| Definition | Eubacterium eligens ATCC 27750 chromosome, complete genome. |
|---|---|
| Accession | NC_012778 |
| Length | 2,144,190 |
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The map label for this gene is 238916590
Identifier: 238916590
GI number: 238916590
Start: 650105
End: 650989
Strand: Direct
Name: 238916590
Synonym: EUBELI_00647
Alternate gene names: NA
Gene position: 650105-650989 (Clockwise)
Preceding gene: 238916589
Following gene: 238916591
Centisome position: 30.32
GC content: 36.61
Gene sequence:
>885_bases ATGGACAAACAGAAAACAGGTGAGCTTATTAAGAGTGCGAGAATTAAGAAAGGATATACACAGGTTGAATTGGGTGATTT GCTTGGAGTGACTAACAAAGCAATTTCCAGATGGGAAAAAGGAGACAGTTTTCCCGATATCAGTGTAATTGAGGAATTGT CGAGGGTGCTTGATATAAGAATTCAGGATATTGTGATAGGAGATGTTACGGAGCCTGATAGCGAAACAGCAGTTACAGAG GTTGTAAGAGCAGTAAAGCTTCAGGACAAGGTGAAGAAAAGAAAATTCATTTCGAGTGGTGTATCCTGCATAGCTGCCGG ATATATGCTTGTATGTGGATGGTATTCATTCAGAGGACAGGCAGATAATTCAATTCTGGGTTATCTTACGGTTTCGCTGG CTATAATGATTGCTATAATGCTTGCAGGTGAAAAGTCTGGCGGAGTACATATGCATAACGGGAATGCAGGCGGGCGTGTA TATAATATAATAGGATTTGCAAGTATGGGATACTGTTTTATTATGATGATTGCGTGCAGCTGCATATTTAATAATCATGA GGTAGATTTATGGAAGATTGCCAGATACATAGGAAAGATTATAAATGTGCAGCTTATTATAGTTTTTGTGCTTAATCTGG CTGTGCTTGTTATTCAGGATTATATCAACGAGCATAAATACGAAGGAGTAATGAGTGAGGCTTACAGTCTTGTAACAGCA TGTTTTATGAGCATGATGTATGCTTGTTTTCTGCATACATTATCAGATATTCATAGTTTTAATAAATATATTATGATAAT AGCTGTTGTTGCAGTGATTGAAATGCTGGCAGCTTATTTCATTAGTTTCAGAATTAAAAAACATAATTGGTCTTTTGAAA AGTAA
Upstream 100 bases:
>100_bases TCTCGCTATGATAGATTGCTATTTCTAAGATTTGTTAGTAACATTTTAATAGACAAAGAACAGTGCTGTGATATTAATAC TACAATCAGGAGGTAGCTCT
Downstream 100 bases:
>100_bases AAAATAGATAATGAAAATGTATAGGAGCATGTTGCAAGATATCAAGTAACATGCTCCTTCTTGTTGTAACAAATTAATTA TTATTAAGAGTCTTTTCAGT
Product: hypothetical protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 294; Mature: 294
Protein sequence:
>294_residues MDKQKTGELIKSARIKKGYTQVELGDLLGVTNKAISRWEKGDSFPDISVIEELSRVLDIRIQDIVIGDVTEPDSETAVTE VVRAVKLQDKVKKRKFISSGVSCIAAGYMLVCGWYSFRGQADNSILGYLTVSLAIMIAIMLAGEKSGGVHMHNGNAGGRV YNIIGFASMGYCFIMMIACSCIFNNHEVDLWKIARYIGKIINVQLIIVFVLNLAVLVIQDYINEHKYEGVMSEAYSLVTA CFMSMMYACFLHTLSDIHSFNKYIMIIAVVAVIEMLAAYFISFRIKKHNWSFEK
Sequences:
>Translated_294_residues MDKQKTGELIKSARIKKGYTQVELGDLLGVTNKAISRWEKGDSFPDISVIEELSRVLDIRIQDIVIGDVTEPDSETAVTE VVRAVKLQDKVKKRKFISSGVSCIAAGYMLVCGWYSFRGQADNSILGYLTVSLAIMIAIMLAGEKSGGVHMHNGNAGGRV YNIIGFASMGYCFIMMIACSCIFNNHEVDLWKIARYIGKIINVQLIIVFVLNLAVLVIQDYINEHKYEGVMSEAYSLVTA CFMSMMYACFLHTLSDIHSFNKYIMIIAVVAVIEMLAAYFISFRIKKHNWSFEK >Mature_294_residues MDKQKTGELIKSARIKKGYTQVELGDLLGVTNKAISRWEKGDSFPDISVIEELSRVLDIRIQDIVIGDVTEPDSETAVTE VVRAVKLQDKVKKRKFISSGVSCIAAGYMLVCGWYSFRGQADNSILGYLTVSLAIMIAIMLAGEKSGGVHMHNGNAGGRV YNIIGFASMGYCFIMMIACSCIFNNHEVDLWKIARYIGKIINVQLIIVFVLNLAVLVIQDYINEHKYEGVMSEAYSLVTA CFMSMMYACFLHTLSDIHSFNKYIMIIAVVAVIEMLAAYFISFRIKKHNWSFEK
Specific function: Unknown
COG id: COG1396
COG function: function code K; Predicted transcriptional regulators
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 32936; Mature: 32936
Theoretical pI: Translated: 8.05; Mature: 8.05
Prosite motif: PS50943 HTH_CROC1
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
2.4 %Cys (Translated Protein) 4.8 %Met (Translated Protein) 7.1 %Cys+Met (Translated Protein) 2.4 %Cys (Mature Protein) 4.8 %Met (Mature Protein) 7.1 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MDKQKTGELIKSARIKKGYTQVELGDLLGVTNKAISRWEKGDSFPDISVIEELSRVLDIR CCCHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHH IQDIVIGDVTEPDSETAVTEVVRAVKLQDKVKKRKFISSGVSCIAAGYMLVCGWYSFRGQ HHHEEEECCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCC ADNSILGYLTVSLAIMIAIMLAGEKSGGVHMHNGNAGGRVYNIIGFASMGYCFIMMIACS CCCHHHHHHHHHHHHHHHHHHHCCCCCCEEEECCCCCCCHHHHHHHHHHHHHHHHHHHHH CIFNNHEVDLWKIARYIGKIINVQLIIVFVLNLAVLVIQDYINEHKYEGVMSEAYSLVTA HHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH CFMSMMYACFLHTLSDIHSFNKYIMIIAVVAVIEMLAAYFISFRIKKHNWSFEK HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCC >Mature Secondary Structure MDKQKTGELIKSARIKKGYTQVELGDLLGVTNKAISRWEKGDSFPDISVIEELSRVLDIR CCCHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHH IQDIVIGDVTEPDSETAVTEVVRAVKLQDKVKKRKFISSGVSCIAAGYMLVCGWYSFRGQ HHHEEEECCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCC ADNSILGYLTVSLAIMIAIMLAGEKSGGVHMHNGNAGGRVYNIIGFASMGYCFIMMIACS CCCHHHHHHHHHHHHHHHHHHHCCCCCCEEEECCCCCCCHHHHHHHHHHHHHHHHHHHHH CIFNNHEVDLWKIARYIGKIINVQLIIVFVLNLAVLVIQDYINEHKYEGVMSEAYSLVTA HHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH CFMSMMYACFLHTLSDIHSFNKYIMIIAVVAVIEMLAAYFISFRIKKHNWSFEK HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA