| Definition | Eubacterium eligens ATCC 27750 chromosome, complete genome. |
|---|---|
| Accession | NC_012778 |
| Length | 2,144,190 |
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The map label for this gene is pstS1 [H]
Identifier: 238916412
GI number: 238916412
Start: 479729
End: 480598
Strand: Direct
Name: pstS1 [H]
Synonym: EUBELI_00468
Alternate gene names: 238916412
Gene position: 479729-480598 (Clockwise)
Preceding gene: 238916411
Following gene: 238916413
Centisome position: 22.37
GC content: 41.03
Gene sequence:
>870_bases ATGAGAAAAGGAATTAAAAAGTTACTTACAGTTGCATTAACAGCAACATTAGGACTTGCAGCATTAGCAGGCTGTGGAAC AGGTACATCATCAAATGGAGATGGCTCAGCAAACGGAGGTACAACTAAGGAGCTTTCAGGAAAGATTCAGTTAGCAGGAA GTACATCAATGGAAAAGATGTGTGGTGCTCTCATGGAAGCATTCATGGAAGAATATCCTAATGTAACAGTAACAACAGAA TATACAGGTTCAGGCGCAGGTATTGAGTCAGTAACATCCGGAGCAGTTGATATTGGTAACGCTTCAAGAGCTTTATCTGA TAAAGAAAAGTCAGCAGGTATTGAGGAGAACATCGTAGCAATTGATGGTATCGCAATGATTACTGATAAGAACAACAAAG TTACTAATGTAACAAAGCAGCAGCTCACAGATATCTACACAGGTAAGATTACTAACTGGAAGGATCTCGGCGGTTCAGAC GAAGCTATCGTAGTAATCGGCAGAGAGGCAGCTTCTGGTACAAGAGGAGCATTTGAGGAACTTCTTGAAGTTAAGAATAA ATGTGCTTATGCACAGGAACTTGACAGTACAGGTGCTGTACTTGCCAAGGTAGCAGCAACTCCAGGTGCAATCGGATATG TTTCATTAGATGTAGTTGATAAGACAGTTGCAGCTTTAAAGCTTGATGGTGTAGATGCAACAGAGGATAACATTAAGGCT GGTAAGTATACGCTTTCAAGACCATTTGTAATGGCTACTAAGGGTTCTGTTTCATCACAGAGTGAGCTTGTTCAGACTTG GTTTAACTTCGTAAAGTCTGAAGCTGGTAAGAAGGTTATCAAGGGAGTTGGCTTAATCCTCCCAGAGTAA
Upstream 100 bases:
>100_bases AGACGACTCACATATCATTCGGTCAGGAAACTGATTCCAGCCCCTACGAAAATCTTCTGTTAATGCTTGCAAATAAAAAA CGAGGAAGGTAACGAAAGTT
Downstream 100 bases:
>100_bases GCCGGTAAATATAGATTCTGAATGGAGAGATTGACATGGAAGAGGTTATAAATGTTGGTATGAATAGAATAAATAAAACA CCAGCAGCTGTTAAGGTAAC
Product: phosphate transport system substrate-binding protein
Products: NA
Alternate protein names: PBP 1 [H]
Number of amino acids: Translated: 289; Mature: 289
Protein sequence:
>289_residues MRKGIKKLLTVALTATLGLAALAGCGTGTSSNGDGSANGGTTKELSGKIQLAGSTSMEKMCGALMEAFMEEYPNVTVTTE YTGSGAGIESVTSGAVDIGNASRALSDKEKSAGIEENIVAIDGIAMITDKNNKVTNVTKQQLTDIYTGKITNWKDLGGSD EAIVVIGREAASGTRGAFEELLEVKNKCAYAQELDSTGAVLAKVAATPGAIGYVSLDVVDKTVAALKLDGVDATEDNIKA GKYTLSRPFVMATKGSVSSQSELVQTWFNFVKSEAGKKVIKGVGLILPE
Sequences:
>Translated_289_residues MRKGIKKLLTVALTATLGLAALAGCGTGTSSNGDGSANGGTTKELSGKIQLAGSTSMEKMCGALMEAFMEEYPNVTVTTE YTGSGAGIESVTSGAVDIGNASRALSDKEKSAGIEENIVAIDGIAMITDKNNKVTNVTKQQLTDIYTGKITNWKDLGGSD EAIVVIGREAASGTRGAFEELLEVKNKCAYAQELDSTGAVLAKVAATPGAIGYVSLDVVDKTVAALKLDGVDATEDNIKA GKYTLSRPFVMATKGSVSSQSELVQTWFNFVKSEAGKKVIKGVGLILPE >Mature_289_residues MRKGIKKLLTVALTATLGLAALAGCGTGTSSNGDGSANGGTTKELSGKIQLAGSTSMEKMCGALMEAFMEEYPNVTVTTE YTGSGAGIESVTSGAVDIGNASRALSDKEKSAGIEENIVAIDGIAMITDKNNKVTNVTKQQLTDIYTGKITNWKDLGGSD EAIVVIGREAASGTRGAFEELLEVKNKCAYAQELDSTGAVLAKVAATPGAIGYVSLDVVDKTVAALKLDGVDATEDNIKA GKYTLSRPFVMATKGSVSSQSELVQTWFNFVKSEAGKKVIKGVGLILPE
Specific function: Part of the ABC transporter complex pstSACB involved in phosphate import [H]
COG id: COG0226
COG function: function code P; ABC-type phosphate transport system, periplasmic component
Gene ontology:
Cell location: Cell membrane; Lipid-anchor (Probable) [H]
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: Belongs to the pstS family [H]
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR011862 [H]
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 29875; Mature: 29875
Theoretical pI: Translated: 4.91; Mature: 4.91
Prosite motif: PS00013 PROKAR_LIPOPROTEIN
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.0 %Cys (Translated Protein) 2.4 %Met (Translated Protein) 3.5 %Cys+Met (Translated Protein) 1.0 %Cys (Mature Protein) 2.4 %Met (Mature Protein) 3.5 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MRKGIKKLLTVALTATLGLAALAGCGTGTSSNGDGSANGGTTKELSGKIQLAGSTSMEKM CCHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCEEEECCCCCHHHH CGALMEAFMEEYPNVTVTTEYTGSGAGIESVTSGAVDIGNASRALSDKEKSAGIEENIVA HHHHHHHHHHHCCCEEEEEEECCCCCCHHHHCCCCEECCCCHHHHCCHHHHCCCCCCEEE IDGIAMITDKNNKVTNVTKQQLTDIYTGKITNWKDLGGSDEAIVVIGREAASGTRGAFEE ECCEEEEECCCCCCHHHHHHHHHHHHCCCCCCHHHCCCCCCEEEEEECCCCCCCHHHHHH LLEVKNKCAYAQELDSTGAVLAKVAATPGAIGYVSLDVVDKTVAALKLDGVDATEDNIKA HHHHHHHHHHHHHHCCCHHHHHHHHCCCCCEEEEEHHHHHHHHHHEEECCCCCCCCCCCC GKYTLSRPFVMATKGSVSSQSELVQTWFNFVKSEAGKKVIKGVGLILPE CEEEECCCEEEEECCCCCHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCC >Mature Secondary Structure MRKGIKKLLTVALTATLGLAALAGCGTGTSSNGDGSANGGTTKELSGKIQLAGSTSMEKM CCHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCEEEECCCCCHHHH CGALMEAFMEEYPNVTVTTEYTGSGAGIESVTSGAVDIGNASRALSDKEKSAGIEENIVA HHHHHHHHHHHCCCEEEEEEECCCCCCHHHHCCCCEECCCCHHHHCCHHHHCCCCCCEEE IDGIAMITDKNNKVTNVTKQQLTDIYTGKITNWKDLGGSDEAIVVIGREAASGTRGAFEE ECCEEEEECCCCCCHHHHHHHHHHHHCCCCCCHHHCCCCCCEEEEEECCCCCCCHHHHHH LLEVKNKCAYAQELDSTGAVLAKVAATPGAIGYVSLDVVDKTVAALKLDGVDATEDNIKA HHHHHHHHHHHHHHCCCHHHHHHHHCCCCCEEEEEHHHHHHHHHHEEECCCCCCCCCCCC GKYTLSRPFVMATKGSVSSQSELVQTWFNFVKSEAGKKVIKGVGLILPE CEEEECCCEEEEECCCCCHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 7.0
TargetDB status: NA
Availability: NA
References: 11463916 [H]