| Definition | Eubacterium eligens ATCC 27750 chromosome, complete genome. |
|---|---|
| Accession | NC_012778 |
| Length | 2,144,190 |
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The map label for this gene is 238916089
Identifier: 238916089
GI number: 238916089
Start: 142373
End: 143353
Strand: Direct
Name: 238916089
Synonym: EUBELI_00123
Alternate gene names: NA
Gene position: 142373-143353 (Clockwise)
Preceding gene: 238916088
Following gene: 238916090
Centisome position: 6.64
GC content: 42.3
Gene sequence:
>981_bases ATGAAGAGACGGATAGTAAGTGCAGGATTTGTGTTAATAATAACTGCGTGCATGTGGATAAGTATGACCACATTTGCAGC AGATGTGGATATTAAAGCAGAGAGTGAAGACAAGGGGTATGTGTATTGCGAGAGTGGAGAGCAGGCACTTGCCAAAGTGA ATGAGTATCTTGATGATGTATGCTGGGATGACAGGACGGGGATATATGTTGTTTATCCGGGAAATGATGTGTCAGGAAGT GTTACGGTTAATAATAATCACAGCATTGCGGATTCTTATGCGGATTTTATATTTGATGTACAGGTAAGTAATGAGAAGAT AACGCTGCAAGGAGCTGGGTATAATCTTTTGAATGTGAAGAGATGTGCTTATGAGACACATTCATATGGTCTTACAAGGG AGCAGGCACTGGAGGCAGACGCAGTTGCAGATGAGATAGTGAACAAATGCAATGCAGAAAGTACTTTGGACAAAATAAGC TATATATATAATTATTTGTGTGAAAATGTGGTTTATGACAGTGCATATGAATTTGGCAGCATATATGATGCACTGGTCGG TGGAAAAACTGTGTGCTCCGGTTATGCTGCCGCATTCCAGGTGATGATGGAAAAGCTGGGGATACCCTGTAAAATTATGG CGGGAAATGTTAATGGAACAGCACATGCGTGGAATGCAGTAAATGTATCTGGTAAATGGTATTATGTTGATGCAACATTT GCGAATACGATGGGCATGCGCGCTGATTATCTGTTATTTGGAAGTGACAGACGCGCTGACGTTTATGGAATTGGGGTTGT CGGCCGAGATTATGATAGTAGTGATGAGACAGTTGCAGAAGAAGTCTCTGAGAATATAGATGATAATGGCAATGAAGCTG ATAAGAACAGTCTGGTATATGTGGCTGTCATTGCTGCTGGAGTGCTGGCTGCTGGCGCTGCGGCTGGATGGGGAGTTTTG AGGAAGAGGAATAAAATGTGA
Upstream 100 bases:
>100_bases TTAATACAGCAGAATGAAAACTAAATAATCTATAGTATTAAATTCCTGAGGAGTATATAATATATACGACTCAGGAATTT TTTTAGGGGATTATATTATT
Downstream 100 bases:
>100_bases AAAAATAGACGGAAATATTATTTATTTTCCCCCAATATGATGATATAGTAAGAAAAAACGAATGTAACAATTAACTGTAG ACAAAGAATAAAATGAGGTA
Product: hypothetical protein
Products: NA
Alternate protein names: Lipoprotein; S-Layer Protein; Transglutaminase Domain Protein; Protease; S-Layer Domain Protein; S-Layer Domain-Containing Protein; Bacterial Ig-Like Domain; Protein Involved In Cytokinesis Contains TGc Domain
Number of amino acids: Translated: 326; Mature: 326
Protein sequence:
>326_residues MKRRIVSAGFVLIITACMWISMTTFAADVDIKAESEDKGYVYCESGEQALAKVNEYLDDVCWDDRTGIYVVYPGNDVSGS VTVNNNHSIADSYADFIFDVQVSNEKITLQGAGYNLLNVKRCAYETHSYGLTREQALEADAVADEIVNKCNAESTLDKIS YIYNYLCENVVYDSAYEFGSIYDALVGGKTVCSGYAAAFQVMMEKLGIPCKIMAGNVNGTAHAWNAVNVSGKWYYVDATF ANTMGMRADYLLFGSDRRADVYGIGVVGRDYDSSDETVAEEVSENIDDNGNEADKNSLVYVAVIAAGVLAAGAAAGWGVL RKRNKM
Sequences:
>Translated_326_residues MKRRIVSAGFVLIITACMWISMTTFAADVDIKAESEDKGYVYCESGEQALAKVNEYLDDVCWDDRTGIYVVYPGNDVSGS VTVNNNHSIADSYADFIFDVQVSNEKITLQGAGYNLLNVKRCAYETHSYGLTREQALEADAVADEIVNKCNAESTLDKIS YIYNYLCENVVYDSAYEFGSIYDALVGGKTVCSGYAAAFQVMMEKLGIPCKIMAGNVNGTAHAWNAVNVSGKWYYVDATF ANTMGMRADYLLFGSDRRADVYGIGVVGRDYDSSDETVAEEVSENIDDNGNEADKNSLVYVAVIAAGVLAAGAAAGWGVL RKRNKM >Mature_326_residues MKRRIVSAGFVLIITACMWISMTTFAADVDIKAESEDKGYVYCESGEQALAKVNEYLDDVCWDDRTGIYVVYPGNDVSGS VTVNNNHSIADSYADFIFDVQVSNEKITLQGAGYNLLNVKRCAYETHSYGLTREQALEADAVADEIVNKCNAESTLDKIS YIYNYLCENVVYDSAYEFGSIYDALVGGKTVCSGYAAAFQVMMEKLGIPCKIMAGNVNGTAHAWNAVNVSGKWYYVDATF ANTMGMRADYLLFGSDRRADVYGIGVVGRDYDSSDETVAEEVSENIDDNGNEADKNSLVYVAVIAAGVLAAGAAAGWGVL RKRNKM
Specific function: Unknown
COG id: COG5279
COG function: function code D; Uncharacterized protein involved in cytokinesis, contains TGc (transglutaminase/protease-like) domain
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 35552; Mature: 35552
Theoretical pI: Translated: 4.25; Mature: 4.25
Prosite motif: PS00013 PROKAR_LIPOPROTEIN ; PS00678 WD_REPEATS_1
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
2.5 %Cys (Translated Protein) 2.8 %Met (Translated Protein) 5.2 %Cys+Met (Translated Protein) 2.5 %Cys (Mature Protein) 2.8 %Met (Mature Protein) 5.2 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MKRRIVSAGFVLIITACMWISMTTFAADVDIKAESEDKGYVYCESGEQALAKVNEYLDDV CCCEEECCCHHHHHHHHHHHHHHHHEEEEEEEECCCCCCEEEECCCHHHHHHHHHHHHHH CWDDRTGIYVVYPGNDVSGSVTVNNNHSIADSYADFIFDVQVSNEKITLQGAGYNLLNVK CCCCCCCEEEEECCCCCCEEEEECCCCCHHHHHCCEEEEEEECCCEEEEEECCCCEEEHH RCAYETHSYGLTREQALEADAVADEIVNKCNAESTLDKISYIYNYLCENVVYDSAYEFGS HHHHHHHCCCCCHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHCCHHHHHH IYDALVGGKTVCSGYAAAFQVMMEKLGIPCKIMAGNVNGTAHAWNAVNVSGKWYYVDATF HHHHHHCCHHHHHHHHHHHHHHHHHHCCCEEEEECCCCCCEEEEEEEEECCEEEEEEEEH ANTMGMRADYLLFGSDRRADVYGIGVVGRDYDSSDETVAEEVSENIDDNGNEADKNSLVY HHCCCCCEEEEEECCCCCCEEEEEEEEECCCCCCCHHHHHHHHHCCCCCCCCCCCCCEEE VAVIAAGVLAAGAAAGWGVLRKRNKM HHHHHHHHHHHCCHHHHHHHHHCCCC >Mature Secondary Structure MKRRIVSAGFVLIITACMWISMTTFAADVDIKAESEDKGYVYCESGEQALAKVNEYLDDV CCCEEECCCHHHHHHHHHHHHHHHHEEEEEEEECCCCCCEEEECCCHHHHHHHHHHHHHH CWDDRTGIYVVYPGNDVSGSVTVNNNHSIADSYADFIFDVQVSNEKITLQGAGYNLLNVK CCCCCCCEEEEECCCCCCEEEEECCCCCHHHHHCCEEEEEEECCCEEEEEECCCCEEEHH RCAYETHSYGLTREQALEADAVADEIVNKCNAESTLDKISYIYNYLCENVVYDSAYEFGS HHHHHHHCCCCCHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHCCHHHHHH IYDALVGGKTVCSGYAAAFQVMMEKLGIPCKIMAGNVNGTAHAWNAVNVSGKWYYVDATF HHHHHHCCHHHHHHHHHHHHHHHHHHCCCEEEEECCCCCCEEEEEEEEECCEEEEEEEEH ANTMGMRADYLLFGSDRRADVYGIGVVGRDYDSSDETVAEEVSENIDDNGNEADKNSLVY HHCCCCCEEEEEECCCCCCEEEEEEEEECCCCCCCHHHHHHHHHCCCCCCCCCCCCCEEE VAVIAAGVLAAGAAAGWGVLRKRNKM HHHHHHHHHHHCCHHHHHHHHHCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA