| Definition | Eubacterium eligens ATCC 27750 chromosome, complete genome. |
|---|---|
| Accession | NC_012778 |
| Length | 2,144,190 |
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The map label for this gene is argS [H]
Identifier: 238916469
GI number: 238916469
Start: 531250
End: 533016
Strand: Direct
Name: argS [H]
Synonym: EUBELI_00526
Alternate gene names: 238916469
Gene position: 531250-533016 (Clockwise)
Preceding gene: 238916468
Following gene: 238916470
Centisome position: 24.78
GC content: 37.97
Gene sequence:
>1767_bases ATGAAGACGATTATTGAACTTATTACTGATGAGATTAAAAATGTATTCGCTGAATGTGGATATGATGAGGCATATGCGAA AGTTACAGTTTCTAACAGACCTGACCTGTGTGAGTTTCAGTGTAACGGTGCTATGGCAGCAGCCAAAGCATATAAGAAAG CACCATTTATGATTGCTGATGAGGTTGTTGCAAAGTTAGCAGATAACAAGATGTTTTCTAAGATTGAGAGTGTTAAACCA GGATTTATTAATATTAATATATGTGAAGATTATCTGGCAGGATATCTTAATGAGATGTCTGAAACTGAGAAGTTCGGCTA TGTTAATTCGGAGAGCAATAAGACTGTTATTGTGGATTACGGCGGAGCTAATGCCGCAAAGCCACTTCATGTAGGACATC TTCGTTCTGCAGTTATCGGAGAGAGCGTTAAGAGAATCAACACATTTGTTGGAAATAAGACTATTGGTGATGTACATCTT GGAGACTGGGGTCTTCAGATGGGACTTATCATTGAAGAGTTAAGAGATAGAAAGCCAGAACTTCCGTATTTTGATGACAG TTTTACCGGTGAGTATCCAGAGGAAGCACCATTTACAATCTCAGAGCTTGAGGAGATTTATCCGGCAGCTTCTGCAAAGT CTAAGGAAGATATTGCATTTGCAGAAAGAGCTCATGAAGCTACACTTAAGTTACAGAGTGGTGATAAGGCATGCCGTGCA ATATGGCATCATATCATGAATGTTTCTAAAGCTGACCTTAAGAAGAATTATGATAATCTTAATGTGCATTTTGATTTATG GAAGGGGGAATCGGATGCACAGCCATATATTGACGATATGGTTAATAAGATGATTGCAGACGGAATTGCTTATGAAAGCC AGGGCGCAACTGTTGTAGATATACAGCAGGAGGGTGATACTAAGGAGCTTCCACCATGCATCGTAAGAAAATCTGATGGT GCGGCACTTTATGCAACATCTGACCTTGCAACTATTGTTGAAAGAGAAAAGTTATATCATCCTGATACATATATTTATCT TGCTGATAAGAGGCAGGAACTTCATTTTACACAGGTATTCAGAACGGCTAAGAAGGCTGGGATTGTAGCGCCTGATGCAG ATATGAGATTTGTGGGCTTTGGTACTATGAACGGTAAAGATGGTAAGCCATTCAAGACGCGTTCAGGTGGTGTTATGAGA CTTGAGCATCTTATAGCTGATATTGATGAAGCTGTATATGAGAAAATTATGTCTAACAGAACTGTTGAAGAGACAGAAGC AAGAGATACAGCTAAGATAGTAGGACTTGCTGCATTAAAGTATGGAGATCTTTCTAATCAGGCATCAAAGGATTATGTGT TTGATATTGAGAGATTTTCATCATTTGAGGGTAATACAGGACCATATATTCTTTACACAATTGTAAGAATTAAGTCTATC CTTAACAAATATACAGAAAATGGTGGAAGCACAAATAACCTTAAAATCATGGCTGCTACAGAAGAAAGTGAGAAGAATCT TTCTTTATCACTTATTAAGTTTGCAGATATAATTGATGGGGCATATAGGGATAATGCACCACATAAGATATGTCAGTTTA TATATGAGGTATCTAACGCATTTAACGGCTTTTATCATAACAATAAGATACTTTCAGAACCTGACGAGGCTAAGAAGGCA AGTTATATTGCACTTATCAGCCTTACTAAGAGCATTCTCGAGCAGTGTATTGATTTGCTTGCGATTGAATGCCCTGACAG AATGTAA
Upstream 100 bases:
