Click here to switch to the map view.

The map label for this gene is yoeC [H]

Identifier: 238916371

GI number: 238916371

Start: 436836

End: 437414

Strand: Direct

Name: yoeC [H]

Synonym: EUBELI_00424

Alternate gene names: 238916371

Gene position: 436836-437414 (Clockwise)

Preceding gene: 238916368

Following gene: 238916372

Centisome position: 20.37

GC content: 32.82

Gene sequence:

>579_bases
ATGGAGGTAAATAATATGGGAACATCTCAACCAATCAGAAGCTTGGATGAACTGACAGCTTTTCGTAGTTATTATTTAAA
TAAGGAGGTTAATCTTCGTAATTACATGCTGATATGTATGGGACTAAATACTGCATTAAGAATTAGTGATATGTTGCAGT
TAAAATGGGGGAATGTGTATGACTTTGATAGGAAACATTATGTGAAACATATTGTTGTATGCGAAGGGAAAACAGGAAAG
GAGACAAGAATAGCAATTAATAATAATCTTATAGAAGCATTTGAAATGTACATGGGAAGTTTAAAGAGTGTTTCAGGTAA
TGATTATATTTTTACTGGAAAAACAAAGGGAACGCATTTGTCACGTTCACAGGCATTCAGAATAATTACACATGTAGCGG
AAGCCCTTAATATGGAGAATGGAATAAGTTGTCATTCCTTAAGAAAAACTTTTGGATATTATGCATGGAAATATGGAACG
CCTCCGGCAATGTTAATGGAAATATATAATCATTCGTCATATGAAATTACTAAAAGATATCTGGGAATCAAACAGGATGA
CAGAGATAATGTTTTTTGA

Upstream 100 bases:

>100_bases
AATTCACCGGGTTTGATTGTGAGCTTTAACATTTCAAAACCTCCTTGCTTTCCATGACCATGCAACAAAATATTTCAAAT
TGTTGCATCCCAACAATTAC

Downstream 100 bases:

>100_bases
AAGTGAATTTATAAATATATTAATAATTAATTTTAAATTAAATTGAAATTTAGACTAAAGAATTTGATGTCGATGTCGAT
ATAACATATGAAGTTAATAA

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 192; Mature: 192

Protein sequence:

>192_residues
MEVNNMGTSQPIRSLDELTAFRSYYLNKEVNLRNYMLICMGLNTALRISDMLQLKWGNVYDFDRKHYVKHIVVCEGKTGK
ETRIAINNNLIEAFEMYMGSLKSVSGNDYIFTGKTKGTHLSRSQAFRIITHVAEALNMENGISCHSLRKTFGYYAWKYGT
PPAMLMEIYNHSSYEITKRYLGIKQDDRDNVF

Sequences:

>Translated_192_residues
MEVNNMGTSQPIRSLDELTAFRSYYLNKEVNLRNYMLICMGLNTALRISDMLQLKWGNVYDFDRKHYVKHIVVCEGKTGK
ETRIAINNNLIEAFEMYMGSLKSVSGNDYIFTGKTKGTHLSRSQAFRIITHVAEALNMENGISCHSLRKTFGYYAWKYGT
PPAMLMEIYNHSSYEITKRYLGIKQDDRDNVF
>Mature_192_residues
MEVNNMGTSQPIRSLDELTAFRSYYLNKEVNLRNYMLICMGLNTALRISDMLQLKWGNVYDFDRKHYVKHIVVCEGKTGK
ETRIAINNNLIEAFEMYMGSLKSVSGNDYIFTGKTKGTHLSRSQAFRIITHVAEALNMENGISCHSLRKTFGYYAWKYGT
PPAMLMEIYNHSSYEITKRYLGIKQDDRDNVF

Specific function: Unknown

COG id: COG0582

COG function: function code L; Integrase

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: Belongs to the 'phage' integrase family [H]

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR011010
- InterPro:   IPR013762
- InterPro:   IPR002104 [H]

Pfam domain/function: PF00589 Phage_integrase [H]

EC number: NA

Molecular weight: Translated: 22241; Mature: 22241

Theoretical pI: Translated: 9.19; Mature: 9.19

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.6 %Cys     (Translated Protein)
5.2 %Met     (Translated Protein)
6.8 %Cys+Met (Translated Protein)
1.6 %Cys     (Mature Protein)
5.2 %Met     (Mature Protein)
6.8 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MEVNNMGTSQPIRSLDELTAFRSYYLNKEVNLRNYMLICMGLNTALRISDMLQLKWGNVY
CCCCCCCCCHHHHHHHHHHHHHHHHCCCCCCCCCEEEEEECCCCHHHHHHHHEECCCCCC
DFDRKHYVKHIVVCEGKTGKETRIAINNNLIEAFEMYMGSLKSVSGNDYIFTGKTKGTHL
CCCHHHHEEEEEEECCCCCCCEEEEECCHHHHHHHHHHHHHCCCCCCCEEEECCCCCCCC
SRSQAFRIITHVAEALNMENGISCHSLRKTFGYYAWKYGTPPAMLMEIYNHSSYEITKRY
CHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHEEEECCCCHHHHHHHHCCCCHHHHHHH
LGIKQDDRDNVF
CCCCCCCCCCCC
>Mature Secondary Structure
MEVNNMGTSQPIRSLDELTAFRSYYLNKEVNLRNYMLICMGLNTALRISDMLQLKWGNVY
CCCCCCCCCHHHHHHHHHHHHHHHHCCCCCCCCCEEEEEECCCCHHHHHHHHEECCCCCC
DFDRKHYVKHIVVCEGKTGKETRIAINNNLIEAFEMYMGSLKSVSGNDYIFTGKTKGTHL
CCCHHHHEEEEEEECCCCCCCEEEEECCHHHHHHHHHHHHHCCCCCCCEEEECCCCCCCC
SRSQAFRIITHVAEALNMENGISCHSLRKTFGYYAWKYGTPPAMLMEIYNHSSYEITKRY
CHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHEEEECCCCHHHHHHHHCCCCHHHHHHH
LGIKQDDRDNVF
CCCCCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 9384377 [H]