Click here to switch to the map view.

The map label for this gene is wrbA [C]

Identifier: 238916514

GI number: 238916514

Start: 585810

End: 586232

Strand: Direct

Name: wrbA [C]

Synonym: EUBELI_00571

Alternate gene names: 238916514

Gene position: 585810-586232 (Clockwise)

Preceding gene: 238916513

Following gene: 238916515

Centisome position: 27.32

GC content: 45.15

Gene sequence:

>423_bases
ATGAGTAAAGTAGCAGTAGTTTATTGGAGCGGAACAGGTAATACAGAGACAATGGCTAACGCAGTTGCAGAAGGTGCTAA
AGGAGCCGGAGCAGAGGTTGATGTACTTGTGGCAAATGATTTTAATTCAGAAAAGGTTGCTGAATATGATGGAATCGCAT
TCGGATGCCCGGCAATGGGAGCAGAGAATCTCGAAGAATCAGAGTTTGAGCCAATGTTCACAGAGGTAGAAGGAAGTCTT
AGCGGTAAGAAAATTGCACTTTTTGGTTCATATGGATGGGGAAGCGGCGAATGGATGGCTGACTGGGAAGAAAGAAGTAA
GGCTGCAGGTGCTGTTCTTGCAACAGACAGCGTAATCTGTCAGGAAGCACCAGATGATGATGCTGTTGAAAACTGCAAAA
AACTTGGGGCAGCGTTAGCATAA

Upstream 100 bases:

>100_bases
AAAATGCACAGAAGTATATTTAAGAGTCTTTGACCGAGGCAGAAGCATATCTGCATTAACGGTTTAAGCATATAAAAAGT
AAAAAAGGAGAGATTGGATA

Downstream 100 bases:

>100_bases
TTATTTATTGCCTGTAATATATTGAAAAGATTGCACATTTTGCCCCCTGGTTGGTTATATCAATCAGGGGTTAAATTGTT
CTAAAAAATATTATAAAAAT

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 140; Mature: 139

Protein sequence:

>140_residues
MSKVAVVYWSGTGNTETMANAVAEGAKGAGAEVDVLVANDFNSEKVAEYDGIAFGCPAMGAENLEESEFEPMFTEVEGSL
SGKKIALFGSYGWGSGEWMADWEERSKAAGAVLATDSVICQEAPDDDAVENCKKLGAALA

Sequences:

>Translated_140_residues
MSKVAVVYWSGTGNTETMANAVAEGAKGAGAEVDVLVANDFNSEKVAEYDGIAFGCPAMGAENLEESEFEPMFTEVEGSL
SGKKIALFGSYGWGSGEWMADWEERSKAAGAVLATDSVICQEAPDDDAVENCKKLGAALA
>Mature_139_residues
SKVAVVYWSGTGNTETMANAVAEGAKGAGAEVDVLVANDFNSEKVAEYDGIAFGCPAMGAENLEESEFEPMFTEVEGSLS
GKKIALFGSYGWGSGEWMADWEERSKAAGAVLATDSVICQEAPDDDAVENCKKLGAALA

Specific function: Low-potential electron donor to a number of redox enzymes [H]

COG id: COG0716

COG function: function code C; Flavodoxins

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Contains 1 flavodoxin-like domain [H]

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR010087
- InterPro:   IPR008254
- InterPro:   IPR001226 [H]

Pfam domain/function: PF00258 Flavodoxin_1 [H]

EC number: NA

Molecular weight: Translated: 14600; Mature: 14469

Theoretical pI: Translated: 3.81; Mature: 3.81

Prosite motif: PS00201 FLAVODOXIN ; PS50902 FLAVODOXIN_LIKE

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

2.1 %Cys     (Translated Protein)
3.6 %Met     (Translated Protein)
5.7 %Cys+Met (Translated Protein)
2.2 %Cys     (Mature Protein)
2.9 %Met     (Mature Protein)
5.0 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MSKVAVVYWSGTGNTETMANAVAEGAKGAGAEVDVLVANDFNSEKVAEYDGIAFGCPAMG
CCCEEEEEECCCCCHHHHHHHHHHCCCCCCCEEEEEEECCCCCCCCHHCCCEEECCCCCC
AENLEESEFEPMFTEVEGSLSGKKIALFGSYGWGSGEWMADWEERSKAAGAVLATDSVIC
CCCCCCCCCCCHHHHHCCCCCCCEEEEEECCCCCCCCCCCCHHHHHHHCCEEEECCCEEE
QEAPDDDAVENCKKLGAALA
CCCCCCHHHHHHHHHHHCCC
>Mature Secondary Structure 
SKVAVVYWSGTGNTETMANAVAEGAKGAGAEVDVLVANDFNSEKVAEYDGIAFGCPAMG
CCEEEEEECCCCCHHHHHHHHHHCCCCCCCEEEEEEECCCCCCCCHHCCCEEECCCCCC
AENLEESEFEPMFTEVEGSLSGKKIALFGSYGWGSGEWMADWEERSKAAGAVLATDSVIC
CCCCCCCCCCCHHHHHCCCCCCCEEEEEECCCCCCCCCCCCHHHHHHHCCEEEECCCEEE
QEAPDDDAVENCKKLGAALA
CCCCCCHHHHHHHHHHHCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 4711610; 4843143; 5126921; 2161759; 2253614 [H]