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The map label for this gene is ytrB [H]

Identifier: 238916108

GI number: 238916108

Start: 165881

End: 166792

Strand: Direct

Name: ytrB [H]

Synonym: EUBELI_00142

Alternate gene names: 238916108

Gene position: 165881-166792 (Clockwise)

Preceding gene: 238916107

Following gene: 238916109

Centisome position: 7.74

GC content: 37.94

Gene sequence:

>912_bases
ATGATAGAGGTAAAAGGTGTTACTAAATCATTTGATGACTTTACAGCACTTGACAATGTTACCTGTAATATAGCGGAGGG
CTGTATATATGGTATGGTTGGTTCTAACGGTGCAGGAAAGTCTACGCTGCTAAGAGTTCTGTCAGGTATATATAAGGCAG
ATAAGGGAGAAGCAATAATCGATGGAATTAATGTATATGAGAATACATACATGAAGAATAAGCTGGTGTTCGTTGCAGAT
GAATTATTCTTTCTTGCAGGTGCGAACATGAAGAGCATGGCTAAGTTCTATAGTTCAATATATGATAATTTTGATATGGA
CAGATTCGCAGAACTTACGAAAACATTTGGACTTGATCCATCTAAGAGTATATCAAACTTTTCAAAAGGAATGAAGAGAC
AGGCAGCTATAATACTTGCGCTTTCAACAAGAGCTAAGTATATGTTCTTTGATGAAACATTTGACGGACTTGATCCTGTT
ATGCGTAATCTTGTCAAGAAGTTAATATGTGGTGATGTTGCAGAAAATAACGCTACTGTTATAGTCACATCACATTCATT
AAGAGAATTGGAAGACTTATGCGATCATTTGTCACTTCTTCATAAAGGCGGGCTGGTGCTTGACAGCGATGTATTTGAAC
TAAAGACGAGTCAGTTCAAGGTACAGGTAGCTTTTAAGGATGATTTTGATGAGAGTAAGTTTGAGGGCATTAGAATTACA
AGATACCGTCAGGAGGGGTCAGTTGCCAACATGATAGTAAGTGGCGACAGGGAACAGACCATGGACATTATAAATGCCAT
GAATCCGGTAGTATTTGATGTCCTCCCACTTACGCTTGAAGAAGTATTTACTTATGAGATGGAAGCACTTGGTTATACAT
TTGATGTGAAGGGGGATAAGACGCATGAATAA

Upstream 100 bases:

>100_bases
AAAAGCTGTCAGATCTTAAGGAGATTGTAAGAAAGCTTGCATACGCAGGGGTGAGTAAGAGTGAGATAACAGATATGATT
GAGGAGGTTTATAAGAAAAT

Downstream 100 bases:

>100_bases
TAAGAAAGTATTCAGCTTTCATATGTTTTTACAGACATTGAAGCAGACAAGACTTGCGGGCTTTATAATGATGGCGGTAA
TTACACTTATATCAGTTGTA

Product: antibiotic transport system ATP-binding protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 303; Mature: 303

Protein sequence:

>303_residues
MIEVKGVTKSFDDFTALDNVTCNIAEGCIYGMVGSNGAGKSTLLRVLSGIYKADKGEAIIDGINVYENTYMKNKLVFVAD
ELFFLAGANMKSMAKFYSSIYDNFDMDRFAELTKTFGLDPSKSISNFSKGMKRQAAIILALSTRAKYMFFDETFDGLDPV
MRNLVKKLICGDVAENNATVIVTSHSLRELEDLCDHLSLLHKGGLVLDSDVFELKTSQFKVQVAFKDDFDESKFEGIRIT
RYRQEGSVANMIVSGDREQTMDIINAMNPVVFDVLPLTLEEVFTYEMEALGYTFDVKGDKTHE

Sequences:

>Translated_303_residues
MIEVKGVTKSFDDFTALDNVTCNIAEGCIYGMVGSNGAGKSTLLRVLSGIYKADKGEAIIDGINVYENTYMKNKLVFVAD
ELFFLAGANMKSMAKFYSSIYDNFDMDRFAELTKTFGLDPSKSISNFSKGMKRQAAIILALSTRAKYMFFDETFDGLDPV
MRNLVKKLICGDVAENNATVIVTSHSLRELEDLCDHLSLLHKGGLVLDSDVFELKTSQFKVQVAFKDDFDESKFEGIRIT
RYRQEGSVANMIVSGDREQTMDIINAMNPVVFDVLPLTLEEVFTYEMEALGYTFDVKGDKTHE
>Mature_303_residues
MIEVKGVTKSFDDFTALDNVTCNIAEGCIYGMVGSNGAGKSTLLRVLSGIYKADKGEAIIDGINVYENTYMKNKLVFVAD
ELFFLAGANMKSMAKFYSSIYDNFDMDRFAELTKTFGLDPSKSISNFSKGMKRQAAIILALSTRAKYMFFDETFDGLDPV
MRNLVKKLICGDVAENNATVIVTSHSLRELEDLCDHLSLLHKGGLVLDSDVFELKTSQFKVQVAFKDDFDESKFEGIRIT
RYRQEGSVANMIVSGDREQTMDIINAMNPVVFDVLPLTLEEVFTYEMEALGYTFDVKGDKTHE

