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The map label for this gene is yteR [H]

Identifier: 238916612

GI number: 238916612

Start: 668413

End: 669558

Strand: Direct

Name: yteR [H]

Synonym: EUBELI_00669

Alternate gene names: 238916612

Gene position: 668413-669558 (Clockwise)

Preceding gene: 238916610

Following gene: 238916613

Centisome position: 31.17

GC content: 37.26

Gene sequence:

>1146_bases
ATGGACGCAGTAGTAAAGTATATTGACGGACTTCTGGAAAAAAGCACACCAGATGCTCCTGTATGGAACATTGAAAAGAT
TAAGCAGGGCCTTAAGTCAAAGTGGAACTATATTGATGGCTGTATGATTAAAGCAGTTCTTCAGATGTATGACTTAACCA
AGGATGAAAAGTATCTTAAGTTTGCAGATGATTTTATAGATTACAGAGTCTTTGAAGATGGTACAATAGATGGCTACAGC
ATTGGTGAGAAGAATATTGATAATGTTAATGCTGGTAAGACTTTATTTGAATTATATGATCTTACAGGTAAGGAAAAGTA
TAAGAAGGCAGCAGATTTAGTATATTCACAGATAGAGATTATGCCTAGATGCCAGAATGAAGCAAGAAGCTTCTGGCATA
AGGATATATATCCTAATCAGGTATGGCTTGATGGTCTTTATATGGGACTTCCATTCTATCTTGAATATGAGACAAGATAC
AATGACAGAAAGAATTACTCTGATATTTTCGGACAGTTCAAGTTCGTAATTGAGAATATGAGGAATCCTATTAACGGACT
TTATTTCCATGCAATGGATACAAGCAGGGAAGCATTCTGGTGTGATAAGGTTACAGGTTTATCACAGCACAGCTGGTTAA
GAGCTATTGGCTGGTATACAATGGCGCTTATTGATACACTTGATCAGGTTGATAATAAGGACCATAAGTATGATGCTGAA
TGCAAGATGCTTGAGGATGCATTTAAGGATCTTGTCGATTCAATGCTTAAGTATCAGGATGAGAGTGGTATGTGGTATCA
GGTAGTTAATTATGGTGGTATGGATAAGAACTATCTTGAGACAAGCGGAAGTTCAATTATGGCATATGCACTTCTTAAGG
CTATACGTCTTGGATATCTTTCTGATGATTACGCACAGTATGCCAAGAAAGCAATTGATGGCATCTGTGAAAGATACCTT
AAGACTAATGAAGATGGTTCATTATCACTCGGTGGTATCTGTCTTGTTGCAGGACTTGGTGGTAATGGAAGAAGACCTGG
TACATATGACTATTATATGTCAGAGCCAATCGTAGAAGATGATGCCAAGGGTGTAGGACCATTCCTTCTTGCATATACAG
AGCTTTTAAGATACGAGAATAAATAA

Upstream 100 bases:

>100_bases
TGGGTTGCTTAAAGGCATTTTTTAGTGTACAATTTCTATAAAATATGGGCGGAATTGATATATATGTTTCCCCATATAAG
TTGACAAGGAGACAGAAATA

Downstream 100 bases:

>100_bases
CAGGCAGAATAGAGAACATAATAAAACGGGGTCTTACAGCATATGTCTGGGACTCCGTTTTTTATATATCTGAAGGAGAT
TAATTATGAAGAAACCATAT

Product: glycoside hydrolase family 105-like unsaturated rhamnogalacturonyl hydrolase

Products: NA

Alternate protein names: URH [H]

Number of amino acids: Translated: 381; Mature: 381

Protein sequence:

>381_residues
MDAVVKYIDGLLEKSTPDAPVWNIEKIKQGLKSKWNYIDGCMIKAVLQMYDLTKDEKYLKFADDFIDYRVFEDGTIDGYS
IGEKNIDNVNAGKTLFELYDLTGKEKYKKAADLVYSQIEIMPRCQNEARSFWHKDIYPNQVWLDGLYMGLPFYLEYETRY
NDRKNYSDIFGQFKFVIENMRNPINGLYFHAMDTSREAFWCDKVTGLSQHSWLRAIGWYTMALIDTLDQVDNKDHKYDAE
CKMLEDAFKDLVDSMLKYQDESGMWYQVVNYGGMDKNYLETSGSSIMAYALLKAIRLGYLSDDYAQYAKKAIDGICERYL
KTNEDGSLSLGGICLVAGLGGNGRRPGTYDYYMSEPIVEDDAKGVGPFLLAYTELLRYENK

Sequences:

>Translated_381_residues
MDAVVKYIDGLLEKSTPDAPVWNIEKIKQGLKSKWNYIDGCMIKAVLQMYDLTKDEKYLKFADDFIDYRVFEDGTIDGYS
IGEKNIDNVNAGKTLFELYDLTGKEKYKKAADLVYSQIEIMPRCQNEARSFWHKDIYPNQVWLDGLYMGLPFYLEYETRY
NDRKNYSDIFGQFKFVIENMRNPINGLYFHAMDTSREAFWCDKVTGLSQHSWLRAIGWYTMALIDTLDQVDNKDHKYDAE
CKMLEDAFKDLVDSMLKYQDESGMWYQVVNYGGMDKNYLETSGSSIMAYALLKAIRLGYLSDDYAQYAKKAIDGICERYL
KTNEDGSLSLGGICLVAGLGGNGRRPGTYDYYMSEPIVEDDAKGVGPFLLAYTELLRYENK
>Mature_381_residues
MDAVVKYIDGLLEKSTPDAPVWNIEKIKQGLKSKWNYIDGCMIKAVLQMYDLTKDEKYLKFADDFIDYRVFEDGTIDGYS
IGEKNIDNVNAGKTLFELYDLTGKEKYKKAADLVYSQIEIMPRCQNEARSFWHKDIYPNQVWLDGLYMGLPFYLEYETRY
NDRKNYSDIFGQFKFVIENMRNPINGLYFHAMDTSREAFWCDKVTGLSQHSWLRAIGWYTMALIDTLDQVDNKDHKYDAE
CKMLEDAFKDLVDSMLKYQDESGMWYQVVNYGGMDKNYLETSGSSIMAYALLKAIRLGYLSDDYAQYAKKAIDGICERYL
KTNEDGSLSLGGICLVAGLGGNGRRPGTYDYYMSEPIVEDDAKGVGPFLLAYTELLRYENK

Specific function: Catalyzes the hydrolysis of unsaturated rhamnogalacturonan disaccharide to yield unsaturated D- galacturonic acid and L-rhamnose. It cannot act on unsaturated glucuronyl hydrolase (UGL) substrates containing unsaturated D- glucuronic acid at the non-reduc

COG id: COG4225

COG function: function code R; Predicted unsaturated glucuronyl hydrolase involved in regulation of bacterial surface properties, and related proteins

Gene ontology:

Cell location: Cytoplasm [H]

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: Belongs to the glycosyl hydrolase 105 family [H]

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR008928
- InterPro:   IPR012341
- InterPro:   IPR010905 [H]

Pfam domain/function: PF07470 Glyco_hydro_88 [H]

EC number: NA

Molecular weight: Translated: 44035; Mature: 44035

Theoretical pI: Translated: 4.63; Mature: 4.63

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.6 %Cys     (Translated Protein)
3.7 %Met     (Translated Protein)
5.2 %Cys+Met (Translated Protein)
1.6 %Cys     (Mature Protein)
3.7 %Met     (Mature Protein)
5.2 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MDAVVKYIDGLLEKSTPDAPVWNIEKIKQGLKSKWNYIDGCMIKAVLQMYDLTKDEKYLK
CCHHHHHHHHHHHCCCCCCCCCCHHHHHHHHHHHCCHHHHHHHHHHHHHHHCCCCHHHHH
FADDFIDYRVFEDGTIDGYSIGEKNIDNVNAGKTLFELYDLTGKEKYKKAADLVYSQIEI
HHHHHHHEEEECCCCCCCCCCCCCCCCCCCCHHHHHHHHHCCCHHHHHHHHHHHHHHHHH
MPRCQNEARSFWHKDIYPNQVWLDGLYMGLPFYLEYETRYNDRKNYSDIFGQFKFVIENM
HHHHHHHHHHHHHCCCCCCCEEHHHHHHCCCEEEEEECCCCCCCCHHHHHHHHHHHHHHH
RNPINGLYFHAMDTSREAFWCDKVTGLSQHSWLRAIGWYTMALIDTLDQVDNKDHKYDAE
CCCCCCEEEEEECCCCCHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCHH
CKMLEDAFKDLVDSMLKYQDESGMWYQVVNYGGMDKNYLETSGSSIMAYALLKAIRLGYL
HHHHHHHHHHHHHHHHHHCCCCCCEEEEEECCCCCCHHHHCCCCHHHHHHHHHHHHHCCC
SDDYAQYAKKAIDGICERYLKTNEDGSLSLGGICLVAGLGGNGRRPGTYDYYMSEPIVED
CHHHHHHHHHHHHHHHHHHHHCCCCCCEEECCEEEEEECCCCCCCCCCCCHHCCCCCCCC
DAKGVGPFLLAYTELLRYENK
CCCCCCHHHHHHHHHHHHCCC
>Mature Secondary Structure
MDAVVKYIDGLLEKSTPDAPVWNIEKIKQGLKSKWNYIDGCMIKAVLQMYDLTKDEKYLK
CCHHHHHHHHHHHCCCCCCCCCCHHHHHHHHHHHCCHHHHHHHHHHHHHHHCCCCHHHHH
FADDFIDYRVFEDGTIDGYSIGEKNIDNVNAGKTLFELYDLTGKEKYKKAADLVYSQIEI
HHHHHHHEEEECCCCCCCCCCCCCCCCCCCCHHHHHHHHHCCCHHHHHHHHHHHHHHHHH
MPRCQNEARSFWHKDIYPNQVWLDGLYMGLPFYLEYETRYNDRKNYSDIFGQFKFVIENM
HHHHHHHHHHHHHCCCCCCCEEHHHHHHCCCEEEEEECCCCCCCCHHHHHHHHHHHHHHH
RNPINGLYFHAMDTSREAFWCDKVTGLSQHSWLRAIGWYTMALIDTLDQVDNKDHKYDAE
CCCCCCEEEEEECCCCCHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCHH
CKMLEDAFKDLVDSMLKYQDESGMWYQVVNYGGMDKNYLETSGSSIMAYALLKAIRLGYL
HHHHHHHHHHHHHHHHHHCCCCCCEEEEEECCCCCCHHHHCCCCHHHHHHHHHHHHHCCC
SDDYAQYAKKAIDGICERYLKTNEDGSLSLGGICLVAGLGGNGRRPGTYDYYMSEPIVED
CHHHHHHHHHHHHHHHHHHHHCCCCCCEEECCEEEEEECCCCCCCCCCCCHHCCCCCCCC
DAKGVGPFLLAYTELLRYENK
CCCCCCHHHHHHHHHHHHCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: 9387221; 9384377 [H]