Click here to switch to the map view.

The map label for this gene is infA [H]

Identifier: 238916288

GI number: 238916288

Start: 346560

End: 346778

Strand: Direct

Name: infA [H]

Synonym: EUBELI_00322

Alternate gene names: 238916288

Gene position: 346560-346778 (Clockwise)

Preceding gene: 238916287

Following gene: 238916289

Centisome position: 16.16

GC content: 32.42

Gene sequence:

>219_bases
ATGTCAAAGGCAGATGTAATTGAAATTGAAGGAAAGGTAGTTGAGAAATTACCTAATGCATTTTTTAAAGTAGAACTTGA
GAATGGACATCAGATACTTGCTACAATCAGTGGTAAGTTAAGAATGAACTTCATCAGAATTCTTCCTGGTGATAAGGTAA
CAATTGAGTTATCACCATACGATTTAACAAAGGGAAGAATCATTTGGAGAGATAAATAA

Upstream 100 bases:

>100_bases
GCAGAAAAGATAGAGAAAAACCTGTTTATAAGTAATGAAGAAATAAAATATGCGATTAAGCAGATTAAAACCAGTGCCAA
ATAATAGGAGGTAAACTTAT

Downstream 100 bases:

>100_bases
AAACAATAGGAATATATGTACAAAATATTCTTTATAAATTTTGTAAAATTTTCCTTGCGTTGATAGAAAAGGTTGTGCTA
TAATAGCAACCGAACTTGTC

Product: translation initiation factor IF-1

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 72; Mature: 71

Protein sequence:

>72_residues
MSKADVIEIEGKVVEKLPNAFFKVELENGHQILATISGKLRMNFIRILPGDKVTIELSPYDLTKGRIIWRDK

Sequences:

>Translated_72_residues
MSKADVIEIEGKVVEKLPNAFFKVELENGHQILATISGKLRMNFIRILPGDKVTIELSPYDLTKGRIIWRDK
>Mature_71_residues
SKADVIEIEGKVVEKLPNAFFKVELENGHQILATISGKLRMNFIRILPGDKVTIELSPYDLTKGRIIWRDK

Specific function: No specific function has so far been attributed to this initiation factor; however, it seems to stimulate more or less all the activities of the other two initiation factors, IF-2 and IF-3 [H]

COG id: COG0361

COG function: function code J; Translation initiation factor 1 (IF-1)

Gene ontology:

Cell location: Cytoplasm [H]

Metaboloic importance: Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Contains 1 S1-like domain [H]

Homologues:

Organism=Escherichia coli, GI1787110, Length=72, Percent_Identity=63.8888888888889, Blast_Score=105, Evalue=8e-25,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR012340
- InterPro:   IPR016027
- InterPro:   IPR022967
- InterPro:   IPR006196
- InterPro:   IPR004368 [H]

Pfam domain/function: PF01176 eIF-1a [H]

EC number: NA

Molecular weight: Translated: 8225; Mature: 8094

Theoretical pI: Translated: 9.80; Mature: 9.80

Prosite motif: PS50832 S1_IF1_TYPE

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
2.8 %Met     (Translated Protein)
2.8 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
1.4 %Met     (Mature Protein)
1.4 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MSKADVIEIEGKVVEKLPNAFFKVELENGHQILATISGKLRMNFIRILPGDKVTIELSPY
CCCCCEEEECCHHHHCCCCEEEEEEECCCCEEEEEECCEEEEEEEEECCCCEEEEEECCC
DLTKGRIIWRDK
CCCCCEEEEECC
>Mature Secondary Structure 
SKADVIEIEGKVVEKLPNAFFKVELENGHQILATISGKLRMNFIRILPGDKVTIELSPY
CCCCEEEECCHHHHCCCCEEEEEEECCCCEEEEEECCEEEEEEEEECCCCEEEEEECCC
DLTKGRIIWRDK
CCCCCEEEEECC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA