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The map label for this gene is yhbH [C]

Identifier: 238916329

GI number: 238916329

Start: 392183

End: 392710

Strand: Direct

Name: yhbH [C]

Synonym: EUBELI_00363

Alternate gene names: 238916329

Gene position: 392183-392710 (Clockwise)

Preceding gene: 238916327

Following gene: 238916330

Centisome position: 18.29

GC content: 36.55

Gene sequence:

>528_bases
ATGAGATTTATAATTACAGGAAGAAATATTGATATAACAGAGGGATTAAAGTCAGCAGTAGAGGAGAAGCTTGGAAAGCT
TGACCGATTCTTTGCACCAGAGACAGAAGTTAATGTGACTTTAAGTGTGGAAAAAGAAAGACAGAAGATTGAGGTAACTA
TTCCGGTTAAGGGTAACATCATAAGAAGCGAGCAGGTAAGCAGCGATATGTATGTTTCAATTGATCTTGTAGAAGAGGTT
ATCGAGCGTCAGTTAAAGAAGTATAAGAATAAGATTGTTGACAAGCAGCAGAATGCAGCAGCATTTGCACAGGAATTCGT
AGAGAAAGATTATGATGATGATGAGGTTAAGATTATCAGAACCAAGAGATTTGGAATCAAGCCAATGGATCCTGAAGAAG
CATGCGTTCAGATGGAGCTTCTTGGACATAATTTCTATGTATTCTTTAATTCAGAGACAGAGGAAGTTAATGTTGTGTAT
AAGAGAAAAGGCAACACATATGGTTTGATTGAACCAGAATTAGATTAA

Upstream 100 bases:

>100_bases
GAATGTCTGATAGATTTTATAAAGAGAAGGTTGGAAAGGAATTACGATCAGATTCTTACCTCTGCCCACGATTATAAAAC
ACGTAAAGGAGTTGGACATC

Downstream 100 bases:

>100_bases
TTAGTTTAGTATTTTTTTCATATTACCACTTTCTGAAGATACCGTCTGTTGATTTAATACCAGCAGGCGGTATTTTTGCC
ATGGAATTGTTTTTAATTAA

Product: sigma-54 modulation protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 175; Mature: 175

Protein sequence:

>175_residues
MRFIITGRNIDITEGLKSAVEEKLGKLDRFFAPETEVNVTLSVEKERQKIEVTIPVKGNIIRSEQVSSDMYVSIDLVEEV
IERQLKKYKNKIVDKQQNAAAFAQEFVEKDYDDDEVKIIRTKRFGIKPMDPEEACVQMELLGHNFYVFFNSETEEVNVVY
KRKGNTYGLIEPELD

Sequences:

>Translated_175_residues
MRFIITGRNIDITEGLKSAVEEKLGKLDRFFAPETEVNVTLSVEKERQKIEVTIPVKGNIIRSEQVSSDMYVSIDLVEEV
IERQLKKYKNKIVDKQQNAAAFAQEFVEKDYDDDEVKIIRTKRFGIKPMDPEEACVQMELLGHNFYVFFNSETEEVNVVY
KRKGNTYGLIEPELD
>Mature_175_residues
MRFIITGRNIDITEGLKSAVEEKLGKLDRFFAPETEVNVTLSVEKERQKIEVTIPVKGNIIRSEQVSSDMYVSIDLVEEV
IERQLKKYKNKIVDKQQNAAAFAQEFVEKDYDDDEVKIIRTKRFGIKPMDPEEACVQMELLGHNFYVFFNSETEEVNVVY
KRKGNTYGLIEPELD

Specific function: Probably Modulates The Activity Of Sigma(54) (Rpon). [C]

COG id: COG1544

COG function: function code J; Ribosome-associated protein Y (PSrp-1)

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the ribosomal protein S30Ae family [H]

Homologues:

Organism=Escherichia coli, GI1789595, Length=92, Percent_Identity=38.0434782608696, Blast_Score=65, Evalue=2e-12,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR003489 [H]

Pfam domain/function: PF02482 Ribosomal_S30AE [H]

EC number: NA

Molecular weight: Translated: 20302; Mature: 20302

Theoretical pI: Translated: 4.63; Mature: 4.63

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.6 %Cys     (Translated Protein)
2.3 %Met     (Translated Protein)
2.9 %Cys+Met (Translated Protein)
0.6 %Cys     (Mature Protein)
2.3 %Met     (Mature Protein)
2.9 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MRFIITGRNIDITEGLKSAVEEKLGKLDRFFAPETEVNVTLSVEKERQKIEVTIPVKGNI
CEEEEECCCCCHHHHHHHHHHHHHHHHHHHCCCCCCEEEEEEEECCCEEEEEEEECCCCE
IRSEQVSSDMYVSIDLVEEVIERQLKKYKNKIVDKQQNAAAFAQEFVEKDYDDDEVKIIR
EECCCCCCCEEEEHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHCCCCCCCEEEEE
TKRFGIKPMDPEEACVQMELLGHNFYVFFNSETEEVNVVYKRKGNTYGLIEPELD
EECCCCCCCCHHHHHEEHEEECCEEEEEECCCCCEEEEEEEECCCEEEEECCCCC
>Mature Secondary Structure
MRFIITGRNIDITEGLKSAVEEKLGKLDRFFAPETEVNVTLSVEKERQKIEVTIPVKGNI
CEEEEECCCCCHHHHHHHHHHHHHHHHHHHCCCCCCEEEEEEEECCCEEEEEEEECCCCE
IRSEQVSSDMYVSIDLVEEVIERQLKKYKNKIVDKQQNAAAFAQEFVEKDYDDDEVKIIR
EECCCCCCCEEEEHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHCCCCCCCEEEEE
TKRFGIKPMDPEEACVQMELLGHNFYVFFNSETEEVNVVYKRKGNTYGLIEPELD
EECCCCCCCCHHHHHEEHEEECCEEEEEECCCCCEEEEEEEECCCEEEEECCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA