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The map label for this gene is yibD [H]

Identifier: 238916099

GI number: 238916099

Start: 157002

End: 158012

Strand: Direct

Name: yibD [H]

Synonym: EUBELI_00133

Alternate gene names: 238916099

Gene position: 157002-158012 (Clockwise)

Preceding gene: 238916098

Following gene: 238916100

Centisome position: 7.32

GC content: 28.59

Gene sequence:

>1011_bases
GTGGAGAAAAGTAAAGTGAAACAGACAGATATTAGTGTAATTATACCTGCACATAATGCATCCGATTATATCGAAAGAGC
TATAAAAAGTATTATTACGCAGACAGATATGTCGTGGGAGATTATTATTGTAGAGAATGGTTCAACGGATGATACATATA
TTAAAAGTATGAAATATGCTGAAAAATATTCTAATATAAATATCTTCCAAAGTGAAAAAGGTGTATCAAAGGCACGTAAT
TATGGATTGAAAAAAGCAACAGGAAAATGGATATGTTTTTTGGATGCAGATGATTATATTTATCCAGATGCTTTTAATGA
GATTTATAAATATATGGAAGATGAATCGGATTTGATATTATTTGGTCATAATAGTGAGACACATATGGTAAAAGGTAAAT
GTGTTAAATTTGATGGCAACGAGGAATATCAGAATTTAAGATGTGAAATGATAAAAAATCCTACACAGAATATGACAGTC
TGGGGAAAGCTTTTCAAACATCAGATTATTGAAAAGAATAAAATTGAATTTGATGAACAATTGGAACTGGCAGAAGATAG
TGATTTTACATTTCGATATATGCAGAATGCATCGAAAGCATTAAGAATTACTTCACAATTATATCATTACTCTAAAGATA
ATGCATCAACAGTTAGAACATACAAAGCAGGATCGGAAGAAAAGTACATTAAGTCTTTAAATCATACGAAAGAATATACG
ATAAAGGATACTAAGGAAATACAAGAAGCTTATAATCAGTATATAATAGCTAATTTATTGATTATATTAGTGCATGATAT
ATATTGTCACGAGAATCCTGAATCATCAAAACAAAGAAGAAATCATTTAAAGAAGTTAGTGCGGGAAAATATTTTTTCAG
AAGCAATTAAAAATATAAAATTTAGTGATTGCAGGAACATCAGGATGATACCAGCATTATGTCTCAAACTAAAAATGTAT
TTCTTAACTATTATTATGATTAAAATAAGAGTGTACCAGAATACAAAATGA

Upstream 100 bases:

>100_bases
CTTGGTGAGTATAAGTATTATGATATGGATACAACAATAGCTTCTGTTCTTGATAAATGTGAGAGTGTTTTTGGAAAATA
GTTGACTGGTATTAGGTAAA

Downstream 100 bases:

>100_bases
ATAAAAGGGACTTTATGATATGACAAATAATAGAATTATAAAGCTTGATATAGCGAGAACATTTGCAATAATATGTGTTG
TTCTTTGCCATTGCAGCCAG

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 336; Mature: 336

Protein sequence:

>336_residues
MEKSKVKQTDISVIIPAHNASDYIERAIKSIITQTDMSWEIIIVENGSTDDTYIKSMKYAEKYSNINIFQSEKGVSKARN
YGLKKATGKWICFLDADDYIYPDAFNEIYKYMEDESDLILFGHNSETHMVKGKCVKFDGNEEYQNLRCEMIKNPTQNMTV
WGKLFKHQIIEKNKIEFDEQLELAEDSDFTFRYMQNASKALRITSQLYHYSKDNASTVRTYKAGSEEKYIKSLNHTKEYT
IKDTKEIQEAYNQYIIANLLIILVHDIYCHENPESSKQRRNHLKKLVRENIFSEAIKNIKFSDCRNIRMIPALCLKLKMY
FLTIIMIKIRVYQNTK

Sequences:

