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The map label for this gene is yesY [H]

Identifier: 238916387

GI number: 238916387

Start: 451681

End: 452634

Strand: Reverse

Name: yesY [H]

Synonym: EUBELI_00441

Alternate gene names: 238916387

Gene position: 452634-451681 (Counterclockwise)

Preceding gene: 238916391

Following gene: 238916376

Centisome position: 21.11

GC content: 38.68

Gene sequence:

>954_bases
ATGAACATTTATCTTGCTGGAGATTCTATTGTACAGAATTATACTGAAGAAGAATTTATTGCAGGCTGGGGACAGTTTCT
GCCACGCTTCTTTAAGCCTGATGTAAATGTATTTAACTATGCCAAGGGTGGCAGAAGTTCAAGACTTTTTATTAATGAAG
GAAGATTTGAAGAGATTGACAGACATATTCAGTCAGGAGACTATCTTTTTATAGAGTTTTGTCATAATGATGACGATTCA
AAGGATTACAAATCTATGTTTAACCGCCAGACTCCGCTTGGCGTACCAGATGAATCAGGTCGATTTCCTGTTATAGCAGG
AGTTAAGATGCCTAAGAATTATATACCACCTGAATATATTGAGGCACTTAATAACGATGATTCGATAACTGATAAACAGG
CTGTTCTTAACAGTGTTCTAGCCATAAACCAGTCTTATCCATATGACACTTACTATCCATACTCAAAAGACGCTTCTATG
GGCAGTTACAAATGGTTCATCAAACAGTTTATTGATATGGCAAGAAAGCATGATGCAGTTCCTGTGTTAGTTACTGCGCC
TGCAAGAACATTTTTTAATGATGACGGAACAATCATGGACGCTCCCGGCTGCCACGGCGGTAATAATTTCAGCTATATAA
GAGCTATGCGCCAGATTGGCGAAGAAACCGGCACTCCTGTACTTGACCTGTTTTCTTATTCAGTTGAACTTTTTGAAAAA
ATCGGACATGACAATATCCACAGATATACTTCAATCAAAAAAGGTATCAATAAAGGAAAATGGCCTGACGATTTCTTAAA
AGAACTTGCCAAGCCAGAAACTGTTTCTGAGAATACACATTTTAACAAGGATGGAGCAATGCTTATCACCGAAGGTCTGG
TAGAACTGATTCGTGAATCCAAGAACCCCCAGCTTTGTGAATTGCAGTCTTCCCTGCTTCATAACGTGGTATAA

Upstream 100 bases:

>100_bases
TTAACTTATTGAAAGCATTTTACTTTGCAAAACAACGGAGGCAATACCTCTGCTCCTGCATGGGCAGTCGCATTTTGCTC
CGCAAAACAAGGAGGTATGT

Downstream 100 bases:

>100_bases
GTATATTACTTATTAATGAATTCCCATGCTTCTTCGGGGCTGTGTACAACAAACTCAGCCCCGTTTTCCTTTAAGAATTC
TTCATCTCTGAAGCCCCAGC

Product: carbohydrate esterase family 12 protein

Products: NA

Alternate protein names: RGAE [H]

Number of amino acids: Translated: 317; Mature: 317

Protein sequence:

>317_residues
MNIYLAGDSIVQNYTEEEFIAGWGQFLPRFFKPDVNVFNYAKGGRSSRLFINEGRFEEIDRHIQSGDYLFIEFCHNDDDS
KDYKSMFNRQTPLGVPDESGRFPVIAGVKMPKNYIPPEYIEALNNDDSITDKQAVLNSVLAINQSYPYDTYYPYSKDASM
GSYKWFIKQFIDMARKHDAVPVLVTAPARTFFNDDGTIMDAPGCHGGNNFSYIRAMRQIGEETGTPVLDLFSYSVELFEK
IGHDNIHRYTSIKKGINKGKWPDDFLKELAKPETVSENTHFNKDGAMLITEGLVELIRESKNPQLCELQSSLLHNVV

Sequences:

>Translated_317_residues
MNIYLAGDSIVQNYTEEEFIAGWGQFLPRFFKPDVNVFNYAKGGRSSRLFINEGRFEEIDRHIQSGDYLFIEFCHNDDDS
KDYKSMFNRQTPLGVPDESGRFPVIAGVKMPKNYIPPEYIEALNNDDSITDKQAVLNSVLAINQSYPYDTYYPYSKDASM
GSYKWFIKQFIDMARKHDAVPVLVTAPARTFFNDDGTIMDAPGCHGGNNFSYIRAMRQIGEETGTPVLDLFSYSVELFEK
IGHDNIHRYTSIKKGINKGKWPDDFLKELAKPETVSENTHFNKDGAMLITEGLVELIRESKNPQLCELQSSLLHNVV
>Mature_317_residues
MNIYLAGDSIVQNYTEEEFIAGWGQFLPRFFKPDVNVFNYAKGGRSSRLFINEGRFEEIDRHIQSGDYLFIEFCHNDDDS
KDYKSMFNRQTPLGVPDESGRFPVIAGVKMPKNYIPPEYIEALNNDDSITDKQAVLNSVLAINQSYPYDTYYPYSKDASM
GSYKWFIKQFIDMARKHDAVPVLVTAPARTFFNDDGTIMDAPGCHGGNNFSYIRAMRQIGEETGTPVLDLFSYSVELFEK
IGHDNIHRYTSIKKGINKGKWPDDFLKELAKPETVSENTHFNKDGAMLITEGLVELIRESKNPQLCELQSSLLHNVV

Specific function: May play role in the degradation of rhamnogalacturonan derived from plant cell walls. Probably has broad substrate specificity and may degrade several types of acetylated substrates [H]

COG id: COG2755

COG function: function code E; Lysophospholipase L1 and related esterases

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: Belongs to the 'GDSL' lipolytic enzyme family [H]

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR013830
- InterPro:   IPR013831
- InterPro:   IPR001087 [H]

Pfam domain/function: PF00657 Lipase_GDSL [H]

EC number: NA

Molecular weight: Translated: 36183; Mature: 36183

Theoretical pI: Translated: 4.99; Mature: 4.99

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.9 %Cys     (Translated Protein)
2.5 %Met     (Translated Protein)
3.5 %Cys+Met (Translated Protein)
0.9 %Cys     (Mature Protein)
2.5 %Met     (Mature Protein)
3.5 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MNIYLAGDSIVQNYTEEEFIAGWGQFLPRFFKPDVNVFNYAKGGRSSRLFINEGRFEEID
CEEEECCHHHHHHCCHHHHHHHHHHHHHHHHCCCCCEEECCCCCCCCEEEEECCCHHHHH
RHIQSGDYLFIEFCHNDDDSKDYKSMFNRQTPLGVPDESGRFPVIAGVKMPKNYIPPEYI
HHHCCCCEEEEEEECCCCCCHHHHHHHCCCCCCCCCCCCCCCCEEECCCCCCCCCCHHHH
EALNNDDSITDKQAVLNSVLAINQSYPYDTYYPYSKDASMGSYKWFIKQFIDMARKHDAV
HHCCCCCCCHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHCCCC
PVLVTAPARTFFNDDGTIMDAPGCHGGNNFSYIRAMRQIGEETGTPVLDLFSYSVELFEK
EEEEECCCHHHCCCCCCEEECCCCCCCCCHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHH
IGHDNIHRYTSIKKGINKGKWPDDFLKELAKPETVSENTHFNKDGAMLITEGLVELIRES
HCCCHHHHHHHHHHHCCCCCCHHHHHHHHCCCCCCCCCCCCCCCCCCHHHHHHHHHHHCC
KNPQLCELQSSLLHNVV
CCCCHHHHHHHHHHHCC
>Mature Secondary Structure
MNIYLAGDSIVQNYTEEEFIAGWGQFLPRFFKPDVNVFNYAKGGRSSRLFINEGRFEEID
CEEEECCHHHHHHCCHHHHHHHHHHHHHHHHCCCCCEEECCCCCCCCEEEEECCCHHHHH
RHIQSGDYLFIEFCHNDDDSKDYKSMFNRQTPLGVPDESGRFPVIAGVKMPKNYIPPEYI
HHHCCCCEEEEEEECCCCCCHHHHHHHCCCCCCCCCCCCCCCCEEECCCCCCCCCCHHHH
EALNNDDSITDKQAVLNSVLAINQSYPYDTYYPYSKDASMGSYKWFIKQFIDMARKHDAV
HHCCCCCCCHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHCCCC
PVLVTAPARTFFNDDGTIMDAPGCHGGNNFSYIRAMRQIGEETGTPVLDLFSYSVELFEK
EEEEECCCHHHCCCCCCEEECCCCCCCCCHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHH
IGHDNIHRYTSIKKGINKGKWPDDFLKELAKPETVSENTHFNKDGAMLITEGLVELIRES
HCCCHHHHHHHHHHHCCCCCCHHHHHHHHCCCCCCCCCCCCCCCCCCHHHHHHHHHHHCC
KNPQLCELQSSLLHNVV
CCCCHHHHHHHHHHHCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 9384377 [H]