>100_bases ATGTCTTGATGGGGAGAACATACAGATGTCATTACCGGCAGAGAGTTATGGGCTGTTTCTTGTAAAGGTGGTTTACTAGA TATTGTAAAAGGTGGAGAAT
Downstream 100 bases:
>100_bases AGGAGAAATTTGATGGGTAAATTATTATCATTTGCAATACCATGTTACAACTCCGCAGAGTATATGGAACATTGTATTAA TACAGTGCTTGCCGGTGGCG
Product: arginyl-tRNA synthetase
Products: NA
Alternate protein names: Arginine--tRNA ligase; ArgRS [H]
Number of amino acids: Translated: 588; Mature: 588
Protein sequence:
>588_residues MKTIIELITDEIKNVFAECGYDEAYAKVTVSNRPDLCEFQCNGAMAAAKAYKKAPFMIADEVVAKLADNKMFSKIESVKP GFININICEDYLAGYLNEMSETEKFGYVNSESNKTVIVDYGGANAAKPLHVGHLRSAVIGESVKRINTFVGNKTIGDVHL GDWGLQMGLIIEELRDRKPELPYFDDSFTGEYPEEAPFTISELEEIYPAASAKSKEDIAFAERAHEATLKLQSGDKACRA IWHHIMNVSKADLKKNYDNLNVHFDLWKGESDAQPYIDDMVNKMIADGIAYESQGATVVDIQQEGDTKELPPCIVRKSDG AALYATSDLATIVEREKLYHPDTYIYLADKRQELHFTQVFRTAKKAGIVAPDADMRFVGFGTMNGKDGKPFKTRSGGVMR LEHLIADIDEAVYEKIMSNRTVEETEARDTAKIVGLAALKYGDLSNQASKDYVFDIERFSSFEGNTGPYILYTIVRIKSI LNKYTENGGSTNNLKIMAATEESEKNLSLSLIKFADIIDGAYRDNAPHKICQFIYEVSNAFNGFYHNNKILSEPDEAKKA SYIALISLTKSILEQCIDLLAIECPDRM
Sequences:
>Translated_588_residues MKTIIELITDEIKNVFAECGYDEAYAKVTVSNRPDLCEFQCNGAMAAAKAYKKAPFMIADEVVAKLADNKMFSKIESVKP GFININICEDYLAGYLNEMSETEKFGYVNSESNKTVIVDYGGANAAKPLHVGHLRSAVIGESVKRINTFVGNKTIGDVHL GDWGLQMGLIIEELRDRKPELPYFDDSFTGEYPEEAPFTISELEEIYPAASAKSKEDIAFAERAHEATLKLQSGDKACRA IWHHIMNVSKADLKKNYDNLNVHFDLWKGESDAQPYIDDMVNKMIADGIAYESQGATVVDIQQEGDTKELPPCIVRKSDG AALYATSDLATIVEREKLYHPDTYIYLADKRQELHFTQVFRTAKKAGIVAPDADMRFVGFGTMNGKDGKPFKTRSGGVMR LEHLIADIDEAVYEKIMSNRTVEETEARDTAKIVGLAALKYGDLSNQASKDYVFDIERFSSFEGNTGPYILYTIVRIKSI LNKYTENGGSTNNLKIMAATEESEKNLSLSLIKFADIIDGAYRDNAPHKICQFIYEVSNAFNGFYHNNKILSEPDEAKKA SYIALISLTKSILEQCIDLLAIECPDRM >Mature_588_residues MKTIIELITDEIKNVFAECGYDEAYAKVTVSNRPDLCEFQCNGAMAAAKAYKKAPFMIADEVVAKLADNKMFSKIESVKP GFININICEDYLAGYLNEMSETEKFGYVNSESNKTVIVDYGGANAAKPLHVGHLRSAVIGESVKRINTFVGNKTIGDVHL GDWGLQMGLIIEELRDRKPELPYFDDSFTGEYPEEAPFTISELEEIYPAASAKSKEDIAFAERAHEATLKLQSGDKACRA IWHHIMNVSKADLKKNYDNLNVHFDLWKGESDAQPYIDDMVNKMIADGIAYESQGATVVDIQQEGDTKELPPCIVRKSDG AALYATSDLATIVEREKLYHPDTYIYLADKRQELHFTQVFRTAKKAGIVAPDADMRFVGFGTMNGKDGKPFKTRSGGVMR LEHLIADIDEAVYEKIMSNRTVEETEARDTAKIVGLAALKYGDLSNQASKDYVFDIERFSSFEGNTGPYILYTIVRIKSI LNKYTENGGSTNNLKIMAATEESEKNLSLSLIKFADIIDGAYRDNAPHKICQFIYEVSNAFNGFYHNNKILSEPDEAKKA SYIALISLTKSILEQCIDLLAIECPDRM
Specific function: Unknown
COG id: COG0018
COG function: function code J; Arginyl-tRNA synthetase
