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The map label for this gene is fliD [H]

Identifier: 238916204

GI number: 238916204

Start: 263241

End: 265355

Strand: Direct

Name: fliD [H]

Synonym: EUBELI_00238

Alternate gene names: 238916204

Gene position: 263241-265355 (Clockwise)

Preceding gene: 238916203

Following gene: 238916205

Centisome position: 12.28

GC content: 37.45

Gene sequence:

>2115_bases
ATGGCAATAAGATTATCTGGTATGGTATCGGGTATGGATACAGAATCACTTGTTTCAGCGCTCGTATCATCATATAAGTT
AAAGAAAGACAATCTTGTTAAAGCACAGACCAAGCTTTCATGGAAGCAGGAAAAGTGGAAGACCATGAATACAAGTATTT
ATGGGTTCTATAGCGGAAAGCTTTCAAGTGCAAGATTTTCTACAAGTTATAATCTGAAGACATCAAGTGTGTCTAATGAT
AAGTATGCTAAGGTTTCTGCAAGTTCATCTGCGGTAAGCGGAACACAGAGACTTAAGGTTAAGCAGCTGGCGTCAACAGG
ATATCTTACAGGTGGACAGATTAAAGCTGCTGATGGAAGCAAGGTTACAGGTGATACTAAGATATCAGACATAGTTGGAA
CAACAGATGGTTCTATAAGTTTTAAGACTGCTTCTGGAACCAAGAGTATTGATATAACATCAGATATGAATGTTAACCAG
TTCGTATCTAAGTTAAAGGAAGCTGGCGTTAATGCAAGCTTTGATGAGAATAATGCAAGATTCTTTATAAGCTCTAAGGA
GTCAGGCAAGGATAACGATTTCTCGCTTGTGGCTAATGACTCTAACGGACTTAATGCATTACAGAAGCTTGGAATATATA
CAGTTAATGATACTGATTCAGCAGAATACAAGAGACTGGCAGCTTTAACAGAGGGCAGTGATGCATATAATACAGAACTT
GAAGGTATGTATAGTAAGATTACAGCTGAGGATACTGCCAAGAGTTATGCTGATAAGTATAATGCAGCCAAGGATAAGCT
TGATGCACTGGCAGCAGATGATACTTGGGATCATTCATTGACATTAGATGAATATGTCGCAAAGCTTAAGACAGAGACAC
CAGATATTCTTAATGCTTATGATAAGTATAAGAAGGAAAAGGTGGATTCAGAGGGCAATACAGTTAAAGATTCTGATGGC
AAAGTTGTGTACGAATATGACACAGAGGCTATGGAAAAAGATGGTGTCAAGGATGAATATGAGGCTGCGGTAAAGAAAAA
AGCGTCTAATGAATCACTGATTAAGGTGTATGATGATAATTCCAAGGTTATTGAGGATACTAAGGATTATGTAACAATCG
GCGATGATGGAAAAGCTGTGGCAGATGCTTCTAATGCCAATATATTACAGGAAGTAAACGATACTAATGCTGACAGACAG
GCTAAAGCTAAGGCATTGCTTGACTCTAAGATTGCAATGGCATCAAATGTTGCTGGTAGTGCGTCATCTTCAGGTGCTGT
CAGAATAACAGGACAGGATTCAGAGATTGAGCTTAATGGGGCAACATTTACTAACAACTCTAATAACTACTCAATCAATG
GTCTTACAATTGAGGCAATGGAAGTTACTGGTAATGATGAAGTAACTATCACAACCAACACGGATGTAGATGGCATATAT
GATATGATTAAGGGCTTCCTTAAGGATTATAACGATCTTGTCAAGTCTGTAGATGTTGCCTACAATGCGGCAAGCTCTAA
GGGCTATGAGCCTCTAACAAGTGATGAGAAAGATGCAATGTCTGATGATGAGGTTAAGAAGTGGGAAGAAAAGATTAAGG
ATTCACTTCTTAGAAAAGATTCAACACTTGGAAGCGTTCTTGATACTATGAAGAATGATATGGCAAGATCATTCAAGGTG
GGAGATAAGTCCTATTCACTTTCTAGTTTTGGAATAGCCACACTTGGATATTTTAATTCTCCAGAGAATGAAACAGGTGT
ATATCATATAGATGGTGATAAGGATGATTCTAAGACATCAGCTAATACAGATAAACTGAGAGAAATGATAGCAAGTGACC
CTGATACGGTTATATCATTCTTTTCACAGTTATCTACACAATTGTATACTGATCTTGGAAAGAAGATGGCAGCATCATCA
ACAAGTAGTGCTTATACTATATATAATGATAAGCAGATGAATACACAGTATTCAGAGTATAATACTAAGATATCAGAAGC
AGAAGATAAAGTTACTACATGGGAAGATTATTATTATAGTAAGTTCTCAGCAATGGAATCAGCATTGGCTAAGATGAATG
CGCAGTCATCATCGTTGACAGGTTTATTCAGTTAA

Upstream 100 bases:

>100_bases
AGACGAAGTTATTAAGGAGATACCTTCAGAGAAAGCTCTTGAGATGCTTGCCAAGGCATGGGAGCTTGCAGGTATCATAG
TAGATGAGAGGAGATAAGCT

Downstream 100 bases:

>100_bases
TTATAGAATATATTAAATTATGGGATATCCATATATCATGGAGGAGTTATGGCGTTTAATCAGAATATCGCACAGGAGTA
TAACCGTAATAAAATTCTTA

Product: flagellar hook-associated protein 2

Products: NA

Alternate protein names: HAP2; Filament cap protein [H]

Number of amino acids: Translated: 704; Mature: 703

Protein sequence:

>704_residues
MAIRLSGMVSGMDTESLVSALVSSYKLKKDNLVKAQTKLSWKQEKWKTMNTSIYGFYSGKLSSARFSTSYNLKTSSVSND
KYAKVSASSSAVSGTQRLKVKQLASTGYLTGGQIKAADGSKVTGDTKISDIVGTTDGSISFKTASGTKSIDITSDMNVNQ
FVSKLKEAGVNASFDENNARFFISSKESGKDNDFSLVANDSNGLNALQKLGIYTVNDTDSAEYKRLAALTEGSDAYNTEL
EGMYSKITAEDTAKSYADKYNAAKDKLDALAADDTWDHSLTLDEYVAKLKTETPDILNAYDKYKKEKVDSEGNTVKDSDG
KVVYEYDTEAMEKDGVKDEYEAAVKKKASNESLIKVYDDNSKVIEDTKDYVTIGDDGKAVADASNANILQEVNDTNADRQ
AKAKALLDSKIAMASNVAGSASSSGAVRITGQDSEIELNGATFTNNSNNYSINGLTIEAMEVTGNDEVTITTNTDVDGIY
DMIKGFLKDYNDLVKSVDVAYNAASSKGYEPLTSDEKDAMSDDEVKKWEEKIKDSLLRKDSTLGSVLDTMKNDMARSFKV
GDKSYSLSSFGIATLGYFNSPENETGVYHIDGDKDDSKTSANTDKLREMIASDPDTVISFFSQLSTQLYTDLGKKMAASS
TSSAYTIYNDKQMNTQYSEYNTKISEAEDKVTTWEDYYYSKFSAMESALAKMNAQSSSLTGLFS

Sequences:

>Translated_704_residues
MAIRLSGMVSGMDTESLVSALVSSYKLKKDNLVKAQTKLSWKQEKWKTMNTSIYGFYSGKLSSARFSTSYNLKTSSVSND
KYAKVSASSSAVSGTQRLKVKQLASTGYLTGGQIKAADGSKVTGDTKISDIVGTTDGSISFKTASGTKSIDITSDMNVNQ
FVSKLKEAGVNASFDENNARFFISSKESGKDNDFSLVANDSNGLNALQKLGIYTVNDTDSAEYKRLAALTEGSDAYNTEL
EGMYSKITAEDTAKSYADKYNAAKDKLDALAADDTWDHSLTLDEYVAKLKTETPDILNAYDKYKKEKVDSEGNTVKDSDG
KVVYEYDTEAMEKDGVKDEYEAAVKKKASNESLIKVYDDNSKVIEDTKDYVTIGDDGKAVADASNANILQEVNDTNADRQ
AKAKALLDSKIAMASNVAGSASSSGAVRITGQDSEIELNGATFTNNSNNYSINGLTIEAMEVTGNDEVTITTNTDVDGIY
DMIKGFLKDYNDLVKSVDVAYNAASSKGYEPLTSDEKDAMSDDEVKKWEEKIKDSLLRKDSTLGSVLDTMKNDMARSFKV
GDKSYSLSSFGIATLGYFNSPENETGVYHIDGDKDDSKTSANTDKLREMIASDPDTVISFFSQLSTQLYTDLGKKMAASS
TSSAYTIYNDKQMNTQYSEYNTKISEAEDKVTTWEDYYYSKFSAMESALAKMNAQSSSLTGLFS
>Mature_703_residues
AIRLSGMVSGMDTESLVSALVSSYKLKKDNLVKAQTKLSWKQEKWKTMNTSIYGFYSGKLSSARFSTSYNLKTSSVSNDK
YAKVSASSSAVSGTQRLKVKQLASTGYLTGGQIKAADGSKVTGDTKISDIVGTTDGSISFKTASGTKSIDITSDMNVNQF
VSKLKEAGVNASFDENNARFFISSKESGKDNDFSLVANDSNGLNALQKLGIYTVNDTDSAEYKRLAALTEGSDAYNTELE
GMYSKITAEDTAKSYADKYNAAKDKLDALAADDTWDHSLTLDEYVAKLKTETPDILNAYDKYKKEKVDSEGNTVKDSDGK
VVYEYDTEAMEKDGVKDEYEAAVKKKASNESLIKVYDDNSKVIEDTKDYVTIGDDGKAVADASNANILQEVNDTNADRQA
KAKALLDSKIAMASNVAGSASSSGAVRITGQDSEIELNGATFTNNSNNYSINGLTIEAMEVTGNDEVTITTNTDVDGIYD
MIKGFLKDYNDLVKSVDVAYNAASSKGYEPLTSDEKDAMSDDEVKKWEEKIKDSLLRKDSTLGSVLDTMKNDMARSFKVG
DKSYSLSSFGIATLGYFNSPENETGVYHIDGDKDDSKTSANTDKLREMIASDPDTVISFFSQLSTQLYTDLGKKMAASST
SSAYTIYNDKQMNTQYSEYNTKISEAEDKVTTWEDYYYSKFSAMESALAKMNAQSSSLTGLFS

Specific function: Required for the morphogenesis and for the elongation of the flagellar filament by facilitating polymerization of the flagellin monomers at the tip of growing filament. Forms a capping structure, which prevents flagellin subunits (transported through the

COG id: COG1345

COG function: function code N; Flagellar capping protein

Gene ontology:

Cell location: Secreted. Bacterial flagellum [H]

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: Belongs to the fliD family [H]

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR010810
- InterPro:   IPR010809
- InterPro:   IPR003481 [H]

Pfam domain/function: PF07196 Flagellin_IN; PF07195 FliD_C; PF02465 FliD_N [H]

EC number: NA

Molecular weight: Translated: 76681; Mature: 76550

Theoretical pI: Translated: 4.51; Mature: 4.51

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
2.6 %Met     (Translated Protein)
2.6 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
2.4 %Met     (Mature Protein)
2.4 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MAIRLSGMVSGMDTESLVSALVSSYKLKKDNLVKAQTKLSWKQEKWKTMNTSIYGFYSGK
CEEEECCCCCCCCHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHCCCCEEEEEECCC
LSSARFSTSYNLKTSSVSNDKYAKVSASSSAVSGTQRLKVKQLASTGYLTGGQIKAADGS
CCCCEECEECCEEECCCCCCCEEEEECCCHHHCCHHHHHHHHHHHCCCCCCCEEEECCCC
KVTGDTKISDIVGTTDGSISFKTASGTKSIDITSDMNVNQFVSKLKEAGVNASFDENNAR
CCCCCCCHHHHCCCCCCCEEEEECCCCCEEEECCCCCHHHHHHHHHHCCCCCCCCCCCCE
FFISSKESGKDNDFSLVANDSNGLNALQKLGIYTVNDTDSAEYKRLAALTEGSDAYNTEL
EEEECCCCCCCCCEEEEECCCCHHHHHHHCCCEEECCCCCHHHHHHHHHCCCCCCCCCHH
EGMYSKITAEDTAKSYADKYNAAKDKLDALAADDTWDHSLTLDEYVAKLKTETPDILNAY
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCHHHHHHHHCCCCCHHHHHH
DKYKKEKVDSEGNTVKDSDGKVVYEYDTEAMEKDGVKDEYEAAVKKKASNESLIKVYDDN
HHHHHHHCCCCCCEEECCCCCEEEEECCHHHHHCCCCHHHHHHHHHCCCCCCEEEEECCC
SKVIEDTKDYVTIGDDGKAVADASNANILQEVNDTNADRQAKAKALLDSKIAMASNVAGS
CCEECCCCCEEEECCCCCEEECCCCCHHHHHHCCCCCHHHHHHHHHHHHHHHHHHCCCCC
ASSSGAVRITGQDSEIELNGATFTNNSNNYSINGLTIEAMEVTGNDEVTITTNTDVDGIY
CCCCCEEEEECCCCEEEECCCEEECCCCCEEEEEEEEEEEEECCCCEEEEEECCCHHHHH
DMIKGFLKDYNDLVKSVDVAYNAASSKGYEPLTSDEKDAMSDDEVKKWEEKIKDSLLRKD
HHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCHHCCCCHHHHHHHHHHHHHHHHCC
STLGSVLDTMKNDMARSFKVGDKSYSLSSFGIATLGYFNSPENETGVYHIDGDKDDSKTS
CHHHHHHHHHHHHHHHHHCCCCCCCCCHHCCEEEEECCCCCCCCCCEEEECCCCCCCCCC
ANTDKLREMIASDPDTVISFFSQLSTQLYTDLGKKMAASSTSSAYTIYNDKQMNTQYSEY
CCHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCEEEEECCCCCCCCHHHH
NTKISEAEDKVTTWEDYYYSKFSAMESALAKMNAQSSSLTGLFS
CCCHHHHHCCCCCHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCC
>Mature Secondary Structure 
AIRLSGMVSGMDTESLVSALVSSYKLKKDNLVKAQTKLSWKQEKWKTMNTSIYGFYSGK
EEEECCCCCCCCHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHCCCCEEEEEECCC
LSSARFSTSYNLKTSSVSNDKYAKVSASSSAVSGTQRLKVKQLASTGYLTGGQIKAADGS
CCCCEECEECCEEECCCCCCCEEEEECCCHHHCCHHHHHHHHHHHCCCCCCCEEEECCCC
KVTGDTKISDIVGTTDGSISFKTASGTKSIDITSDMNVNQFVSKLKEAGVNASFDENNAR
CCCCCCCHHHHCCCCCCCEEEEECCCCCEEEECCCCCHHHHHHHHHHCCCCCCCCCCCCE
FFISSKESGKDNDFSLVANDSNGLNALQKLGIYTVNDTDSAEYKRLAALTEGSDAYNTEL
EEEECCCCCCCCCEEEEECCCCHHHHHHHCCCEEECCCCCHHHHHHHHHCCCCCCCCCHH
EGMYSKITAEDTAKSYADKYNAAKDKLDALAADDTWDHSLTLDEYVAKLKTETPDILNAY
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCHHHHHHHHCCCCCHHHHHH
DKYKKEKVDSEGNTVKDSDGKVVYEYDTEAMEKDGVKDEYEAAVKKKASNESLIKVYDDN
HHHHHHHCCCCCCEEECCCCCEEEEECCHHHHHCCCCHHHHHHHHHCCCCCCEEEEECCC
SKVIEDTKDYVTIGDDGKAVADASNANILQEVNDTNADRQAKAKALLDSKIAMASNVAGS
CCEECCCCCEEEECCCCCEEECCCCCHHHHHHCCCCCHHHHHHHHHHHHHHHHHHCCCCC
ASSSGAVRITGQDSEIELNGATFTNNSNNYSINGLTIEAMEVTGNDEVTITTNTDVDGIY
CCCCCEEEEECCCCEEEECCCEEECCCCCEEEEEEEEEEEEECCCCEEEEEECCCHHHHH
DMIKGFLKDYNDLVKSVDVAYNAASSKGYEPLTSDEKDAMSDDEVKKWEEKIKDSLLRKD
HHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCHHCCCCHHHHHHHHHHHHHHHHCC
STLGSVLDTMKNDMARSFKVGDKSYSLSSFGIATLGYFNSPENETGVYHIDGDKDDSKTS
CHHHHHHHHHHHHHHHHHCCCCCCCCCHHCCEEEEECCCCCCCCCCEEEECCCCCCCCCC
ANTDKLREMIASDPDTVISFFSQLSTQLYTDLGKKMAASSTSSAYTIYNDKQMNTQYSEY
CCHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCEEEEECCCCCCCCHHHH
NTKISEAEDKVTTWEDYYYSKFSAMESALAKMNAQSSSLTGLFS
CCCHHHHHCCCCCHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: 8195064; 9384377 [H]