>Translated_336_residues
MEKSKVKQTDISVIIPAHNASDYIERAIKSIITQTDMSWEIIIVENGSTDDTYIKSMKYAEKYSNINIFQSEKGVSKARN
YGLKKATGKWICFLDADDYIYPDAFNEIYKYMEDESDLILFGHNSETHMVKGKCVKFDGNEEYQNLRCEMIKNPTQNMTV
WGKLFKHQIIEKNKIEFDEQLELAEDSDFTFRYMQNASKALRITSQLYHYSKDNASTVRTYKAGSEEKYIKSLNHTKEYT
IKDTKEIQEAYNQYIIANLLIILVHDIYCHENPESSKQRRNHLKKLVRENIFSEAIKNIKFSDCRNIRMIPALCLKLKMY
FLTIIMIKIRVYQNTK
>Mature_336_residues
MEKSKVKQTDISVIIPAHNASDYIERAIKSIITQTDMSWEIIIVENGSTDDTYIKSMKYAEKYSNINIFQSEKGVSKARN
YGLKKATGKWICFLDADDYIYPDAFNEIYKYMEDESDLILFGHNSETHMVKGKCVKFDGNEEYQNLRCEMIKNPTQNMTV
WGKLFKHQIIEKNKIEFDEQLELAEDSDFTFRYMQNASKALRITSQLYHYSKDNASTVRTYKAGSEEKYIKSLNHTKEYT
IKDTKEIQEAYNQYIIANLLIILVHDIYCHENPESSKQRRNHLKKLVRENIFSEAIKNIKFSDCRNIRMIPALCLKLKMY
FLTIIMIKIRVYQNTK

Specific function: Unknown

COG id: COG0463

COG function: function code M; Glycosyltransferases involved in cell wall biogenesis

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the glycosyltransferase 2 family [H]

Homologues:

Organism=Escherichia coli, GI1790044, Length=261, Percent_Identity=31.4176245210728, Blast_Score=110, Evalue=1e-25,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR001173 [H]

Pfam domain/function: PF00535 Glycos_transf_2 [H]

EC number: 2.-.-.- [C]

Molecular weight: Translated: 39571; Mature: 39571

Theoretical pI: Translated: 8.49; Mature: 8.49

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.8 %Cys     (Translated Protein)
3.3 %Met     (Translated Protein)
5.1 %Cys+Met (Translated Protein)
1.8 %Cys     (Mature Protein)
3.3 %Met     (Mature Protein)
5.1 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MEKSKVKQTDISVIIPAHNASDYIERAIKSIITQTDMSWEIIIVENGSTDDTYIKSMKYA
CCCCCCCCCCEEEEEECCCHHHHHHHHHHHHHHHCCCCEEEEEEECCCCCHHHHHHHHHH
EKYSNINIFQSEKGVSKARNYGLKKATGKWICFLDADDYIYPDAFNEIYKYMEDESDLIL
HHHCCCEEEECCCCHHHHHHCCCCCCCCCEEEEECCCCCCCCHHHHHHHHHHCCCCCEEE
FGHNSETHMVKGKCVKFDGNEEYQNLRCEMIKNPTQNMTVWGKLFKHQIIEKNKIEFDEQ
EECCCCCEEEECEEEEECCCCHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHCCCCCCHHH
LELAEDSDFTFRYMQNASKALRITSQLYHYSKDNASTVRTYKAGSEEKYIKSLNHTKEYT
HCCCCCCCCHHHHHHHHHHHHHHHHHHHHCCCCCCCCEEEECCCCHHHHHHHHCCCCCCC
IKDTKEIQEAYNQYIIANLLIILVHDIYCHENPESSKQRRNHLKKLVRENIFSEAIKNIK
CCHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHCCC
FSDCRNIRMIPALCLKLKMYFLTIIMIKIRVYQNTK
CCCCCCCHHHHHHHHHHHHHHHHHHHHHHHEECCCC
>Mature Secondary Structure
MEKSKVKQTDISVIIPAHNASDYIERAIKSIITQTDMSWEIIIVENGSTDDTYIKSMKYA
CCCCCCCCCCEEEEEECCCHHHHHHHHHHHHHHHCCCCEEEEEEECCCCCHHHHHHHHHH
EKYSNINIFQSEKGVSKARNYGLKKATGKWICFLDADDYIYPDAFNEIYKYMEDESDLIL
HHHCCCEEEECCCCHHHHHHCCCCCCCCCEEEEECCCCCCCCHHHHHHHHHHCCCCCEEE
FGHNSETHMVKGKCVKFDGNEEYQNLRCEMIKNPTQNMTVWGKLFKHQIIEKNKIEFDEQ
EECCCCCEEEECEEEEECCCCHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHCCCCCCHHH
LELAEDSDFTFRYMQNASKALRITSQLYHYSKDNASTVRTYKAGSEEKYIKSLNHTKEYT
HCCCCCCCCHHHHHHHHHHHHHHHHHHHHCCCCCCCCEEEECCCCHHHHHHHHCCCCCCC
IKDTKEIQEAYNQYIIANLLIILVHDIYCHENPESSKQRRNHLKKLVRENIFSEAIKNIK
CCHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHCCC
FSDCRNIRMIPALCLKLKMYFLTIIMIKIRVYQNTK
CCCCCCCHHHHHHHHHHHHHHHHHHHHHHHEECCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 8041620; 9278503; 2647748 [H]