Specific function: Part of the ABC transporter complex YtrBCDEF that plays a role in acetoin utilization during stationary phase and sporulation [H]

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cell membrane; Peripheral membrane protein; Cytoplasmic side (Potential) [H]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Contains 1 ABC transporter domain [H]

Homologues:

Organism=Homo sapiens, GI27881501, Length=223, Percent_Identity=29.5964125560538, Blast_Score=88, Evalue=1e-17,
Organism=Homo sapiens, GI30795238, Length=223, Percent_Identity=29.5964125560538, Blast_Score=88, Evalue=1e-17,
Organism=Homo sapiens, GI45446740, Length=226, Percent_Identity=26.1061946902655, Blast_Score=79, Evalue=3e-15,
Organism=Homo sapiens, GI47078218, Length=226, Percent_Identity=26.1061946902655, Blast_Score=79, Evalue=3e-15,
Organism=Homo sapiens, GI27436953, Length=205, Percent_Identity=25.8536585365854, Blast_Score=77, Evalue=3e-14,
Organism=Homo sapiens, GI116734710, Length=223, Percent_Identity=27.3542600896861, Blast_Score=76, Evalue=4e-14,
Organism=Homo sapiens, GI153792144, Length=209, Percent_Identity=23.444976076555, Blast_Score=75, Evalue=8e-14,
Organism=Homo sapiens, GI21536376, Length=233, Percent_Identity=24.8927038626609, Blast_Score=73, Evalue=4e-13,
Organism=Escherichia coli, GI87081782, Length=223, Percent_Identity=28.2511210762332, Blast_Score=102, Evalue=3e-23,
Organism=Escherichia coli, GI48994943, Length=220, Percent_Identity=28.6363636363636, Blast_Score=95, Evalue=7e-21,
Organism=Escherichia coli, GI1787029, Length=230, Percent_Identity=27.8260869565217, Blast_Score=91, Evalue=7e-20,
Organism=Escherichia coli, GI1786398, Length=230, Percent_Identity=26.9565217391304, Blast_Score=84, Evalue=9e-18,
Organism=Escherichia coli, GI87081791, Length=237, Percent_Identity=21.9409282700422, Blast_Score=83, Evalue=2e-17,
Organism=Escherichia coli, GI1788472, Length=231, Percent_Identity=27.7056277056277, Blast_Score=81, Evalue=1e-16,
Organism=Escherichia coli, GI48995001, Length=232, Percent_Identity=28.0172413793103, Blast_Score=80, Evalue=2e-16,
Organism=Escherichia coli, GI1788450, Length=225, Percent_Identity=23.1111111111111, Blast_Score=73, Evalue=2e-14,
Organism=Escherichia coli, GI1790190, Length=233, Percent_Identity=25.7510729613734, Blast_Score=72, Evalue=5e-14,
Organism=Escherichia coli, GI87081709, Length=227, Percent_Identity=24.6696035242291, Blast_Score=72, Evalue=7e-14,
Organism=Escherichia coli, GI1789593, Length=241, Percent_Identity=23.6514522821577, Blast_Score=70, Evalue=2e-13,
Organism=Escherichia coli, GI1788761, Length=220, Percent_Identity=21.8181818181818, Blast_Score=69, Evalue=5e-13,
Organism=Escherichia coli, GI1789586, Length=216, Percent_Identity=25.9259259259259, Blast_Score=68, Evalue=6e-13,
Organism=Escherichia coli, GI1789032, Length=209, Percent_Identity=24.4019138755981, Blast_Score=68, Evalue=7e-13,
Organism=Escherichia coli, GI1789991, Length=216, Percent_Identity=24.537037037037, Blast_Score=67, Evalue=2e-12,
Organism=Escherichia coli, GI1786319, Length=242, Percent_Identity=23.1404958677686, Blast_Score=65, Evalue=8e-12,
Organism=Escherichia coli, GI1786872, Length=219, Percent_Identity=27.3972602739726, Blast_Score=63, Evalue=2e-11,
Organism=Caenorhabditis elegans, GI71983516, Length=216, Percent_Identity=29.6296296296296, Blast_Score=92, Evalue=3e-19,
Organism=Caenorhabditis elegans, GI71983510, Length=216, Percent_Identity=29.6296296296296, Blast_Score=92, Evalue=3e-19,
Organism=Caenorhabditis elegans, GI71983523, Length=216, Percent_Identity=29.6296296296296, Blast_Score=92, Evalue=3e-19,
Organism=Caenorhabditis elegans, GI17510237, Length=205, Percent_Identity=27.8048780487805, Blast_Score=92, Evalue=4e-19,
Organism=Drosophila melanogaster, GI24643674, Length=203, Percent_Identity=25.1231527093596, Blast_Score=82, Evalue=6e-16,
Organism=Drosophila melanogaster, GI221500365, Length=208, Percent_Identity=26.4423076923077, Blast_Score=79, Evalue=3e-15,
Organism=Drosophila melanogaster, GI24666092, Length=213, Percent_Identity=25.8215962441315, Blast_Score=77, Evalue=1e-14,
Organism=Drosophila melanogaster, GI116007184, Length=208, Percent_Identity=26.4423076923077, Blast_Score=77, Evalue=2e-14,
Organism=Drosophila melanogaster, GI28573573, Length=281, Percent_Identity=24.5551601423488, Blast_Score=75, Evalue=5e-14,
Organism=Drosophila melanogaster, GI28573571, Length=281, Percent_Identity=24.5551601423488, Blast_Score=75, Evalue=5e-14,
Organism=Drosophila melanogaster, GI28574150, Length=251, Percent_Identity=23.5059760956175, Blast_Score=75, Evalue=6e-14,
Organism=Drosophila melanogaster, GI116007328, Length=251, Percent_Identity=23.5059760956175, Blast_Score=75, Evalue=6e-14,
Organism=Drosophila melanogaster, GI221512771, Length=204, Percent_Identity=25.4901960784314, Blast_Score=74, Evalue=1e-13,
Organism=Drosophila melanogaster, GI24582014, Length=196, Percent_Identity=24.4897959183673, Blast_Score=73, Evalue=2e-13,
Organism=Drosophila melanogaster, GI24582012, Length=196, Percent_Identity=24.4897959183673, Blast_Score=73, Evalue=2e-13,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR003439
- InterPro:   IPR003593 [H]

Pfam domain/function: PF00005 ABC_tran [H]

EC number: NA

Molecular weight: Translated: 33885; Mature: 33885

Theoretical pI: Translated: 4.61; Mature: 4.61

Prosite motif: PS50893 ABC_TRANSPORTER_2

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.3 %Cys     (Translated Protein)
4.3 %Met     (Translated Protein)
5.6 %Cys+Met (Translated Protein)
1.3 %Cys     (Mature Protein)
4.3 %Met     (Mature Protein)
5.6 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MIEVKGVTKSFDDFTALDNVTCNIAEGCIYGMVGSNGAGKSTLLRVLSGIYKADKGEAII
CEEECCCCCCCHHHHHHCCCEEEECCCEEEEEECCCCCCHHHHHHHHHHHHCCCCCCEEE
DGINVYENTYMKNKLVFVADELFFLAGANMKSMAKFYSSIYDNFDMDRFAELTKTFGLDP
ECHHHHHHHHHHCEEEEEEHHHHHHCCCCHHHHHHHHHHHHCCCCHHHHHHHHHHHCCCC
SKSISNFSKGMKRQAAIILALSTRAKYMFFDETFDGLDPVMRNLVKKLICGDVAENNATV
CHHHHHHHHHHHHHEEEEEEEECCCEEEEECCCCCCHHHHHHHHHHHHHHCCCCCCCCEE
IVTSHSLRELEDLCDHLSLLHKGGLVLDSDVFELKTSQFKVQVAFKDDFDESKFEGIRIT
EEECHHHHHHHHHHHHHHHHHCCCEEEECCHHHEECCEEEEEEEECCCCCCCCCCCEEEE
RYRQEGSVANMIVSGDREQTMDIINAMNPVVFDVLPLTLEEVFTYEMEALGYTFDVKGDK
EEECCCCEEEEEEECCHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHCCEEEECCCCC
THE
CCC
>Mature Secondary Structure
MIEVKGVTKSFDDFTALDNVTCNIAEGCIYGMVGSNGAGKSTLLRVLSGIYKADKGEAII
CEEECCCCCCCHHHHHHCCCEEEECCCEEEEEECCCCCCHHHHHHHHHHHHCCCCCCEEE
DGINVYENTYMKNKLVFVADELFFLAGANMKSMAKFYSSIYDNFDMDRFAELTKTFGLDP
ECHHHHHHHHHHCEEEEEEHHHHHHCCCCHHHHHHHHHHHHCCCCHHHHHHHHHHHCCCC
SKSISNFSKGMKRQAAIILALSTRAKYMFFDETFDGLDPVMRNLVKKLICGDVAENNATV
CHHHHHHHHHHHHHEEEEEEEECCCEEEEECCCCCCHHHHHHHHHHHHHHCCCCCCCCEE
IVTSHSLRELEDLCDHLSLLHKGGLVLDSDVFELKTSQFKVQVAFKDDFDESKFEGIRIT
EEECHHHHHHHHHHHHHHHHHCCCEEEECCHHHEECCEEEEEEEECCCCCCCCCCCEEEE
RYRQEGSVANMIVSGDREQTMDIINAMNPVVFDVLPLTLEEVFTYEMEALGYTFDVKGDK
EEECCCCEEEEEEECCHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHCCEEEECCCCC
THE
CCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 7.0

TargetDB status: NA

Availability: NA

References: 9387221; 9384377 [H]