Gene ontology:
Cell location: Cytoplasm [H]
Metaboloic importance: Essential [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the class-I aminoacyl-tRNA synthetase family [H]
Homologues:
Organism=Homo sapiens, GI15149476, Length=588, Percent_Identity=30.952380952381, Blast_Score=251, Evalue=9e-67, Organism=Homo sapiens, GI197100773, Length=478, Percent_Identity=29.0794979079498, Blast_Score=193, Evalue=4e-49, Organism=Escherichia coli, GI1788184, Length=595, Percent_Identity=34.453781512605, Blast_Score=335, Evalue=4e-93, Organism=Caenorhabditis elegans, GI71985061, Length=586, Percent_Identity=30.8873720136519, Blast_Score=229, Evalue=4e-60, Organism=Caenorhabditis elegans, GI71985068, Length=541, Percent_Identity=32.1626617375231, Blast_Score=220, Evalue=2e-57, Organism=Caenorhabditis elegans, GI17532153, Length=387, Percent_Identity=23.7726098191214, Blast_Score=125, Evalue=5e-29, Organism=Saccharomyces cerevisiae, GI6321883, Length=551, Percent_Identity=25.9528130671506, Blast_Score=183, Evalue=8e-47, Organism=Saccharomyces cerevisiae, GI6320548, Length=551, Percent_Identity=25.9528130671506, Blast_Score=181, Evalue=3e-46, Organism=Drosophila melanogaster, GI18859963, Length=570, Percent_Identity=31.2280701754386, Blast_Score=253, Evalue=3e-67, Organism=Drosophila melanogaster, GI28571570, Length=382, Percent_Identity=27.4869109947644, Blast_Score=133, Evalue=3e-31,
Paralogues:
None
Copy number: 789 Molecules/Cell In: Growth Phase, Glucose-minimal MOPS Media. 800 Molecules/Cell In: Glucose minimal media [C]
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR001412 - InterPro: IPR001278 - InterPro: IPR015945 - InterPro: IPR005148 - InterPro: IPR008909 - InterPro: IPR014729 - InterPro: IPR009080 [H]
Pfam domain/function: PF03485 Arg_tRNA_synt_N; PF05746 DALR_1; PF00750 tRNA-synt_1d [H]
EC number: =6.1.1.19 [H]
Molecular weight: Translated: 65639; Mature: 65639
Theoretical pI: Translated: 4.87; Mature: 4.87
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.5 %Cys (Translated Protein) 2.6 %Met (Translated Protein) 4.1 %Cys+Met (Translated Protein) 1.5 %Cys (Mature Protein) 2.6 %Met (Mature Protein) 4.1 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MKTIIELITDEIKNVFAECGYDEAYAKVTVSNRPDLCEFQCNGAMAAAKAYKKAPFMIAD CHHHHHHHHHHHHHHHHHCCCCCCEEEEEECCCCCEEEEECCCHHHHHHHHHCCCCHHHH EVVAKLADNKMFSKIESVKPGFININICEDYLAGYLNEMSETEKFGYVNSESNKTVIVDY HHHHHHHCCHHHHHHHHCCCCEEEEEEHHHHHHHHHHHHHHHHHCCCEECCCCCEEEEEE GGANAAKPLHVGHLRSAVIGESVKRINTFVGNKTIGDVHLGDWGLQMGLIIEELRDRKPE CCCCCCCCCCHHHHHHHHHHHHHHHHHHHHCCCCCCCEEECCHHHHHHHHHHHHHCCCCC LPYFDDSFTGEYPEEAPFTISELEEIYPAASAKSKEDIAFAERAHEATLKLQSGDKACRA CCCCCCCCCCCCCCCCCCCHHHHHHHCCCCCCCCCHHHHHHHHHHHHEEEECCCCHHHHH IWHHIMNVSKADLKKNYDNLNVHFDLWKGESDAQPYIDDMVNKMIADGIAYESQGATVVD HHHHHHCCCHHHHHCCCCCEEEEEEEECCCCCCCCHHHHHHHHHHHHCCCCCCCCCEEEE IQQEGDTKELPPCIVRKSDGAALYATSDLATIVEREKLYHPDTYIYLADKRQELHFTQVF EECCCCCCCCCCEEEECCCCCEEEECHHHHHHHHHHHHCCCCEEEEEECCCCHHHHHHHH RTAKKAGIVAPDADMRFVGFGTMNGKDGKPFKTRSGGVMRLEHLIADIDEAVYEKIMSNR HHHHHCCCCCCCCCEEEEEEECCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHCCC TVEETEARDTAKIVGLAALKYGDLSNQASKDYVFDIERFSSFEGNTGPYILYTIVRIKSI CCCHHHHHHHHHHHHHHHHCCCCCCCCCCCCEEEEHHHHCCCCCCCCCCHHHHHHHHHHH LNKYTENGGSTNNLKIMAATEESEKNLSLSLIKFADIIDGAYRDNAPHKICQFIYEVSNA HHHHHHCCCCCCCEEEEEECCCCCCCCEEHHHHHHHHHCCHHCCCCHHHHHHHHHHHHHH FNGFYHNNKILSEPDEAKKASYIALISLTKSILEQCIDLLAIECPDRM HCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCC >Mature Secondary Structure MKTIIELITDEIKNVFAECGYDEAYAKVTVSNRPDLCEFQCNGAMAAAKAYKKAPFMIAD CHHHHHHHHHHHHHHHHHCCCCCCEEEEEECCCCCEEEEECCCHHHHHHHHHCCCCHHHH EVVAKLADNKMFSKIESVKPGFININICEDYLAGYLNEMSETEKFGYVNSESNKTVIVDY HHHHHHHCCHHHHHHHHCCCCEEEEEEHHHHHHHHHHHHHHHHHCCCEECCCCCEEEEEE GGANAAKPLHVGHLRSAVIGESVKRINTFVGNKTIGDVHLGDWGLQMGLIIEELRDRKPE CCCCCCCCCCHHHHHHHHHHHHHHHHHHHHCCCCCCCEEECCHHHHHHHHHHHHHCCCCC LPYFDDSFTGEYPEEAPFTISELEEIYPAASAKSKEDIAFAERAHEATLKLQSGDKACRA CCCCCCCCCCCCCCCCCCCHHHHHHHCCCCCCCCCHHHHHHHHHHHHEEEECCCCHHHHH IWHHIMNVSKADLKKNYDNLNVHFDLWKGESDAQPYIDDMVNKMIADGIAYESQGATVVD HHHHHHCCCHHHHHCCCCCEEEEEEEECCCCCCCCHHHHHHHHHHHHCCCCCCCCCEEEE IQQEGDTKELPPCIVRKSDGAALYATSDLATIVEREKLYHPDTYIYLADKRQELHFTQVF EECCCCCCCCCCEEEECCCCCEEEECHHHHHHHHHHHHCCCCEEEEEECCCCHHHHHHHH RTAKKAGIVAPDADMRFVGFGTMNGKDGKPFKTRSGGVMRLEHLIADIDEAVYEKIMSNR HHHHHCCCCCCCCCEEEEEEECCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHCCC TVEETEARDTAKIVGLAALKYGDLSNQASKDYVFDIERFSSFEGNTGPYILYTIVRIKSI CCCHHHHHHHHHHHHHHHHCCCCCCCCCCCCEEEEHHHHCCCCCCCCCCHHHHHHHHHHH LNKYTENGGSTNNLKIMAATEESEKNLSLSLIKFADIIDGAYRDNAPHKICQFIYEVSNA HHHHHHCCCCCCCEEEEEECCCCCCCCEEHHHHHHHHHCCHHCCCCHHHHHHHHHHHHHH FNGFYHNNKILSEPDEAKKASYIALISLTKSILEQCIDLLAIECPDRM HCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: NA