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The map label for this gene is 238916552

Identifier: 238916552

GI number: 238916552

Start: 619711

End: 620748

Strand: Direct

Name: 238916552

Synonym: EUBELI_00609

Alternate gene names: NA

Gene position: 619711-620748 (Clockwise)

Preceding gene: 238916551

Following gene: 238916553

Centisome position: 28.9

GC content: 36.42

Gene sequence:

>1038_bases
ATGGAGAAAGAACAGCTTCAGCAACTGATAGAAAACAATAAGGATGATCTTTTTTCTGAGATTAAAGAGGAAATATCGGA
TGAATCTGTTACTGATATTGAGTGGGATGGATATAATCTATGGATAACCCAGTTGGGAAGAGGCTGTTATATTGCTATGA
AAGAATTAAGTGACAGATATATGGACAATCTGTCAATAAGACTTGCTAATATAATGGGTGTGCCTTTTAACAGGGTACAC
CCGATATTGGAGGCCAATACCGAAATTTTAAGAATATCAATATGGCATGAATCAAGATGTGGAAAGAAAAGTATGGCTAT
AAGAAAGATTCCAGGAAAGCTTCGTTTCGGACATGTTGATTTAATTCAATCTGACTATGCACCAGAGAGCATTATCACAT
TACTTGAGAATTGCGTAACTGCACATCTGTCAACAGTTATAGGTGGGCAGCCACATGCAGGAAAGACAGAACTTCTCAAG
TATCTTGCAACATATATTCCGGCAGAAGAGAAGGTTGGAGTATATGAAGATAATCAGGAAATTCATTACCGGCAGATTAA
TCCGCACAGCAAATGTGTTGAGTTTTTTGTCGATTCTAAAATATCTTATCAGGATATTATTAAAGCGGGACTGAGACATA
ATATAGACTGGGTTTTGTTATCAGAATCAAGAGGACCGGAGGTTATGGAGCTGCTTAACAGCCTGTCTACAGGTGCATAT
TGTATGACAACAATGCATCTGGATGATATAAGGGATATGCCAGACAGAATGTATTCAATGCTTGGAAAGGGAGAATCCTC
AGAAAGATTTATTAACAGTATATATAAATACATAGATCTTGTTGTACTGGTGGATTGTGACAGATTTGAAAAAAGAAAAA
TAAGGCAGGTTGGTTTTCTTAGTAGAAATCATGGTAATAACAGCTGCACTGTTGTATTTGAAGATGGGGAGTTTAAGGAT
GTTGATATTCCAGAAGACATTAAAGAAAAATTCATAAGATTTGGAATAGACAATCCGTATGTATGGAGGCATGATTGA

Upstream 100 bases:

>100_bases
TGACAGAACTAAAGGTGCTGTCAGTGATATATCATATAAGGAACATATATATGATGCTATAGATGCAAGTAAATCACAGT
AAAACAGGATAGGAGAATGT

Downstream 100 bases:

>100_bases
AAAGATTATTAAAATATTTATCAGTTAATCAGGTTATGAAAGACATAGCTGATGTTAATGGTGTAATGTCAGTAAAAAGA
TTTATTATCACAACAATAAT

Product: pilus assembly protein CpaF

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 345; Mature: 345

Protein sequence:

>345_residues
MEKEQLQQLIENNKDDLFSEIKEEISDESVTDIEWDGYNLWITQLGRGCYIAMKELSDRYMDNLSIRLANIMGVPFNRVH
PILEANTEILRISIWHESRCGKKSMAIRKIPGKLRFGHVDLIQSDYAPESIITLLENCVTAHLSTVIGGQPHAGKTELLK
YLATYIPAEEKVGVYEDNQEIHYRQINPHSKCVEFFVDSKISYQDIIKAGLRHNIDWVLLSESRGPEVMELLNSLSTGAY
CMTTMHLDDIRDMPDRMYSMLGKGESSERFINSIYKYIDLVVLVDCDRFEKRKIRQVGFLSRNHGNNSCTVVFEDGEFKD
VDIPEDIKEKFIRFGIDNPYVWRHD

Sequences:

>Translated_345_residues
MEKEQLQQLIENNKDDLFSEIKEEISDESVTDIEWDGYNLWITQLGRGCYIAMKELSDRYMDNLSIRLANIMGVPFNRVH
PILEANTEILRISIWHESRCGKKSMAIRKIPGKLRFGHVDLIQSDYAPESIITLLENCVTAHLSTVIGGQPHAGKTELLK
YLATYIPAEEKVGVYEDNQEIHYRQINPHSKCVEFFVDSKISYQDIIKAGLRHNIDWVLLSESRGPEVMELLNSLSTGAY
CMTTMHLDDIRDMPDRMYSMLGKGESSERFINSIYKYIDLVVLVDCDRFEKRKIRQVGFLSRNHGNNSCTVVFEDGEFKD
VDIPEDIKEKFIRFGIDNPYVWRHD
>Mature_345_residues
MEKEQLQQLIENNKDDLFSEIKEEISDESVTDIEWDGYNLWITQLGRGCYIAMKELSDRYMDNLSIRLANIMGVPFNRVH
PILEANTEILRISIWHESRCGKKSMAIRKIPGKLRFGHVDLIQSDYAPESIITLLENCVTAHLSTVIGGQPHAGKTELLK
YLATYIPAEEKVGVYEDNQEIHYRQINPHSKCVEFFVDSKISYQDIIKAGLRHNIDWVLLSESRGPEVMELLNSLSTGAY
CMTTMHLDDIRDMPDRMYSMLGKGESSERFINSIYKYIDLVVLVDCDRFEKRKIRQVGFLSRNHGNNSCTVVFEDGEFKD
VDIPEDIKEKFIRFGIDNPYVWRHD

Specific function: Unknown

COG id: COG0630

COG function: function code NU; Type IV secretory pathway, VirB11 components, and related ATPases involved in archaeal flagella biosynthesis

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: Belongs to the GSP E family [H]

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR002078
- InterPro:   IPR001482 [H]

Pfam domain/function: PF00437 GSPII_E [H]

EC number: NA

Molecular weight: Translated: 39982; Mature: 39982

Theoretical pI: Translated: 5.09; Mature: 5.09

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

2.0 %Cys     (Translated Protein)
3.2 %Met     (Translated Protein)
5.2 %Cys+Met (Translated Protein)
2.0 %Cys     (Mature Protein)
3.2 %Met     (Mature Protein)
5.2 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MEKEQLQQLIENNKDDLFSEIKEEISDESVTDIEWDGYNLWITQLGRGCYIAMKELSDRY
CCHHHHHHHHHCCHHHHHHHHHHHHCCCCCCEEEECCEEEEEECCCCCCEEHHHHHHHHH
MDNLSIRLANIMGVPFNRVHPILEANTEILRISIWHESRCGKKSMAIRKIPGKLRFGHVD
HHHHHEEEEHHCCCCHHHHCHHHHCCCEEEEEEEEECCCCCCHHHHHHHCCCCEEECCHH
LIQSDYAPESIITLLENCVTAHLSTVIGGQPHAGKTELLKYLATYIPAEEKVGVYEDNQE
HHHCCCCHHHHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHCCCCCCCCCEECCCC
IHYRQINPHSKCVEFFVDSKISYQDIIKAGLRHNIDWVLLSESRGPEVMELLNSLSTGAY
EEEEECCCHHHHHHHHHCCCCCHHHHHHHHHHCCCCEEEEECCCCCHHHHHHHHHCCCCE
CMTTMHLDDIRDMPDRMYSMLGKGESSERFINSIYKYIDLVVLVDCDRFEKRKIRQVGFL
EEEEEEHHHHHCCHHHHHHHHCCCCCHHHHHHHHHHHHHEEEEECCCHHHHHHHHHHHCC
SRNHGNNSCTVVFEDGEFKDVDIPEDIKEKFIRFGIDNPYVWRHD
CCCCCCCEEEEEEECCCCCCCCCCHHHHHHHHHHCCCCCEEEECC
>Mature Secondary Structure
MEKEQLQQLIENNKDDLFSEIKEEISDESVTDIEWDGYNLWITQLGRGCYIAMKELSDRY
CCHHHHHHHHHCCHHHHHHHHHHHHCCCCCCEEEECCEEEEEECCCCCCEEHHHHHHHHH
MDNLSIRLANIMGVPFNRVHPILEANTEILRISIWHESRCGKKSMAIRKIPGKLRFGHVD
HHHHHEEEEHHCCCCHHHHCHHHHCCCEEEEEEEEECCCCCCHHHHHHHCCCCEEECCHH
LIQSDYAPESIITLLENCVTAHLSTVIGGQPHAGKTELLKYLATYIPAEEKVGVYEDNQE
HHHCCCCHHHHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHCCCCCCCCCEECCCC
IHYRQINPHSKCVEFFVDSKISYQDIIKAGLRHNIDWVLLSESRGPEVMELLNSLSTGAY
EEEEECCCHHHHHHHHHCCCCCHHHHHHHHHHCCCCEEEEECCCCCHHHHHHHHHCCCCE
CMTTMHLDDIRDMPDRMYSMLGKGESSERFINSIYKYIDLVVLVDCDRFEKRKIRQVGFL
EEEEEEHHHHHCCHHHHHHHHCCCCCHHHHHHHHHHHHHEEEEECCCHHHHHHHHHHHCC
SRNHGNNSCTVVFEDGEFKDVDIPEDIKEKFIRFGIDNPYVWRHD
CCCCCCCEEEEEEECCCCCCCCCCHHHHHHHHHHCCCCCEEEECC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 10475962; 12004073 [H]