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The map label for this gene is ybfF [C]

Identifier: 238916111

GI number: 238916111

Start: 169464

End: 170204

Strand: Direct

Name: ybfF [C]

Synonym: EUBELI_00145

Alternate gene names: 238916111

Gene position: 169464-170204 (Clockwise)

Preceding gene: 238916109

Following gene: 238916112

Centisome position: 7.9

GC content: 38.06

Gene sequence:

>741_bases
ATGGTTAATCTGGATGGGATGCTGTCAATAGTTATGCCAGCTTATAATGAGGAAAAGCTTATATATAACAGTATTAAAGA
AACACTCAGAATTGTTGAAAAGTTTGTTCCAGAATTAGAGATAGTTGTGGTTAATGATGGCAGCAGGGACAATACGAAAT
CTGAAATTGAAAAAGCAGTTAAAGAGGACGACAGAGTGCGTATGATAAGTTCTACCAAGAACAGAGGCAAAGGTAATGCT
ATAATTGCCGGTGTTTCACAGGTGGAAGGAAAGTATGTTGCATTTGTTGATGCAGATCTCGAATTGAATCCATCACAGCT
TGAAGGTTATCTTCAAAAAATGCTTGACGATAATAAAGATGTTGTAATTGGATGCAAGTTCCATAAGGATTCCAAGCTGG
ATTATCCATTTAAGAGAAAGGTTATAAGCATGGGGTATTACATAATGCTGCTTGTGATGTTTCATCTTAATGTAAGGGAT
ACACAGACAGGGCTTAAGGTATTCCGAGTGGAGGCAATCAAGCCGGTGGCACATCTTGTCAGGACATCAGGATTTGCCTA
TGATATAGAGCTTCTGGTTGCTATACACAGAAGAGGTTTTACGATTGCACAGATGCCAGTTGAAGTTGTATATGTCAGAG
ATTCGGGTAGCCGACGAATAGGTATGAAAGATATATGGCAGGCATTTATTGATACATGGGCAATATTTGGAAGAGTGTAC
TTTAAGCATTATTATGATTAA

Upstream 100 bases:

>100_bases
ATCTTCTAATATTATCTGCGTTAATTACGTGTCTATACTTGAAAAAGTCATCATAGCATTGTAATATTAATGAATGTGCA
GACACGAGAGGGGAATTTCA

Downstream 100 bases:

>100_bases
AATACATGTGGTTTAGGAGAATTAGGAGATACGATTAAGAATGAAAGGATTTATTGAAGGTTTAGCAGGTAAGTTAGCAG
TAGTATGGAAGTCAGTATTT

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 246; Mature: 246

Protein sequence:

>246_residues
MVNLDGMLSIVMPAYNEEKLIYNSIKETLRIVEKFVPELEIVVVNDGSRDNTKSEIEKAVKEDDRVRMISSTKNRGKGNA
IIAGVSQVEGKYVAFVDADLELNPSQLEGYLQKMLDDNKDVVIGCKFHKDSKLDYPFKRKVISMGYYIMLLVMFHLNVRD
TQTGLKVFRVEAIKPVAHLVRTSGFAYDIELLVAIHRRGFTIAQMPVEVVYVRDSGSRRIGMKDIWQAFIDTWAIFGRVY
FKHYYD

Sequences:

>Translated_246_residues
MVNLDGMLSIVMPAYNEEKLIYNSIKETLRIVEKFVPELEIVVVNDGSRDNTKSEIEKAVKEDDRVRMISSTKNRGKGNA
IIAGVSQVEGKYVAFVDADLELNPSQLEGYLQKMLDDNKDVVIGCKFHKDSKLDYPFKRKVISMGYYIMLLVMFHLNVRD
TQTGLKVFRVEAIKPVAHLVRTSGFAYDIELLVAIHRRGFTIAQMPVEVVYVRDSGSRRIGMKDIWQAFIDTWAIFGRVY
FKHYYD
>Mature_246_residues
MVNLDGMLSIVMPAYNEEKLIYNSIKETLRIVEKFVPELEIVVVNDGSRDNTKSEIEKAVKEDDRVRMISSTKNRGKGNA
IIAGVSQVEGKYVAFVDADLELNPSQLEGYLQKMLDDNKDVVIGCKFHKDSKLDYPFKRKVISMGYYIMLLVMFHLNVRD
TQTGLKVFRVEAIKPVAHLVRTSGFAYDIELLVAIHRRGFTIAQMPVEVVYVRDSGSRRIGMKDIWQAFIDTWAIFGRVY
FKHYYD

Specific function: Unknown

COG id: COG0463

COG function: function code M; Glycosyltransferases involved in cell wall biogenesis

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

Organism=Homo sapiens, GI7019323, Length=223, Percent_Identity=30.9417040358744, Blast_Score=92, Evalue=5e-19,
Organism=Homo sapiens, GI4503363, Length=220, Percent_Identity=24.5454545454545, Blast_Score=89, Evalue=4e-18,
Organism=Homo sapiens, GI215276969, Length=216, Percent_Identity=28.2407407407407, Blast_Score=74, Evalue=1e-13,
Organism=Escherichia coli, GI1788588, Length=116, Percent_Identity=33.6206896551724, Blast_Score=68, Evalue=4e-13,
Organism=Escherichia coli, GI1790044, Length=123, Percent_Identity=36.5853658536585, Blast_Score=65, Evalue=4e-12,
Organism=Escherichia coli, GI1788692, Length=142, Percent_Identity=31.6901408450704, Blast_Score=62, Evalue=5e-11,
Organism=Caenorhabditis elegans, GI25146207, Length=259, Percent_Identity=25.8687258687259, Blast_Score=80, Evalue=1e-15,
Organism=Caenorhabditis elegans, GI71999402, Length=222, Percent_Identity=22.5225225225225, Blast_Score=74, Evalue=5e-14,
Organism=Saccharomyces cerevisiae, GI6325029, Length=220, Percent_Identity=29.5454545454545, Blast_Score=97, Evalue=2e-21,
Organism=Drosophila melanogaster, GI24585265, Length=223, Percent_Identity=27.3542600896861, Blast_Score=95, Evalue=3e-20,
Organism=Drosophila melanogaster, GI24582769, Length=248, Percent_Identity=27.4193548387097, Blast_Score=87, Evalue=1e-17,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR001173 [H]

Pfam domain/function: PF00535 Glycos_transf_2 [H]

EC number: NA

Molecular weight: Translated: 28272; Mature: 28272

Theoretical pI: Translated: 8.79; Mature: 8.79

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.4 %Cys     (Translated Protein)
4.1 %Met     (Translated Protein)
4.5 %Cys+Met (Translated Protein)
0.4 %Cys     (Mature Protein)
4.1 %Met     (Mature Protein)
4.5 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MVNLDGMLSIVMPAYNEEKLIYNSIKETLRIVEKFVPELEIVVVNDGSRDNTKSEIEKAV
CCCCCCHHHEEECCCCCCHHHHHHHHHHHHHHHHHCCCEEEEEEECCCCCCCHHHHHHHH
KEDDRVRMISSTKNRGKGNAIIAGVSQVEGKYVAFVDADLELNPSQLEGYLQKMLDDNKD
CCCCCEEEECCCCCCCCCCEEEEEHHHCCCCEEEEEECCCCCCHHHHHHHHHHHHCCCCC
VVIGCKFHKDSKLDYPFKRKVISMGYYIMLLVMFHLNVRDTQTGLKVFRVEAIKPVAHLV
EEEEEEECCCCCCCCHHHHHHHHHHHHHHHHHHHHCCCCCCHHCCEEEEHHHHHHHHHHH
RTSGFAYDIELLVAIHRRGFTIAQMPVEVVYVRDSGSRRIGMKDIWQAFIDTWAIFGRVY
HHCCCHHHHHHHHHHHHCCCEEEECCEEEEEEECCCCCCCCHHHHHHHHHHHHHHHHHHH
FKHYYD
HHHCCC
>Mature Secondary Structure
MVNLDGMLSIVMPAYNEEKLIYNSIKETLRIVEKFVPELEIVVVNDGSRDNTKSEIEKAV
CCCCCCHHHEEECCCCCCHHHHHHHHHHHHHHHHHCCCEEEEEEECCCCCCCHHHHHHHH
KEDDRVRMISSTKNRGKGNAIIAGVSQVEGKYVAFVDADLELNPSQLEGYLQKMLDDNKD
CCCCCEEEECCCCCCCCCCEEEEEHHHCCCCEEEEEECCCCCCHHHHHHHHHHHHCCCCC
VVIGCKFHKDSKLDYPFKRKVISMGYYIMLLVMFHLNVRDTQTGLKVFRVEAIKPVAHLV
EEEEEEECCCCCCCCHHHHHHHHHHHHHHHHHHHHCCCCCCHHCCEEEEHHHHHHHHHHH
RTSGFAYDIELLVAIHRRGFTIAQMPVEVVYVRDSGSRRIGMKDIWQAFIDTWAIFGRVY
HHCCCHHHHHHHHHHHHCCCEEEECCEEEEEEECCCCCCCCHHHHHHHHHHHHHHHHHHH
FKHYYD
HHHCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 8688087 [H]