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The map label for this gene is ucpA [C]

Identifier: 238916320

GI number: 238916320

Start: 381054

End: 381818

Strand: Reverse

Name: ucpA [C]

Synonym: EUBELI_00354

Alternate gene names: 238916320

Gene position: 381818-381054 (Counterclockwise)

Preceding gene: 238916326

Following gene: 238916311

Centisome position: 17.81

GC content: 42.09

Gene sequence:

>765_bases
ATGAAACTTGCTTGTATTACCGGAGCATCTTCCGGCATTGGAAAAGAATTTGCATATCTGCTTTCAGACCTTGAATATGA
CCTGATTCTGGTCGGAAGAAACACAGACGCGCTTCACGAAATTGCTAACAATGTTGCTGTCAGATGCAAATGTATCACAT
GTGACTTGTCTGATGAGAAATCGTGCGTAAAGCTTGGAAGGAAGCTTCGTCAGTATCCACTTGATATTATGATTAATAAT
GCCGGGTTCGGAGAACTTGGTGAATTCACAGAAACTAAGCTTAAGAATGACATTAACATGATTAATGTCAATATTAAAGC
TGTGCATATACTTACAAAGGCCGTACTTCCAGGCTTTATACAGCGTGACAGGGGCTACATCATGAATGTTGCATCAAGTG
CCGGACTGCTTCCGGGTGGACCTTATATGTCTACCTATTATGCAACCAAAGCATATGTGACAAGCCTTACCACTGCAATC
CACGGGGAACTGCGCGACTTAAAGAGTAACGTTCACATAAGCATGCTCTGTCCAGGTCCTGTTGATACCAACTTCAACAA
TGTTGCCAATGTAAAGTTCGCATTATCCGGAATTCCTGCTGATTACTGCGCCTATTATGCACTTTGTAAAATGTTTACAG
GCAAACTTACCATTATTCCGACATTTACAATGAAAGCCGGAGTTTTTGGCAGCAGATTCCTGCCAAGACAGGTGCTTGCC
TTTATGACAGGTCACCAGCAGAAAAAGAAGACAGACAATATCTGA

Upstream 100 bases:

>100_bases
TCTCTGACAATACTGCGCAAGTATTTCACAGATAAATGTCTGTGAAATCAGAAAACAGAAAAATGTATGGATAGCCTAGC
GAAAAGAAAGGAGTCTTCTT

Downstream 100 bases:

>100_bases
TATGATACTGCCTGTCACTGATTTAGAATTTTTTTGAAAATATAATATTCTTTCTTTCAACAAGCATTGCCTTGTTGAAG
AACACATCAACTGCAGCCTT

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 254; Mature: 254

Protein sequence:

>254_residues
MKLACITGASSGIGKEFAYLLSDLEYDLILVGRNTDALHEIANNVAVRCKCITCDLSDEKSCVKLGRKLRQYPLDIMINN
AGFGELGEFTETKLKNDINMINVNIKAVHILTKAVLPGFIQRDRGYIMNVASSAGLLPGGPYMSTYYATKAYVTSLTTAI
HGELRDLKSNVHISMLCPGPVDTNFNNVANVKFALSGIPADYCAYYALCKMFTGKLTIIPTFTMKAGVFGSRFLPRQVLA
FMTGHQQKKKTDNI

Sequences:

>Translated_254_residues
MKLACITGASSGIGKEFAYLLSDLEYDLILVGRNTDALHEIANNVAVRCKCITCDLSDEKSCVKLGRKLRQYPLDIMINN
AGFGELGEFTETKLKNDINMINVNIKAVHILTKAVLPGFIQRDRGYIMNVASSAGLLPGGPYMSTYYATKAYVTSLTTAI
HGELRDLKSNVHISMLCPGPVDTNFNNVANVKFALSGIPADYCAYYALCKMFTGKLTIIPTFTMKAGVFGSRFLPRQVLA
FMTGHQQKKKTDNI
>Mature_254_residues
MKLACITGASSGIGKEFAYLLSDLEYDLILVGRNTDALHEIANNVAVRCKCITCDLSDEKSCVKLGRKLRQYPLDIMINN
AGFGELGEFTETKLKNDINMINVNIKAVHILTKAVLPGFIQRDRGYIMNVASSAGLLPGGPYMSTYYATKAYVTSLTTAI
HGELRDLKSNVHISMLCPGPVDTNFNNVANVKFALSGIPADYCAYYALCKMFTGKLTIIPTFTMKAGVFGSRFLPRQVLA
FMTGHQQKKKTDNI

Specific function: Unknown

COG id: COG0300

COG function: function code R; Short-chain dehydrogenases of various substrate specificities

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the short-chain dehydrogenases/reductases (SDR) family [H]

Homologues:

Organism=Homo sapiens, GI7705855, Length=197, Percent_Identity=30.4568527918782, Blast_Score=92, Evalue=6e-19,
Organism=Homo sapiens, GI20149619, Length=196, Percent_Identity=29.0816326530612, Blast_Score=82, Evalue=4e-16,
Organism=Homo sapiens, GI226371731, Length=196, Percent_Identity=27.5510204081633, Blast_Score=81, Evalue=9e-16,
Organism=Homo sapiens, GI109715829, Length=199, Percent_Identity=30.6532663316583, Blast_Score=79, Evalue=5e-15,
Organism=Homo sapiens, GI4557649, Length=262, Percent_Identity=27.0992366412214, Blast_Score=78, Evalue=8e-15,
Organism=Homo sapiens, GI7706318, Length=192, Percent_Identity=31.7708333333333, Blast_Score=75, Evalue=8e-14,
Organism=Homo sapiens, GI210032110, Length=190, Percent_Identity=28.9473684210526, Blast_Score=72, Evalue=6e-13,
Organism=Homo sapiens, GI40254992, Length=186, Percent_Identity=24.7311827956989, Blast_Score=70, Evalue=3e-12,
Organism=Homo sapiens, GI142976729, Length=190, Percent_Identity=28.4210526315789, Blast_Score=69, Evalue=3e-12,
Organism=Escherichia coli, GI87082100, Length=187, Percent_Identity=31.5508021390374, Blast_Score=84, Evalue=1e-17,
Organism=Escherichia coli, GI1787820, Length=200, Percent_Identity=30, Blast_Score=74, Evalue=1e-14,
Organism=Escherichia coli, GI1787335, Length=186, Percent_Identity=24.1935483870968, Blast_Score=64, Evalue=1e-11,
Organism=Escherichia coli, GI1786701, Length=195, Percent_Identity=29.2307692307692, Blast_Score=63, Evalue=2e-11,
Organism=Escherichia coli, GI1789208, Length=188, Percent_Identity=27.6595744680851, Blast_Score=61, Evalue=6e-11,
Organism=Caenorhabditis elegans, GI71994600, Length=200, Percent_Identity=32, Blast_Score=80, Evalue=1e-15,
Organism=Caenorhabditis elegans, GI71994604, Length=203, Percent_Identity=30.0492610837438, Blast_Score=77, Evalue=6e-15,
Organism=Caenorhabditis elegans, GI193203115, Length=190, Percent_Identity=27.8947368421053, Blast_Score=69, Evalue=2e-12,
Organism=Caenorhabditis elegans, GI25152911, Length=203, Percent_Identity=26.6009852216749, Blast_Score=69, Evalue=3e-12,
Organism=Caenorhabditis elegans, GI193203117, Length=190, Percent_Identity=27.8947368421053, Blast_Score=69, Evalue=3e-12,
Organism=Caenorhabditis elegans, GI17559552, Length=172, Percent_Identity=27.3255813953488, Blast_Score=66, Evalue=2e-11,
Organism=Caenorhabditis elegans, GI17562910, Length=202, Percent_Identity=29.2079207920792, Blast_Score=64, Evalue=6e-11,
Organism=Caenorhabditis elegans, GI17557668, Length=172, Percent_Identity=27.3255813953488, Blast_Score=64, Evalue=6e-11,
Organism=Saccharomyces cerevisiae, GI6319635, Length=180, Percent_Identity=28.3333333333333, Blast_Score=77, Evalue=3e-15,
Organism=Saccharomyces cerevisiae, GI6323882, Length=199, Percent_Identity=29.1457286432161, Blast_Score=67, Evalue=3e-12,
Organism=Drosophila melanogaster, GI161076933, Length=217, Percent_Identity=31.3364055299539, Blast_Score=100, Evalue=2e-21,
Organism=Drosophila melanogaster, GI24584748, Length=217, Percent_Identity=31.3364055299539, Blast_Score=100, Evalue=2e-21,
Organism=Drosophila melanogaster, GI24584744, Length=194, Percent_Identity=31.9587628865979, Blast_Score=94, Evalue=7e-20,
Organism=Drosophila melanogaster, GI28574402, Length=194, Percent_Identity=31.9587628865979, Blast_Score=94, Evalue=8e-20,
Organism=Drosophila melanogaster, GI24584752, Length=198, Percent_Identity=30.8080808080808, Blast_Score=86, Evalue=2e-17,
Organism=Drosophila melanogaster, GI24640442, Length=273, Percent_Identity=28.2051282051282, Blast_Score=82, Evalue=2e-16,
Organism=Drosophila melanogaster, GI24580925, Length=197, Percent_Identity=27.9187817258883, Blast_Score=79, Evalue=3e-15,
Organism=Drosophila melanogaster, GI28571526, Length=191, Percent_Identity=30.8900523560209, Blast_Score=79, Evalue=3e-15,
Organism=Drosophila melanogaster, GI21357041, Length=199, Percent_Identity=31.1557788944724, Blast_Score=77, Evalue=1e-14,
Organism=Drosophila melanogaster, GI23397609, Length=192, Percent_Identity=29.6875, Blast_Score=76, Evalue=2e-14,
Organism=Drosophila melanogaster, GI116007236, Length=196, Percent_Identity=29.0816326530612, Blast_Score=73, Evalue=2e-13,
Organism=Drosophila melanogaster, GI21358495, Length=194, Percent_Identity=27.319587628866, Blast_Score=70, Evalue=2e-12,
Organism=Drosophila melanogaster, GI24640492, Length=256, Percent_Identity=25.390625, Blast_Score=69, Evalue=2e-12,
Organism=Drosophila melanogaster, GI24648944, Length=195, Percent_Identity=28.7179487179487, Blast_Score=69, Evalue=3e-12,
Organism=Drosophila melanogaster, GI24644339, Length=193, Percent_Identity=30.0518134715026, Blast_Score=67, Evalue=1e-11,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR002198
- InterPro:   IPR002347
- InterPro:   IPR016040 [H]

Pfam domain/function: PF00106 adh_short [H]

EC number: 1.-.-.- [C]

Molecular weight: Translated: 27884; Mature: 27884

Theoretical pI: Translated: 9.02; Mature: 9.02

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

3.1 %Cys     (Translated Protein)
3.5 %Met     (Translated Protein)
6.7 %Cys+Met (Translated Protein)
3.1 %Cys     (Mature Protein)
3.5 %Met     (Mature Protein)
6.7 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MKLACITGASSGIGKEFAYLLSDLEYDLILVGRNTDALHEIANNVAVRCKCITCDLSDEK
CEEEEEECCCCCCHHHHHHHHHCCCEEEEEEECCHHHHHHHHCCCEEEEEEEEECCCCCH
SCVKLGRKLRQYPLDIMINNAGFGELGEFTETKLKNDINMINVNIKAVHILTKAVLPGFI
HHHHHHHHHHHCCEEEEEECCCCCCHHHHHHHHHHCCCEEEEEEEEHHHHHHHHHHHHHH
QRDRGYIMNVASSAGLLPGGPYMSTYYATKAYVTSLTTAIHGELRDLKSNVHISMLCPGP
HCCCCEEEEECCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHCCCEEEEEECCC
VDTNFNNVANVKFALSGIPADYCAYYALCKMFTGKLTIIPTFTMKAGVFGSRFLPRQVLA
CCCCCCCEEEEEEEEECCCHHHHHHHHHHHHHCCCEEEEEEEHHHCCCCCCCCHHHHHHH
FMTGHQQKKKTDNI
HHHCCCHHHHCCCC
>Mature Secondary Structure
MKLACITGASSGIGKEFAYLLSDLEYDLILVGRNTDALHEIANNVAVRCKCITCDLSDEK
CEEEEEECCCCCCHHHHHHHHHCCCEEEEEEECCHHHHHHHHCCCEEEEEEEEECCCCCH
SCVKLGRKLRQYPLDIMINNAGFGELGEFTETKLKNDINMINVNIKAVHILTKAVLPGFI
HHHHHHHHHHHCCEEEEEECCCCCCHHHHHHHHHHCCCEEEEEEEEHHHHHHHHHHHHHH
QRDRGYIMNVASSAGLLPGGPYMSTYYATKAYVTSLTTAIHGELRDLKSNVHISMLCPGP
HCCCCEEEEECCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHCCCEEEEEECCC
VDTNFNNVANVKFALSGIPADYCAYYALCKMFTGKLTIIPTFTMKAGVFGSRFLPRQVLA
CCCCCCCEEEEEEEEECCCHHHHHHHHHHHHHCCCEEEEEEEHHHCCCCCCCCHHHHHHH
FMTGHQQKKKTDNI
HHHCCCHHHHCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 11418146 [H]