDIEIVDVKGATYSGKLMIVKDPSRLFVGTVPEFTNGNGMVVADIAKRYDAIGGVNGGEFVDGETTYTAMPIGLVMKDGE ILNDNGGTSHVTGITFDNKLVLGNMNAAKAKELNIRDCVSISNHIGPFLIVNGEAQDIVGIAGGTNPRTAIGQTADGKIL LLAVDGRQPNSIGATFSDLQDIMAQYGAVNASTMDGGTSTQMYYDGEVINVPYSPTGPRSCPTAFLIK
Sequences:
>Translated_388_residues MAKRKNNIDDIDIVDDFELEDIDDFDPFDVLDDSYEDEKSYGNDKPQGGNTSNRRNKNKKKNPVLVWAGRVGATLLSTIL ILVIFLYAVMAMLVYGPSKTAKIQFVLSVQETSAIGFLANWFCSQDEIDQIKANNAIKDTDEITDAGLVNIDTAAQDPET PDIEIVDVKGATYSGKLMIVKDPSRLFVGTVPEFTNGNGMVVADIAKRYDAIGGVNGGEFVDGETTYTAMPIGLVMKDGE ILNDNGGTSHVTGITFDNKLVLGNMNAAKAKELNIRDCVSISNHIGPFLIVNGEAQDIVGIAGGTNPRTAIGQTADGKIL LLAVDGRQPNSIGATFSDLQDIMAQYGAVNASTMDGGTSTQMYYDGEVINVPYSPTGPRSCPTAFLIK >Mature_387_residues AKRKNNIDDIDIVDDFELEDIDDFDPFDVLDDSYEDEKSYGNDKPQGGNTSNRRNKNKKKNPVLVWAGRVGATLLSTILI LVIFLYAVMAMLVYGPSKTAKIQFVLSVQETSAIGFLANWFCSQDEIDQIKANNAIKDTDEITDAGLVNIDTAAQDPETP DIEIVDVKGATYSGKLMIVKDPSRLFVGTVPEFTNGNGMVVADIAKRYDAIGGVNGGEFVDGETTYTAMPIGLVMKDGEI LNDNGGTSHVTGITFDNKLVLGNMNAAKAKELNIRDCVSISNHIGPFLIVNGEAQDIVGIAGGTNPRTAIGQTADGKILL LAVDGRQPNSIGATFSDLQDIMAQYGAVNASTMDGGTSTQMYYDGEVINVPYSPTGPRSCPTAFLIK
Specific function: Unknown
COG id: COG4632
COG function: function code G; Exopolysaccharide biosynthesis protein related to N-acetylglucosamine-1-phosphodiester alpha-N-acetylglucosaminidase
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 41672; Mature: 41541
Theoretical pI: Translated: 4.20; Mature: 4.20
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.8 %Cys (Translated Protein) 2.8 %Met (Translated Protein) 3.6 %Cys+Met (Translated Protein) 0.8 %Cys (Mature Protein) 2.6 %Met (Mature Protein) 3.4 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MAKRKNNIDDIDIVDDFELEDIDDFDPFDVLDDSYEDEKSYGNDKPQGGNTSNRRNKNKK CCCCCCCCCCEEEECCCCCCCCCCCCCHHHCCCCCCHHHHCCCCCCCCCCCCCCCCCCCC KNPVLVWAGRVGATLLSTILILVIFLYAVMAMLVYGPSKTAKIQFVLSVQETSAIGFLAN CCCEEEEECCHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCEEEEEEEEECCCCHHHHHHH WFCSQDEIDQIKANNAIKDTDEITDAGLVNIDTAAQDPETPDIEIVDVKGATYSGKLMIV HHCCCHHHHHHHCCCCCCCCHHHCCCCEEEECCCCCCCCCCCEEEEEECCCCCCCEEEEE KDPSRLFVGTVPEFTNGNGMVVADIAKRYDAIGGVNGGEFVDGETTYTAMPIGLVMKDGE ECCCEEEEECCCCEECCCCEEEEHHHHHHHHHCCCCCCCEECCCCEEEEEEEEEEEECCE ILNDNGGTSHVTGITFDNKLVLGNMNAAKAKELNIRDCVSISNHIGPFLIVNGEAQDIVG EECCCCCCCEEEEEEECCEEEEECCCCCCHHCCCHHHHHHHHHCCCCEEEECCCCCEEEE IAGGTNPRTAIGQTADGKILLLAVDGRQPNSIGATFSDLQDIMAQYGAVNASTMDGGTST ECCCCCCCCCCCCCCCCEEEEEEECCCCCCCCCCCHHHHHHHHHHHCCCCCEECCCCCCE QMYYDGEVINVPYSPTGPRSCPTAFLIK EEEECCEEEECCCCCCCCCCCCEEEEEC >Mature Secondary Structure AKRKNNIDDIDIVDDFELEDIDDFDPFDVLDDSYEDEKSYGNDKPQGGNTSNRRNKNKK CCCCCCCCCEEEECCCCCCCCCCCCCHHHCCCCCCHHHHCCCCCCCCCCCCCCCCCCCC KNPVLVWAGRVGATLLSTILILVIFLYAVMAMLVYGPSKTAKIQFVLSVQETSAIGFLAN CCCEEEEECCHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCEEEEEEEEECCCCHHHHHHH WFCSQDEIDQIKANNAIKDTDEITDAGLVNIDTAAQDPETPDIEIVDVKGATYSGKLMIV HHCCCHHHHHHHCCCCCCCCHHHCCCCEEEECCCCCCCCCCCEEEEEECCCCCCCEEEEE KDPSRLFVGTVPEFTNGNGMVVADIAKRYDAIGGVNGGEFVDGETTYTAMPIGLVMKDGE ECCCEEEEECCCCEECCCCEEEEHHHHHHHHHCCCCCCCEECCCCEEEEEEEEEEEECCE ILNDNGGTSHVTGITFDNKLVLGNMNAAKAKELNIRDCVSISNHIGPFLIVNGEAQDIVG EECCCCCCCEEEEEEECCEEEEECCCCCCHHCCCHHHHHHHHHCCCCEEEECCCCCEEEE IAGGTNPRTAIGQTADGKILLLAVDGRQPNSIGATFSDLQDIMAQYGAVNASTMDGGTST ECCCCCCCCCCCCCCCCEEEEEEECCCCCCCCCCCHHHHHHHHHHHCCCCCEECCCCCCE QMYYDGEVINVPYSPTGPRSCPTAFLIK EEEECCEEEECCCCCCCCCCCCEEEEEC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: NA