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The map label for this gene is zntR [C]

Identifier: 238916144

GI number: 238916144

Start: 208340

End: 208777

Strand: Reverse

Name: zntR [C]

Synonym: EUBELI_00178

Alternate gene names: 238916144

Gene position: 208777-208340 (Counterclockwise)

Preceding gene: 238916148

Following gene: 238916143

Centisome position: 9.74

GC content: 40.87

Gene sequence:

>438_bases
ATGTACACAATAGGACAGGTTTCAGAAATGTTTAATCTTCCCGTTTCAACATTAAGATATTATGATAAAGAAGGATTATT
CCCTTTTATGCAGCGTGCTTCTGGAATAAGACAGTTCTCTGACACTGAAATTGCTGCTCTTAAGCTTATTGAATGTCTCA
AAAAATCAGGTCTTGAAATCCGCGACATCAAGCAGTTTATGGAATGGTGTCAGGAAGGCAGCAGAACTTACGAACTCAGA
AAACAGCTTTTTGAGAGACAGAAAGCTGCTGTTGAGAAAGAGATGGAGAAGATGCAGGAAACTCTTGATATGCTTACTTT
CAAGTGCTTCTATTACGAGCAGGCTATCAAGGACGGCAACGAGGACGGAATACATTCAATGCTTCCAGACAAGCTCCCCG
CCAATATTCAGGCTGCCTACGACAACTCACACAAATAA

Upstream 100 bases:

>100_bases
TTAGGTCAACCCAATAACAGTGAACATTTTGTGAATTTTATTATCACATTTGTAAAAAACTAATATCAGGTAAGCATAGC
TTACAGAAAGCAGGTGTGTT

Downstream 100 bases:

>100_bases
TTATTATTTGCTTATTATATTTAACACAAAATATGGAGGCTAATATATGTTCAAATCTTTAGAAGTTAAATATCCTAAGT
TTTATCAGGTATTCAGATTC

Product: MerR family transcriptional regulator

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 145; Mature: 145

Protein sequence:

>145_residues
MYTIGQVSEMFNLPVSTLRYYDKEGLFPFMQRASGIRQFSDTEIAALKLIECLKKSGLEIRDIKQFMEWCQEGSRTYELR
KQLFERQKAAVEKEMEKMQETLDMLTFKCFYYEQAIKDGNEDGIHSMLPDKLPANIQAAYDNSHK

Sequences:

>Translated_145_residues
MYTIGQVSEMFNLPVSTLRYYDKEGLFPFMQRASGIRQFSDTEIAALKLIECLKKSGLEIRDIKQFMEWCQEGSRTYELR
KQLFERQKAAVEKEMEKMQETLDMLTFKCFYYEQAIKDGNEDGIHSMLPDKLPANIQAAYDNSHK
>Mature_145_residues
MYTIGQVSEMFNLPVSTLRYYDKEGLFPFMQRASGIRQFSDTEIAALKLIECLKKSGLEIRDIKQFMEWCQEGSRTYELR
KQLFERQKAAVEKEMEKMQETLDMLTFKCFYYEQAIKDGNEDGIHSMLPDKLPANIQAAYDNSHK

Specific function: Zinc-Responsive Transcriptional Regulator Of Znta. [C]

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Contains 1 HTH merR-type DNA-binding domain [H]

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR009061
- InterPro:   IPR000551
- InterPro:   IPR015358 [H]

Pfam domain/function: PF00376 MerR; PF09278 MerR-DNA-bind [H]

EC number: NA

Molecular weight: Translated: 17030; Mature: 17030

Theoretical pI: Translated: 5.34; Mature: 5.34

Prosite motif: PS50937 HTH_MERR_2

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

2.1 %Cys     (Translated Protein)
5.5 %Met     (Translated Protein)
7.6 %Cys+Met (Translated Protein)
2.1 %Cys     (Mature Protein)
5.5 %Met     (Mature Protein)
7.6 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MYTIGQVSEMFNLPVSTLRYYDKEGLFPFMQRASGIRQFSDTEIAALKLIECLKKSGLEI
CCCHHHHHHHHHCCHHHHHHHCCCCCHHHHHHHHHHHHHCCHHHHHHHHHHHHHHCCCCH
RDIKQFMEWCQEGSRTYELRKQLFERQKAAVEKEMEKMQETLDMLTFKCFYYEQAIKDGN
HHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCC
EDGIHSMLPDKLPANIQAAYDNSHK
CCCHHHHCCCCCCCCHHHCCCCCCC
>Mature Secondary Structure
MYTIGQVSEMFNLPVSTLRYYDKEGLFPFMQRASGIRQFSDTEIAALKLIECLKKSGLEI
CCCHHHHHHHHHCCHHHHHHHCCCCCHHHHHHHHHHHHHCCHHHHHHHHHHHHHHCCCCH
RDIKQFMEWCQEGSRTYELRKQLFERQKAAVEKEMEKMQETLDMLTFKCFYYEQAIKDGN
HHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCC
EDGIHSMLPDKLPANIQAAYDNSHK
CCCHHHHCCCCCCCCHHHCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: DNA [C]

Specific reaction: Protein + DNA = Protein-DNA [C]

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 7542800 [H]